785 research outputs found
Multicore-optimized wavefront diamond blocking for optimizing stencil updates
The importance of stencil-based algorithms in computational science has
focused attention on optimized parallel implementations for multilevel
cache-based processors. Temporal blocking schemes leverage the large bandwidth
and low latency of caches to accelerate stencil updates and approach
theoretical peak performance. A key ingredient is the reduction of data traffic
across slow data paths, especially the main memory interface. In this work we
combine the ideas of multi-core wavefront temporal blocking and diamond tiling
to arrive at stencil update schemes that show large reductions in memory
pressure compared to existing approaches. The resulting schemes show
performance advantages in bandwidth-starved situations, which are exacerbated
by the high bytes per lattice update case of variable coefficients. Our thread
groups concept provides a controllable trade-off between concurrency and memory
usage, shifting the pressure between the memory interface and the CPU. We
present performance results on a contemporary Intel processor
Pervasive Parallel And Distributed Computing In A Liberal Arts College Curriculum
We present a model for incorporating parallel and distributed computing (PDC) throughout an undergraduate CS curriculum. Our curriculum is designed to introduce students early to parallel and distributed computing topics and to expose students to these topics repeatedly in the context of a wide variety of CS courses. The key to our approach is the development of a required intermediate-level course that serves as a introduction to computer systems and parallel computing. It serves as a requirement for every CS major and minor and is a prerequisite to upper-level courses that expand on parallel and distributed computing topics in different contexts. With the addition of this new course, we are able to easily make room in upper-level courses to add and expand parallel and distributed computing topics. The goal of our curricular design is to ensure that every graduating CS major has exposure to parallel and distributed computing, with both a breadth and depth of coverage. Our curriculum is particularly designed for the constraints of a small liberal arts college, however, much of its ideas and its design are applicable to any undergraduate CS curriculum
CoreTSAR: Task Scheduling for Accelerator-aware Runtimes
Heterogeneous supercomputers that incorporate computational accelerators
such as GPUs are increasingly popular due to their high
peak performance, energy efficiency and comparatively low cost.
Unfortunately, the programming models and frameworks designed
to extract performance from all computational units still lack the
flexibility of their CPU-only counterparts. Accelerated OpenMP
improves this situation by supporting natural migration of OpenMP
code from CPUs to a GPU. However, these implementations currently
lose one of OpenMP’s best features, its flexibility: typical
OpenMP applications can run on any number of CPUs. GPU implementations
do not transparently employ multiple GPUs on a node
or a mix of GPUs and CPUs. To address these shortcomings, we
present CoreTSAR, our runtime library for dynamically scheduling
tasks across heterogeneous resources, and propose straightforward
extensions that incorporate this functionality into Accelerated
OpenMP. We show that our approach can provide nearly linear
speedup to four GPUs over only using CPUs or one GPU while
increasing the overall flexibility of Accelerated OpenMP
Improved parallelization techniques for the density matrix renormalization group
A distributed-memory parallelization strategy for the density matrix
renormalization group is proposed for cases where correlation functions are
required. This new strategy has substantial improvements with respect to
previous works. A scalability analysis shows an overall serial fraction of 9.4%
and an efficiency of around 60% considering up to eight nodes. Sources of
possible parallel slowdown are pointed out and solutions to circumvent these
issues are brought forward in order to achieve a better performance.Comment: 8 pages, 4 figures; version published in Computer Physics
Communication
Response-time analysis of DAG tasks supporting heterogeneous computing
Hardware platforms are evolving towards parallel and heterogeneous architectures to overcome the increasing necessity of more performance in the real-time domain. Parallel programming models are fundamental to exploit the performance capabilities of these architectures. This paper proposes a novel response time analysis (RTA) for verifying the schedulability of DAG tasks supporting heterogeneous computing. It analyzes the impact of executing part of the DAG in the accelerator device. As a result, the response time upper bound of the system is more precise than the one provided by currently existing RTA targeting homogeneous architectures.This work is supported by the Spanish Ministry of Science and Innovation under contract TIN2015-65316-PPeer ReviewedPostprint (published version
A parallel algorithm for Hamiltonian matrix construction in electron-molecule collision calculations: MPI-SCATCI
Construction and diagonalization of the Hamiltonian matrix is the
rate-limiting step in most low-energy electron -- molecule collision
calculations. Tennyson (J Phys B, 29 (1996) 1817) implemented a novel algorithm
for Hamiltonian construction which took advantage of the structure of the
wavefunction in such calculations. This algorithm is re-engineered to make use
of modern computer architectures and the use of appropriate diagonalizers is
considered. Test calculations demonstrate that significant speed-ups can be
gained using multiple CPUs. This opens the way to calculations which consider
higher collision energies, larger molecules and / or more target states. The
methodology, which is implemented as part of the UK molecular R-matrix codes
(UKRMol and UKRMol+) can also be used for studies of bound molecular Rydberg
states, photoionisation and positron-molecule collisions.Comment: Write up of a computer program MPI-SCATCI Computer Physics
Communications, in pres
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