Biodiversity informatics : organizing and linking information across the spectrum of life

This article has been accepted for publication in Briefings in Bioinformatics © 2007 The Author Published by Oxford University Press. All rights reserved. This is a pre-print, electronic version of an article published in Briefings in Bioinformatics 8 (2007) 347-357, doi:10.1093/bib/bbm037Biological knowledge can be inferred from three major levels of information: molecules, organisms, and ecologies. Bioinformatics is an established field that has made significant advances in the development of systems and techniques to organize contemporary molecular data; biodiversity informatics is an emerging discipline that strives to develop methods to organize knowledge at the organismal level extending back to the earliest dates of recorded natural history. Furthermore, while bioinformatics studies generally focus on detailed examinations of key “model” organisms, biodiversity informatics aims to develop over-arching hypotheses that span the entire tree of life. Biodiversity informatics is presented here as a discipline that unifies biological information from a range of contemporary and historical sources across the spectrum of life using organisms as the linking thread. The present review primarily focuses on the use of organism names as a universal meta-data element to link and integrate biodiversity data across a range of data sources

If you build it will they come? Services will make the difference in a portal

ManuscriptAbstract: Identifying and adding services to a library portal will add to its long term success in a market that pits libraries against commercial vendors like Google and Amazon.com. The current focus on portals has been on selecting collections and developing the basic functionality of the website. We look at the added features needed in order to make this a product that is attractive to today's researcher

Dynamic Update Techniques for Online Maps and Attributes Data

Online databases containing geographic and related tabular data for maps and attributes often require continuous updates from widely distributed sources afield. For some applications, these data are dynamic, and thus are of little value if they do not reflect the latest information or changes. A status map that depicts graphically temporal data affecting accountability is an example of this type of data. How can accommodations be made collectively for the perpetual data updates in the database and the need to deliver online information in real time without making concessions? The goal of the dissertation was to analyze and evaluate techniques and technology for data collection and storage, online data delivery, and real-time upload. The result of this analysis culminated in the design and prototype of a system that allowed real-time delivery of up-to-date maps and attributes information. A literature review revealed that an ample amount of research material existed on the theory and practice of developing dynamic update techniques. Despite that fact, no research literature was available that specifically dealt with dynamic update techniques that provide for real-time delivery of up-to-date maps while allowing online update of attributes information. This dissertation was the first attempt at providing research material in this important area. The procedure consisted of five major steps encompassing a number of small steps, and culminated in the development of a prototype. The steps included gathering data collection and storage information, investigating technological advances in data delivery and access, studying dynamic update techniques, assessing the feasibility of an implementation solution, and developing a prototype. The results revealed that the dynamic update technique as implemented in the prototype met the need for timely delivery of accountability, geospatial, and metadata information within an infrastructure

Scholarly Electronic Publishing Bibliography: 2007 Annunal Edition

This bibliography lists citations of English-language articles, books and other printed and electronic sources that are useful in understanding scholarly electronic publishing efforts on the Internet. Most sources have been published from 1990 through 2007; however, a limited number of key sources published prior to 1990 are also included

Scholarly Electronic Publishing Bibliography: 2008 Annunal Edition

This bibliography lists citations of English-language articles, books and other printed and electronic sources that are useful in understanding scholarly electronic publishing efforts on the Internet. Most sources have been published from 1990 through 2008; however, a limited number of key sources published prior to 1990 are also included

The Scholarly Electronic Publishing Bibliography: 2008 Annual Edition

The Scholarly Electronic Publishing Bibliography: 2008 Annual Edition presents over 3,350 English-language articles, books, and other printed and electronic sources that are useful in understanding scholarly electronic publishing efforts on the Internet. Most sources have been published from 1990 through 2008; however, a limited number of key sources published prior to 1990 are also included. Where possible, links are provided to works that are freely available on the Internet, including e-prints in disciplinary archives and institutional repositories. It is available under a Creative Commons Attribution-Noncommercial 3.0 United States License

Scholarly Electronic Publishing Bibliography 2010

The Scholarly Electronic Publishing Bibliography 2010 presents over 3,800 selected English-language articles, books, and other textual sources that are useful in understanding scholarly electronic publishing efforts on the Internet. It covers digital copyright, digital libraries, digital preservation, digital rights management, digital repositories, economic issues, electronic books and texts, electronic serials, license agreements, metadata, publisher issues, open access, and other related topics. Most sources have been published from 1990 through 2010. Many references have links to freely available copies of included works. It is under a Creative Commons Attribution-Noncommercial 3.0 United States License. Cite as: Bailey, Charles W., Jr. Scholarly Electronic Publishing Bibliography 2010. Houston: Digital Scholarship, 2011

Digital Scholarship 2009

The work is a bibliography of digital scholarship containing citations of articles, books, and technical reports on institutional repositories and scholarly electronic publishin

Metadatos y recuperación de información: estándares, problemas y aplicabilidad en bibliotecas digitales

Programa de Doctorado en DocumentaciónPresidente: Mercedes Caridad Sebastián. - Secretario: Antonio Hernández Pérez. - Vocales: José Carlos Rovira Soler, Eulalia Fuentes i Pujol, José Antonio Gómez Hernánde

Federated search of scientific literature

The Illinois Digital Library Project has developed an infrastructure for federated repositories. The deployed testbed indexes articles from many scientific journals and publishers in a production stream that can be searched as though they form a single collection.published or submitted for publicationis peer reviewe