COEL: A Web-based Chemistry Simulation Framework

The chemical reaction network (CRN) is a widely used formalism to describe macroscopic behavior of chemical systems. Available tools for CRN modelling and simulation require local access, installation, and often involve local file storage, which is susceptible to loss, lacks searchable structure, and does not support concurrency. Furthermore, simulations are often single-threaded, and user interfaces are non-trivial to use. Therefore there are significant hurdles to conducting efficient and collaborative chemical research. In this paper, we introduce a new enterprise chemistry simulation framework, COEL, which addresses these issues. COEL is the first web-based framework of its kind. A visually pleasing and intuitive user interface, simulations that run on a large computational grid, reliable database storage, and transactional services make COEL ideal for collaborative research and education. COEL's most prominent features include ODE-based simulations of chemical reaction networks and multicompartment reaction networks, with rich options for user interactions with those networks. COEL provides DNA-strand displacement transformations and visualization (and is to our knowledge the first CRN framework to do so), GA optimization of rate constants, expression validation, an application-wide plotting engine, and SBML/Octave/Matlab export. We also present an overview of the underlying software and technologies employed and describe the main architectural decisions driving our development. COEL is available at http://coel-sim.org for selected research teams only. We plan to provide a part of COEL's functionality to the general public in the near future.Comment: 23 pages, 12 figures, 1 tabl

Automated user modeling for personalized digital libraries

Digital libraries (DL) have become one of the most typical ways of accessing any kind of digitalized information. Due to this key role, users welcome any improvements on the services they receive from digital libraries. One trend used to improve digital services is through personalization. Up to now, the most common approach for personalization in digital libraries has been user-driven. Nevertheless, the design of efficient personalized services has to be done, at least in part, in an automatic way. In this context, machine learning techniques automate the process of constructing user models. This paper proposes a new approach to construct digital libraries that satisfy user’s necessity for information: Adaptive Digital Libraries, libraries that automatically learn user preferences and goals and personalize their interaction using this information

Cross-system recommendation: user-modelling via social media versus self-declared preferences

It is increasingly rare to encounter a Web service that doesn’t engage in some form of automated recommendation, with Collaborative Filtering (CF) techniques being virtually ubiquitous as the means for delivering relevant content. Yet several key issues still remain unresolved, including optimal handling of cold starts and how best to maintain user privacy within that context. Recent work has demonstrated a potentially fruitful line of attack in the form of cross system user modelling, which uses features generated from one domain to bootstrap recommendations in another. In this paper we evidence the effectiveness of this approach through direct real-world user feedback, deconstructing a cross-system news recommendation service where user models are generated via social media data. It is shown that even when a relatively naive vector-space approach is used, it is possible to automatically generate user-models that provide statistically superior performance than when items are explicitly filtered based on a user’s self-declared preferences. Detailed qualitative analysis of why such effects occur indicate that different models are capturing widely different areas within a user’s preference space, and that hybrid models represent fertile ground for future research

THE USE OF RECOMMENDER SYSTEMS IN WEB APPLICATIONS – THE TROI CASE

Avoiding digital marketing, surveys, reviews and online users behavior approaches on digital age are the key elements for a powerful businesses to fail, there are some systems that should preceded some artificial intelligence techniques. In this direction, the use of data mining for recommending relevant items as a new state of the art technique is increasing user satisfaction as well as the business revenues. And other related information gathering approaches in order to our systems thing and acts like humans. To do so there is a Recommender System that will be elaborated in this thesis. How people interact, how to calculate accurately and identify what people like or dislike based on their online previous behaviors. The thesis includes also the methodologies recommender system uses, how math equations helps Recommender Systems to calculate user’s behavior and similarities. The filters are important on Recommender System, explaining if similar users like the same product or item, which is the probability of neighbor user to like also. Here comes collaborative filters, neighborhood filters, hybrid recommender system with the use of various algorithms the Recommender Systems has the ability to predict whether a particular user would prefer an item or not, based on the user’s profile and their activities. The use of Recommender Systems are beneficial to both service providers and users. Thesis cover also the strength and weaknesses of Recommender Systems and how involving Ontology can improve it. Ontology-based methods can be used to reduce problems that content-based recommender systems are known to suffer from. Based on Kosovar’s GDP and youngsters job perspectives are desirable for improvements, the demand is greater than the offer. I thought of building an intelligence system that will be making easier for Kosovars to find the appropriate job that suits their profile, skills, knowledge, character and locations. And that system is called TROI Search engine that indexes and merge all local operating job seeking websites in one platform with intelligence features. Thesis will present the design, implementation, testing and evaluation of a TROI search engine. Testing is done by getting user experiments while using running environment of TROI search engine. Results show that the functionality of the recommender system is satisfactory and helpful

The Use of Clustering Methods in Memory-Based Collaborative Filtering for Ranking-Based Recommendation Systems

This research explores the application of clustering techniques and frequency normalization in collaborative filtering to enhance the performance of ranking-based recommendation systems. Collaborative filtering is a popular approach in recommendation systems that relies on user-item interaction data. In ranking-based recommendation systems, the goal is to provide users with a personalized list of items, sorted by their predicted relevance. In this study, we propose a novel approach that combines clustering and frequency normalization techniques. Clustering, in the context of data analysis, is a technique used to organize and group together users or items that share similar characteristics or features. This method proves beneficial in enhancing recommendation accuracy by uncovering hidden patterns within the data. Additionally, frequency normalization is utilized to mitigate potential biases in user-item interaction data, ensuring fair and unbiased recommendations. The research methodology involves data preprocessing, clustering algorithm selection, frequency normalization techniques, and evaluation metrics. Experimental results demonstrate that the proposed method outperforms traditional collaborative filtering approaches in terms of ranking accuracy and recommendation quality. This approach has the potential to enhance recommendation systems across various domains, including e-commerce, content recommendation, and personalized advertising

Liquid Journals: Knowledge Dissemination in the Web Era

In this paper we redefine the notion of "scientific journal" to update it to the age of the Web. We explore the historical reasons behind the current journal model, and we show that this model is essentially the same today, even if the Web has made dissemination essentially free. We propose a notion of liquid and personal journals that evolve continuously in time and that are targeted to serve individuals or communities of arbitrarily small or large scales. The liquid journals provide "interesting" content, in the form of "scientific contributions" that are "related" to a certain paper, topic, or area, and that are posted (on their web site, repositories, traditional journals) by "inspiring" researchers. As such, the liquid journal separates the notion of "publishing" (which can be achieved by submitting to traditional peer review journals or just by posting content on the Web) from the appearance of contributions into the journals, which are essentially collections of content. In this paper we introduce the liquid journal model, and demonstrate through some examples its value to individuals and communities. Finally, we describe an architecture and a working prototype that implements the proposed model

Collaborative-demographic hybrid for financial: product recommendation

Internship Report presented as the partial requirement for obtaining a Master's degree in Data Science and Advanced AnalyticsDue to the increased availability of mature data mining and analysis technologies supporting CRM processes, several financial institutions are striving to leverage customer data and integrate insights regarding customer behaviour, needs, and preferences into their marketing approach. As decision support systems assisting marketing and commercial efforts, Recommender Systems applied to the financial domain have been gaining increased attention. This thesis studies a Collaborative- Demographic Hybrid Recommendation System, applied to the financial services sector, based on real data provided by a Portuguese private commercial bank. This work establishes a framework to support account managers’ advice on which financial product is most suitable for each of the bank’s corporate clients. The recommendation problem is further developed by conducting a performance comparison for both multi-output regression and multiclass classification prediction approaches. Experimental results indicate that multiclass architectures are better suited for the prediction task, outperforming alternative multi-output regression models on the evaluation metrics considered. Withal, multiclass Feed-Forward Neural Networks, combined with Recursive Feature Elimination, is identified as the topperforming algorithm, yielding a 10-fold cross-validated F1 Measure of 83.16%, and achieving corresponding values of Precision and Recall of 84.34%, and 85.29%, respectively. Overall, this study provides important contributions for positioning the bank’s commercial efforts around customers’ future requirements. By allowing for a better understanding of customers’ needs and preferences, the proposed Recommender allows for more personalized and targeted marketing contacts, leading to higher conversion rates, corporate profitability, and customer satisfaction and loyalty

COEL: A Cloud-Based Reaction Network Simulator

Chemical Reaction Networks (CRNs) are a formalism to describe the macroscopic behavior of chemical systems. We introduce COEL, a web- and cloud-based CRN simulation framework, which does not require a local installation, runs simulations on a large computational grid, provides reliable database storage, and offers a visually pleasing and intuitive user interface. We present an overview of the underlying software, the technologies, and the main architectural approaches employed. Some of COEL’s key features include ODE-based simulations of CRNs and multicompartment reaction networks with rich interaction options, a built-in plotting engine, automatic DNA-strand displacement transformation and visualization, SBML/Octave/Matlab export, and a built-in genetic-algorithm- based optimization toolbox for rate constants. COEL is an open-source project hosted on GitHub (doi:10.5281/zenodo.46544), which allows interested research groups to deploy it on their own sever. Regular users can simply use the web instance at no cost at coel-sim.org. The framework is ideally suited for a collaborative use in both research and education