Integration of satellite remote sensing data in ecosystem modelling at local scales: Practices and trends

1. Spatiotemporal ecological modelling of terrestrial ecosystems relies on climatological and biophysical Earth observations. Due to their increasing availability, global coverage, frequent acquisition and high spatial resolution, satellite remote sensing (SRS) products are frequently integrated to in situ data in the development of ecosystem models (EMs) quantifying the interaction among the vegetation component and the hydrological, energy and nutrient cycles. This review highlights the main advances achieved in the last decade in combining SRS data with EMs, with particular attention to the challenges modellers face for applications at local scales (e.g. small watersheds). 2. We critically review the literature on progress made towards integration of SRS data into terrestrial EMs: (1) as input to define model drivers; (2) as reference to validate model results; and (3) as a tool to sequentially update the state variables, and to quantify and reduce model uncertainty. 3. The number of applications provided in the literature shows that EMs may profit greatly from the inclusion of spatial parameters and forcings provided by vegetation and climatic‐related SRS products. Limiting factors for the application of such models to local scales are: (1) mismatch between the resolution of SRS products and model grid; (2) unavailability of specific products in free and public online repositories; (3) temporal gaps in SRS data; and (4) quantification of model and measurement uncertainties. This review provides examples of possible solutions adopted in recent literature, with particular reference to the spatiotemporal scales of analysis and data accuracy. We propose that analysis methods such as stochastic downscaling techniques and multi‐sensor/multi‐platform fusion approaches are necessary to improve the quality of SRS data for local applications. Moreover, we suggest coupling models with data assimilation techniques to improve their forecast abilities. 4. This review encourages the use of SRS data in EMs for local applications, and underlines the necessity for a closer collaboration among EM developers and remote sensing scientists. With more upcoming satellite missions, especially the Sentinel platforms, concerted efforts to further integrate SRS into modelling are in great demand and these types of applications will certainly proliferate

Mapping intra- and inter-annual dynamics in wetlands with multispectral, thermal and SAR time series

Kartierung der intra- und interannuellen Dynamik von Feuchtgebieten mit multispektralen, thermischen und SAR-Zeitreihen Die Analyse der aktuellen räumlichen Verbreitung und der zeitlichen Entwicklung von Feuchtgebieten stellt eine äußerst komplexe Aufgabe dar, welche durch die Saisonalität, die schwierige Zugänglichkeit und die besonderen Eigenschaften als Ökoton bedingt ist. Erdbeobachtungssysteme sind somit das am besten geeignete Werkzeug, um zeitliche und räumliche Muster von Feuchtgebieten auf globaler Ebene zu beobachten (saisonale Veränderungen und Langzeit-Trends) und um den Einfluss der menschlichen Aktivitäten auf ihre physischen und biologischen Eigenschaften zu untersuchen. Zur Kartierung von raum-zeitlichen Mustern wurden Zeitreihen von Radar- (Sentinel-1), Multispektral- (Sentinel-2) und Thermal-Satellitendaten (MODIS) in fünf Untersuchungsgebieten, mit für Feuchtgebiete unterschiedlichen typischen Charakteristika, untersucht. In Kapitel 1 werden die Problematik in Bezug auf die Definition von Feuchtgebieten erläutert und allgemeine Degradations-Trends beschrieben. Die Kapitel 2 und 3 behandeln einen Algorithmus, der Veränderungen mithilfe von SAR-Zeitreihen feststellt, sowie die Vorteile des Cloud-Computings für das operationelle Monitoring saisonaler Muster und die Erkennung kurzfristig auftretender Veränderungen. In den Kapiteln 4 und 5 werden die zwei Hauptursachen für den Verlust von Feuchtgebieten betrachtet: der Staudammbau und die Ausdehnung landwirtschaftlicher Flächen. In Kapitel 4 werden dichte Zeitreihen multispektraler (Sentinel-2) und SAR-Daten (Sentinel-1) verwendet, um die Feuchtgebiete Albaniens – eines Landes in dem konträre Pläne zum Ausbau seines Wasserkraftpotentials und dem Schutz intakter Flussökosysteme zu Spannungen führen – landesweit zu kartieren. Die synergetischen Vorteile, die sich durch die Fusionierung von multispektralen und SAR-Daten für die Klassifikation ergeben, werden dabei herausgestellt. Kapitel 5 veranschaulicht, dass die Kilombero-Überschwemmungsebene in Tansania ein großes und bedeutendes Feuchtgebiet ist, das in den vergangenen Jahren infolge der weitgehend unkontrollierten Ausbreitung landwirtschaftlicher Flächen in seiner Ausdehnung und seiner Ökologie stark beeinträchtigt wurde. Um die Auswirkungen der Landnutzungsänderungen des Feuchtgebietes während der vergangenen 18 Jahre zu analysieren, wurden eine Zeitreihe (2000 bis 2017) thermaler Daten (MODIS) analysiert. Die drei für die Zeitreihenanalyse angewandten Modelle zeigen, wie landwirtschaftliche Praktiken die Landoberflächentemperatur in den landwirtschaftlich genutzten Gebieten sowie in den angrenzenden natürlichen Feuchtgebieten erhöht haben.Due to wetlands’ seasonality, their difficult access and ecotone character, determining their actual extension and trends over time is a complex task. Earth Observation systems are the most appropriate tool to monitor their spatio-temporal patterns (seasonal changes and long term trends) at global scales, and to study the effects that human activities have in their physical and biological properties. In this work I use time series of radar (Sentinel-1), multispectral (Sentinel-2) and thermal (MODIS) imagery to map the spatio-temporal patterns in 5 wetlands of different characteristics. First, I introduce in chapter 1 the problematic of wetlands’ definitions and their degradation trends. I continue with a brief introduction on remote sensing, time series analysis, and their applications on wetlands’ research and management. In chapters 2 and 3 I implement an algorithm for change detection of time series of Sentinel-1 images and demonstrate the advantages of cloud computation for operational monitoring. In chapters 4 and 5 I address two of the main causes of wetland degradation: dam building and agricultural expansion. In chapter 4 I use dense time series of Sentinel-1 and Sentinel-2 images map all the wetlands of Albania; a country struggling between developing its large hydropower potential or preserving its intact and valuable river ecosystems. I evaluate the synergic advantages of fusing multispectral and radar imagery in combination with knowledge-based rules to produce classification of higher thematic and spatial resolutions. In chapter 5 I present how the Kilombero Floodplain, in Tanzania, has been degraded during the last years due to uncontrolled farmland expansion. I use a time series of thermal imagery (MODIS) from 2000 until 2017 to analyze the effect of land use changes on the wetland. I compare three models for time series analysis and reveal how farming practices have increased the surface temperature of the farmed area, as well as in adjacent natural wetlands.Mapeo de las dinámicas inter- e intra-anuales en humedales con series temporales de imágenes multiespectrales, termales y de radar Debido a la estacionalidad de los humedales, su difícil acceso y sus características de ecotono, determinar su actual extensión y sus tendencias a lo largo del tiempo es una tarea compleja. Los sistemas de observación terrestres son la herramienta más apropiada para monitorear sus patrones espacio-temporales (estacionalidad y tendencias a largo plazo) a escalas globales, y para estudiar los efectos que las actividades humanas causan en sus propiedades físicas y biológicas. En esta tesis uso series temporales de imágenes radar (Sentinel-1), multiespectrales (Sentinel-2) y termales (MODIS) para mapear los patrones espacio-temporales de 5 humedales de diferentes características. En el capítulo 1 describo los retos que derivan de las diferentes definiciones que existen de los humedales. También presento las tendencias globales de degradación que la mayoría de los humedales continúan experimentando en los últimos años. Continúo con una breve introducción de los sistemas de teledetección remota, análisis de series temporales, y sus aplicaciones a la investigación y gestión de los humedales. En los capítulos 2 y 3 implemento un algoritmo de detección de cambios para series temporales de imágenes radar, y muestro las ventajas de usar sistemas de computación en la nube para monitorear cambios en la cobertura del suelo a corto plazo. En los capítulos 4 y 5 trato con dos de las causas más comunes de degradación de humedales: la construcción de presas y la expansión de la agricultura. En el capítulo 4 uso series temporales de imágenes multiespectrales (Sentinel-2) y radar (Sentinel-1) para mapear todos los humedales Albania; un país que se debate entre desarrollar su potencial hidroenergético o preservar sus valiosos e intactos ecosistemas de rivera. Mediante la fusión de imágenes radar y multiespectrales y el uso de reglas de decisión genero un mapa de suficiente resolución espacial y temática para que pueda ser usado por sectores interesados y gestores. En el capítulo 5 presento como las llanuras inundables de Kilombero, en Tanzania, han sido degradadas durante los últimos años debido a la expansión incontrolada de la agricultura. Usando series temporales de imágenes termales (MODIS) desde 2000 hasta 2017 y mapas de cambios de usos del suelo, determino los efectos que estos cambios han tenido en el humedal. Comparo 3 modelos diferentes de análisis de series temporales y muestro cómo la expansión de la agricultura ha incrementado la temperatura superficial terrestre, no solo de la zona cultivada, sino también de zonas adyacentes aún naturales

Evaluation of ASTER-Like Daily Land Surface Temperature by Fusing ASTER and MODIS Data during the HiWATER-MUSOEXE

Land surface temperature (LST) is an important parameter that is highly responsive to surface energy fluxes and has become valuable to many disciplines. However, it is difficult to acquire satellite LSTs with both high spatial and temporal resolutions due to tradeoffs between them. Thus, various algorithms/models have been developed to enhance the spatial or the temporal resolution of thermal infrared (TIR) data or LST, but rarely both. The Spatial and Temporal Adaptive Reflectance Fusion Model (STARFM) is the widely-used data fusion algorithm for Landsat and MODIS imagery to produce Landsat-like surface reflectance. In order to extend the STARFM application over heterogeneous areas, an enhanced STARFM (ESTARFM) approach was proposed by introducing a conversion coefficient and the spectral unmixing theory. The aim of this study is to conduct a comprehensive evaluation of the ESTARFM algorithm for generating ASTER-like daily LST by three approaches: simulated data, ground measurements and remote sensing products, respectively. The datasets of LST ground measurements, MODIS, and ASTER images were collected in an arid region of Northwest China during the first thematic HiWATER-Multi-Scale Observation Experiment on Evapotranspiration (MUSOEXE) over heterogeneous land surfaces in 2012 from May to September. Firstly, the results of the simulation test indicated that ESTARFM could accurately predict background with temperature variations, even coordinating with small ground objects and linear ground objects. Secondly, four temporal ASTER and MODIS data fusion LSTs (i.e., predicted ASTER-like LST products) were highly consistent with ASTER LST products. Here, the four correlation coefficients were greater than 0.92, root mean square error (RMSE) reached about 2 K and mean absolute error (MAE) ranged from 1.32 K to 1.73 K. Finally, the results of the ground measurement validation indicated that the overall accuracy was high (R2 = 0.92, RMSE = 0.77 K), and the ESTARFM algorithm is a highly recommended method to assemble time series images at ASTER spatial resolution and MODIS temporal resolution due to LST estimation error less than 1 K. However, the ESTARFM method is also limited in predicting LST changes that have not been recorded in MODIS and/or ASTER pixels

Evaluation of ASTER-Like Daily Land Surface Temperature by Fusing ASTER and MODIS Data during the HiWATER-MUSOEXE

Land surface temperature (LST) is an important parameter that is highly responsive to surface energy fluxes and has become valuable to many disciplines. However, it is difficult to acquire satellite LSTs with both high spatial and temporal resolutions due to tradeoffs between them. Thus, various algorithms/models have been developed to enhance the spatial or the temporal resolution of thermal infrared (TIR) data or LST, but rarely both. The Spatial and Temporal Adaptive Reflectance Fusion Model (STARFM) is the widely-used data fusion algorithm for Landsat and MODIS imagery to produce Landsat-like surface reflectance. In order to extend the STARFM application over heterogeneous areas, an enhanced STARFM (ESTARFM) approach was proposed by introducing a conversion coefficient and the spectral unmixing theory. The aim of this study is to conduct a comprehensive evaluation of the ESTARFM algorithm for generating ASTER-like daily LST by three approaches: simulated data, ground measurements and remote sensing products, respectively. The datasets of LST ground measurements, MODIS, and ASTER images were collected in an arid region of Northwest China during the first thematic HiWATER-Multi-Scale Observation Experiment on Evapotranspiration (MUSOEXE) over heterogeneous land surfaces in 2012 from May to September. Firstly, the results of the simulation test indicated that ESTARFM could accurately predict background with temperature variations, even coordinating with small ground objects and linear ground objects. Secondly, four temporal ASTER and MODIS data fusion LSTs (i.e., predicted ASTER-like LST products) were highly consistent with ASTER LST products. Here, the four correlation coefficients were greater than 0.92, root mean square error (RMSE) reached about 2 K and mean absolute error (MAE) ranged from 1.32 K to 1.73 K. Finally, the results of the ground measurement validation indicated that the overall accuracy was high (R2 = 0.92, RMSE = 0.77 K), and the ESTARFM algorithm is a highly recommended method to assemble time series images at ASTER spatial resolution and MODIS temporal resolution due to LST estimation error less than 1 K. However, the ESTARFM method is also limited in predicting LST changes that have not been recorded in MODIS and/or ASTER pixels