Automaták, fák és logika = Automata, trees and logic

Elemi idejű exponenciális algoritmus adtunk meg reguláris szavak ekvivalenciájának eldönthetőségére. Általánosítottuk Kleene tételét végtelen szavakat is felismerő súlyozott automatákra. Kifejlesztettünk egy algebrai módszert, amellyel a CTL logika számos szegmense estén eldönthető, hogy egy reguláris fanyelv definiálható-e a szegmensben. Vizsgáltuk a faautomaták algebrai tulajdonságait, megadtuk a felismerhetőség egy algebrai jellemzését. Definiáltunk a multi-leszálló fatranszformátort és megmutattuk, hogy ekvivalens a determinisztikus reguláris szűkítésű felszálló fatranszformátorral. Meghatároztuk a lineáris multi-leszálló osztály számítási erejét. Megmutattuk, hogy az alakmegőrző leszálló fatranszformátorok ekvivalensek az átcímkézőkkel és bebizonyítottuk, hogy az alakmegőrző tulajdonság eldönthető. Megadtuk a kavics makró fatranszformációk egy felbontását és megmutattuk, hogy a különböző cirkularitási tulajdonságok eldönthetők. Ugyancsak megadtuk a felbontást erős kavics kezelés estén is. Általánosítottuk J. Engelfriet hiararchia tételét súlyozott fatranszformátorokra. Súlyozott faautomatákra definiáltuk a termátíró szemantikát és megmutattuk, hogy ekvivalens az algebari szenmatikával. Algoritmust adtunk annak eldöntésére, hogy egy polinomiálisan súlyozott faautomata véges költségű-e. Vizsgáltuk a súlyozott faautomata különböző változatait: fuzzy faautomata, multioperátor monoid feletti faautomata, Ez utóbbi esetre általánosítottuk a Kleene tételt. | We gave an elementary algorithm for deciding the equivalence of regular words. We generalized Kleene's theorem to weighted automata processing infinite words. We developed an algebraic method that, for several segments of the CTL logic, can be applied to decide if a regular tree language can be defined in that segment. We examined algebraic properties of tree automata, and gave an algebraic characterization of recognizability. We defined multi bottom-up tree transducers and showed that they are equivalent to top-down tree transducers with regular look-ahead. We determined the computation power of the linear subclass. We showed that shape preserving bottom-up tree transducers are equivalent to relabelings. We proved that the shape preserving property is decidable. We gave a decomposition for pebble macro tree transducers and showed that certain circularity properties are decidable. We also gave a decomposition for the strong pebble handling. We have generalized the hierarchy theorem of J. Engelfriet to weighted tree transducers. We defined the term rewrite semantics of weighted tree transducers and showed that it is equivalent to the algebraic semantics. We gave a decision algorithm for the finite cost property of a polynomially weighted tree automata. We defined different versions of weighted tree automata: fuzzy tree automata, weighted tree automata over a multioperator monoid. For the latter we generalized Kleene's theorem

Test-Case Generation for Embedded Binary Code Using Abstract Interpretation

This paper describes a framework for test-case generation for microcontroller binary programs using abstract interpretation techniques. The key idea of our approach is to derive program invariants a priori, and then use backward analysis to obtain test vectors that are executed on the target microcontroller. Due to the structure of binary code, the abstract interpretation framework is based on propositional encodings of the program semantics and SAT solving

EF+EX Forest Algebras

We examine languages of unranked forests definable using the temporal operators EF and EX. We characterize the languages definable in this logic, and various fragments thereof, using the syntactic forest algebras introduced by Bojanczyk and Walukiewicz. Our algebraic characterizations yield efficient algorithms for deciding when a given language of forests is definable in this logic. The proofs are based on understanding the wreath product closures of a few small algebras, for which we introduce a general ideal theory for forest algebras. This combines ideas from the work of Bojanczyk and Walukiewicz for the analogous logics on binary trees and from early work of Stiffler on wreath product of finite semigroups

Logics for Unranked Trees: An Overview

Labeled unranked trees are used as a model of XML documents, and logical languages for them have been studied actively over the past several years. Such logics have different purposes: some are better suited for extracting data, some for expressing navigational properties, and some make it easy to relate complex properties of trees to the existence of tree automata for those properties. Furthermore, logics differ significantly in their model-checking properties, their automata models, and their behavior on ordered and unordered trees. In this paper we present a survey of logics for unranked trees

Model Checking Timed Recursive CTL

We introduce Timed Recursive CTL, a merger of two extensions of the well-known branching-time logic CTL: Timed CTL is interpreted over real-time systems like timed automata; Recursive CTL introduces a powerful recursion operator which takes the expressiveness of this logic CTL well beyond that of regular properties. The result is an expressive logic for real-time properties. We show that its model checking problem is decidable over timed automata, namely 2-EXPTIME-complete

Temporalized logics and automata for time granularity

Suitable extensions of the monadic second-order theory of k successors have been proposed in the literature to capture the notion of time granularity. In this paper, we provide the monadic second-order theories of downward unbounded layered structures, which are infinitely refinable structures consisting of a coarsest domain and an infinite number of finer and finer domains, and of upward unbounded layered structures, which consist of a finest domain and an infinite number of coarser and coarser domains, with expressively complete and elementarily decidable temporal logic counterparts. We obtain such a result in two steps. First, we define a new class of combined automata, called temporalized automata, which can be proved to be the automata-theoretic counterpart of temporalized logics, and show that relevant properties, such as closure under Boolean operations, decidability, and expressive equivalence with respect to temporal logics, transfer from component automata to temporalized ones. Then, we exploit the correspondence between temporalized logics and automata to reduce the task of finding the temporal logic counterparts of the given theories of time granularity to the easier one of finding temporalized automata counterparts of them.Comment: Journal: Theory and Practice of Logic Programming Journal Acronym: TPLP Category: Paper for Special Issue (Verification and Computational Logic) Submitted: 18 March 2002, revised: 14 Januari 2003, accepted: 5 September 200

STL-based Analysis of TRAIL-induced Apoptosis Challenges the Notion of Type I/Type II Cell Line Classification

Extrinsic apoptosis is a programmed cell death triggered by external ligands, such as the TNF-related apoptosis inducing ligand (TRAIL). Depending on the cell line, the specific molecular mechanisms leading to cell death may significantly differ. Precise characterization of these differences is crucial for understanding and exploiting extrinsic apoptosis. Cells show distinct behaviors on several aspects of apoptosis, including (i) the relative order of caspases activation, (ii) the necessity of mitochondria outer membrane permeabilization (MOMP) for effector caspase activation, and (iii) the survival of cell lines overexpressing Bcl2. These differences are attributed to the activation of one of two pathways, leading to classification of cell lines into two groups: type I and type II. In this work we challenge this type I/type II cell line classification. We encode the three aforementioned distinguishing behaviors in a formal language, called signal temporal logic (STL), and use it to extensively test the validity of a previously-proposed model of TRAIL-induced apoptosis with respect to experimental observations made on different cell lines. After having solved a few inconsistencies using STL-guided parameter search, we show that these three criteria do not define consistent cell line classifications in type I or type II, and suggest mutants that are predicted to exhibit ambivalent behaviors. In particular, this finding sheds light on the role of a feedback loop between caspases, and reconciliates two apparently-conflicting views regarding the importance of either upstream or downstream processes for cell-type determination. More generally, our work suggests that these three distinguishing behaviors should be merely considered as type I/II features rather than cell-type defining criteria. On the methodological side, this work illustrates the biological relevance of STL-diagrams, STL population data, and STL-guided parameter search implemented in the tool Breach. Such tools are well-adapted to the ever-increasing availability of heterogeneous knowledge on complex signal transduction pathways

On independence-friendly fixpoint logics

Nous introduisons une extension aux points fixes de la logique IF (faite pour l’indépendance) de Hintikka et Sandu. Nous donnons des résultats sur sa complexité et son pouvoir expressif. Nous la relions aux jeux de parité à information imparfaite, et nous montrons une application à la définition d’un mu-calcul modal fait pour l’indépendance.We introduce a fixpoint extension of Hintikka and Sandu’s IF (independence-friendly) logic. We obtain some results on its complexity and expressive power. We relate it to parity games of imperfect information, and show its application to defining independence-friendly modal mu-calculi

Encapsulating deontic and branching time specifications

In this paper, we investigate formal mechanisms to enable designers to decompose specifications (stated in a given logic) into several interacting components in such a way that the composition of these components preserves their encapsulation and internal non-determinism. The preservation of encapsulation (or locality) enables a modular form of reasoning over specifications, while the conservation of the internal non-determinism is important to guarantee that the branching time properties of components are not lost when the entire system is obtained. The basic ideas come from the work of Fiadeiro and Maibaum where notions from category theory are used to structure logical specifications. As the work of Fiadeiro and Maibaum is stated in a linear temporal logic, here we investigate how to extend these notions to a branching time logic, which can be used to reason about systems where non-determinism is present. To illustrate the practical applications of these ideas, we introduce deontic operators in our logic and we show that the modularization of specifications also allows designers to maintain the encapsulation of deontic prescriptions; this is in particular useful to reason about fault-tolerant systems, as we demonstrate with a small example.Fil: Castro, Pablo Francisco. Universidad Nacional de Río Cuarto; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba; ArgentinaFil: Maibaum, Thomas S. E.. Mc Master University; Canad

Regular Languages Definable by Lindström Quantifiers

In our main result, we establish a formal connection between Lindström quantifiers with respect to regular languages and the double semidirect product of finite monoids with a distinguished set of generators. We use this correspondence to characterize the expressive power of Lindström quantifiers associated with a class of regular languages