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A novel 3D imaging system for strawberry phenotyping
Accurate and quantitative phenotypic data in plant breeding programmes is vital in breeding to assess the performance of genotypes and to make selections. Traditional strawberry phenotyping relies on the human eye to assess most external fruit quality attributes, which is time-consuming and subjective. 3D imaging is a promising high-throughput technique that allows multiple external fruit quality attributes to be measured simultaneously. A low cost multi-view stereo (MVS) imaging system was developed, which captured data from 360ยฐ around a target strawberry fruit. A 3D point cloud of the sample was derived and analysed with custom-developed software to estimate berry height, length, width, volume, calyx size, colour and achene number. Analysis of these traits in 100 fruits showed good concordance with manual assessment methods. This study demonstrates the feasibility of an MVS based 3D imaging system for the rapid and quantitative phenotyping of seven agronomically important external strawberry traits. With further improvement, this method could be applied in strawberry breeding programmes as a cost effective phenotyping technique
Performances Evaluation of a Low-Cost Platform for High-Resolution Plant Phenotyping
This study aims to test the performances of a low-cost and automatic phenotyping platform, consisting of a Red-Green-Blue (RGB) commercial camera scanning objects on rotating plates and the reconstruction of main plant phenotypic traits via the structure for motion approach (SfM). The precision of this platform was tested in relation to three-dimensional (3D) models generated from images of potted maize, tomato and olive tree, acquired at a different frequency (steps of 4ยฐ, 8ยฐ and 12ยฐ) and quality (4.88, 6.52 and 9.77 ยตm/pixel). Plant and organs heights, angles and areas were extracted from the 3D models generated for each combination of these factors. Coefficient of determination (R2), relative Root Mean Square Error (rRMSE) and Akaike Information Criterion (AIC) were used as goodness-of-fit indexes to compare the simulated to the observed data. The results indicated that while the best performances in reproducing plant traits were obtained using 90 images at 4.88 ยตm/pixel (R2 = 0.81, rRMSE = 9.49% and AIC = 35.78), this corresponded to an unviable processing time (from 2.46 h to 28.25 h for herbaceous plants and olive trees, respectively). Conversely, 30 images at 4.88 ยตm/pixel resulted in a good compromise between a reliable reconstruction of considered traits (R2 = 0.72, rRMSE = 11.92% and AIC = 42.59) and processing time (from 0.50 h to 2.05 h for herbaceous plants and olive trees, respectively). In any case, the results pointed out that this input combination may vary based on the trait under analysis, which can be more or less demanding in terms of input images and time according to the complexity of its shape (R2 = 0.83, rRSME = 10.15% and AIC = 38.78). These findings highlight the reliability of the developed low-cost platform for plant phenotyping, further indicating the best combination of factors to speed up the acquisition and elaboration process, at the same time minimizing the bias between observed and simulated data
3์ฐจ์ ์ค์บ ๋ชจ๋ธ๊ณผ ๊ดํ ์๋ฎฌ๋ ์ด์ ์ ์ด์ฉํ ํํ๋ฆฌ์นด์ ์์ก ๋จ๊ณ ๋ฐ ์ฐจ๊ด ์กฐ๊ฑด๋ณ ์๊ด๊ณผ ๊ดํฉ์ฑ ์๋ ์์ธก
ํ์๋
ผ๋ฌธ (์์ฌ)-- ์์ธ๋ํ๊ต ๋ํ์ : ๋์
์๋ช
๊ณผํ๋ํ ์๋ฌผ์์ฐ๊ณผํ๋ถ(์์๊ณผํ์ ๊ณต), 2019. 2. ์์ ์ต.In greenhouses, many crops are cultivated at high planting densities because this type of cultivation is highly productive and presents economic advantages. A high planting density causes strong mutual shading effects among adjacent crops, decreasing canopy light interception, photosynthesis, and consequently, crop yield and quality. The objective of this study was to analyze the light interception and photosynthetic rates of the paprika canopy using 3D-scanned plant models and optical simulation according to the growth stage and shading condition. Here, 3D plant models of paprika plants grown in greenhouses were constructed at 7, 35, 63, 91, and 112 days after transplanting by using a portable 3D scanner. To investigate the shading effects, the 3D-scanned plant models were arranged as isotropic forms of 1 ร 1, 3 ร 3, 5 ร 5, 7 ร 7, and 9 ร 9 plants with a distance of 60 cm between plants, and the light interception of the center plant in the arrangement was obtained with the growth stage by simulation. The canopy photosynthetic rates were calculated using the Farquhar, von Caemmerer, and Berry (FvCB) model. The total canopy light interception and light interception per unit leaf area of the center plant decreased due to the self- and mutual shading effects caused by the growth of each plant and the increase in the number of surrounding plants. The canopy photosynthetic rates showed similar patterns to those of the total light interception, but their decreasing rate was less than that of the total light interception because the leaf photosynthetic rate was saturated at the top of the canopy. In this study, the spatial distributions of the canopy light interception and photosynthetic rates could be analyzed by using 3D-scanned models of paprika and optical simulation. This method can be an effective tool for designing crop cultivation systems as well as estimating canopy light interception and photosynthesis in greenhouses.์จ์ค์์๋ ๋์ ๋จ์ ์์ฐ์ฑ์ ์ํด ๋์ ์ฌ์ ๋ฐ๋๋ก ์๋ฌผ์ ์ฌ๋ฐฐํ๋ค. ๊ทธ๋ฌ๋ ๋์ ์ฌ์ ๋ฐ๋ ์กฐ๊ฑด์์๋ ์ธ์ ํ ๊ฐ์ฒด์ ์ํ ์ํธ ์ฐจ๊ด์ด ๋ฐ์ํ์ฌ ์บ๋
ธํผ ์๊ด๊ณผ ๊ดํฉ์ฑ์ ๊ฐ์์ํค๊ณ , ๊ฒฐ๊ณผ์ ์ผ๋ก ์๋ฌผ ์๋๊ณผ ํ์ง์ ์ ํ๋ฅผ ์ด๋ํ๋ค. ์ด์ ๋ฐ๋ผ ์ต์ ์ฌ์ ๋ฐ๋๋ฅผ ์ฐพ๊ธฐ ์ํ ์ฐ๊ตฌ๊ฐ ์งํ๋์์ผ๋, ์ด๋ฅผ ๊ฐ์ ์ ์ธ ๋จ์๋ก ํํํ์ฌ ์๋ฌผ ๊ฐ์ ์ํธ ์์ฉ์ ๋ํ ๋ถ์์ด ์ด๋ ต๋ค. ๋ฐ๋ผ์ ๋ณธ ์ฐ๊ตฌ์ ๋ชฉ์ ์ 3์ฐจ์ ์ค์บ ๋ชจ๋ธ๊ณผ ๊ดํ ์๋ฎฌ๋ ์ด์
์ ์ด์ฉํ์ฌ ํํ๋ฆฌ์นด์ ์์ก ๋จ๊ณ์ ์ฐจ๊ด ์กฐ๊ฑด์ ๋ฐ๋ฅธ ์๊ด๊ณผ ๊ดํฉ์ฑ ์๋๋ฅผ ๋ถ์ํ๋ ๊ฒ์ด๋ค. 3์ฐจ์ ์ค์บ๋์ ํตํด ์ ์ ํ 7, 35, 63, 91, 112์ผ์ ์๋ฌผ ๋ชจ๋ธ์ ๊ตฌ์ถํ์๋ค. ์๋ฌผ์ ์ฐจ๊ด ํจ๊ณผ๋ฅผ ๋ถ์ํ๊ธฐ ์ํด ์๋ฌผ ๋ชจ๋ธ์ 60cm ๊ฐ๊ฒฉ์ผ๋ก 1 ร 1, 3 ร 3, 5 ร 5, 7 ร 7, 9 ร 9๋ก ์ ๋ฐฉํ ๋ฐฐ์นํ์ฌ ์์ก ๋จ๊ณ๋ณ ์๋ฎฌ๋ ์ด์
์ ์งํํ์๊ณ , ์ค์ฌ์ ์์นํ ๊ฐ์ฒด์ ์๊ด๋์ ๊ณ์ฐํ์๋ค. ์บ๋
ธํผ ๊ดํฉ์ฑ ์๋๋ FvCB ๋ชจ๋ธ์ ์ด์ฉํ์ฌ ๊ณ์ฐํ์๋ค. ์๋ฎฌ๋ ์ด์
๊ฒฐ๊ณผ ๋ชจ๋ ์์ก ๋จ๊ณ์์ ์ฃผ๋ณ ๊ฐ์ฒด ์๊ฐ ์ฆ๊ฐํ ์๋ก ์๋ฌผ ์๊ด๋์ ๊ฐ์ํ์๋ค. ํนํ, ๋จ์ ์ฝ๋ฉด์ ๋น ์๊ด๋์ ์๋ฌผ์ ์์ก์ด ์งํ๋จ์ ๋ฐ๋ผ ๊ฐ์ํ์๋ค. ์ด๋ ๊ฐ ์๋ฌผ์ ์์ก์ ๋ฐ๋ฅธ ์๊ธฐ ๊ด ์ฐจ๋จ๊ณผ ์ฃผ๋ณ ์๋ฌผ์ ์ฆ๊ฐ์ ๋ฐ๋ฅธ ์ํธ ๊ด ์ฐจ๋จ ํจ๊ณผ ๋๋ฌธ์ผ๋ก ์๊ฐ๋๋ค. ์ด์ฐํํ์ ์๋ชจ๋์ ์ด ์๊ด๋๊ณผ ๋น์ทํ ๋ณํ ์์์ ๋ณด์์ผ๋, ์๋ฌผ ์๋จ๋ถ์์ ๊ดํฉ์ฑ ํฌํ๊ฐ ๋ํ๋ฌ๊ธฐ ๋๋ฌธ์ ์๊ด๋ ๋ณํ์ ๊ฐ์์จ์ ์์๋ค. ๋ณธ ์คํ์์๋ ํํ๋ฆฌ์นด์ 3์ฐจ์ ์ค์บ ๋ชจ๋ธ๊ณผ ๊ดํ ์๋ฎฌ๋ ์ด์
์ ์ด์ฉํ์ฌ ์์ก ๋จ๊ณ์ ์ฃผ๋ณ ๊ฐ์ฒด์ ์ฆ๊ฐ์ ๋ฐ๋ฅธ ์๋ฌผ์ ์๊ด๊ณผ ๊ดํฉ์ฑ ๋ณํ๋ฅผ ๋ถ์ํ ์ ์์๋ค. ์ด๋ ์ถํ ์จ์ค ๋ด์์ ์๋ฌผ ์ฌ๋ฐฐ ์์คํ
์ ๋์์ธํ๊ณ , ์๊ด๊ณผ ๊ดํฉ์ฑ์ ์์ธกํ๋ ๋ฐ์ ํจ๊ณผ์ ์ธ ๋ฐฉ๋ฒ์ด ๋ ์ ์์ ๊ฒ์ด๋ค.ABSTRACT i
CONTENTS iii
LIST OF TABLES iv
LIST OF FIGURES v
INTRODUCTION 1
LITERATURE REVIEW 3
MATERIALS AND METHODS 6
DISCUSSION 12
CONCLUSION 24
LITERATURE CITED 29
APPENDICES 37
ABSTRACT IN KOREAN 40Maste
์จ์ค ๋ด ๊ตฐ๋ฝ ๋ด๋ถ LED๋ณด๊ด์ ์ํ ํํ๋ฆฌ์นด์ ๊ด ์ด์ฉ ํจ์จ ๋ฐ ๋ฌผ ์ด์ฉ ํจ์จ ํ๊ฐ
ํ์๋
ผ๋ฌธ(์์ฌ) -- ์์ธ๋ํ๊ต๋ํ์ : ๋์
์๋ช
๊ณผํ๋ํ ๋๋ฆผ์๋ฌผ์์ํ๋ถ, 2021.8. ๊ถ์ฑ๋ฏผ.In greenhouses, the higher plant density, the less sunlight inside the canopy due to mutual shadings by adjacent plants. As a countermeasure, inter-lighting has been introduced to compensate for the lack of light in the middle and bottom parts of the canopy. However, most research have focused on growth and yield, not light use efficiency (LUE) and water use efficiency (WUE). The objective of this study was to evaluate the LUE and WUE of sweet peppers subjected to inter-lighting in greenhouses. Two lighting treatments, natural light (control) and supplemental inter-lighting of red and blue LEDs, were applied. The inter-lighting started at 34 days after transplanting (DAT). The ratio of red and blue light in photosynthetic photon flux density (PPFD) was 8:2, and the total PPFD was adjusted to 71 ฮผmolยทm2ยทs1 at 20 cm distance. To quantify the transpiration from the plants, the amount of daily transpiration was measured by subtracting the drainage from the supplied nutrient solution, and hydroponic system weight change. The photosynthetic rate was obtained by measuring light response curves at light intensities of 0, 50, 100, 200, 400, 600, 900, 1200, 1500, and 2000 ฮผmolยทm2ยทs1 in PPFD. The LUEs were calculated based on the light interception obtained by 3D-scanned plant models and ray-tracing simulation. The WUEs were calculated using dry weight per accumulated water consumption. The calculated results showed the increase in LUE at the canopy level, which is likely due to the improvement of canopy light distribution by inter-lighting. The WUE for biomass and fruit yield were higher in inter-lighting than those in the control. These results were due to the increases in plant dry weight and fruit yield, which is greater than the increase in water consumption by inter-lighting. In this study, the improvement of LUE and WUE by inter-lighting could be quantified by optical simulation and the water consumption during the whole growth period.์จ์ค์์๋ ์ฌ์๋ฐ๋๊ฐ ๋์์ง์๋ก ์ธ์ ํ ์๋ฌผ๊ฐ์ ๊ฐ์ญ ํ์์ผ๋ก ์บ๋
ธํผ ๋ด๋ถ์ ๋น์ด ๋ถ์กฑํ๊ฒ ๋๋ค. ์ด์ ๋ํ ๋์ฑ
์ผ๋ก ๊ตฐ๋ฝ ์ค, ํ๋จ๋ถ์ ๋น ๋ถ์กฑ์ ๋ณด์ํ๊ธฐ ์ํด ๊ตฐ๋ฝ ๋ด ๋ณด๊ด์ ๋์
ํ๊ณ ์๋ค. ํ์ฌ ๋๋ถ๋ถ์ ์ฐ๊ตฌ๋ ๊ด์ด์ฉ ํจ์จ(LUE), ๋ฌผ์ด์ฉ ํจ์จ(WUE)์ด ์๋ ์์ฅ๊ณผ ์ํ๋์ ์ด์ ์ ๋ง์ถ์ด ์๋ค. ๋ฐ๋ผ์ ์ด ์ฐ๊ตฌ์ ๋ชฉ์ ์ ์จ์ค์์ ๊ตฐ๋ฝ ๋ด ์ธก๋ฉด ๋ณด๊ด(inter-lighting) ํ์์ ์๋ ํํ๋ฆฌ์นด์ LUE์ WUE๋ฅผ ํ๊ฐํ๋ ๊ฒ์ด๋ค. ์์ฐ๊ด(๋์กฐ๊ตฌ)๊ณผ ์์ฐ๊ด์ ์ ์ ๋ฐ ์ฒญ์ LED์ ์ํ ๋ณด๊ด ์ฒ๋ฆฌ๊ตฌ๊ฐ ์ ์ฉ๋์๋ค. ๋ณด๊ด ์ฒ๋ฆฌ๋ ์ ์ ํ 34์ผ (DAT)์ ์์ํ์๊ณ , ์ ์ ๋ฐ ์ฒญ์ LED ๋น์จ์ด 8:2์ธ ๊ด์์ 20cm ๊ฑฐ๋ฆฌ์์ 71mol ยท m-2 ยท s-1๋ก ์ค์ ํ์๋ค. ์๋ฌผ์ ์ฆ์ฐ๋์ ์ ๋ํ ํ๊ธฐ ์ํด ์๊ฒฝ์ฌ๋ฐฐ ๋ฌด๊ฒ์ธก์ ์์คํ
์ผ๋ก ๊ธ์ก๋์์ ๋ฐฐ์ก๋์ ์ ํ์ฌ ํ๋ฃจ ์ฆ์ฐ๋์ ์ธก์ ํ๋ค. ๊ดํฉ์ฑ์๋๋ 0, 50, 100, 200, 400, 600, 900, 1200, 1500, 2000 ฮผmol ยท m-2 ยท s-1์์ ๊ด๋ฐ์ ๊ณก์ ์ ์ธก์ ํ์ฌ ์ป์๋ค. LUE๋ 40, 60, 80, 100 ๋ฐ 120 DAT์์ 3D ์๋ฌผ ๋ชจ๋ธ ๋ฐ ๊ดํ ์๋ฎฌ๋ ์ด์
์ผ๋ก ์ธก์ ํ ์๊ด ํ์ธ๋ฅผ ๊ธฐ๋ฐ์ผ๋ก ๊ณ์ฐํ์๋ค. WUE๋ 40, 60, 80, 100 ๋ฐ 120 DAT์์ ๋์ ๋ ๋ฌผ ์๋น๋ ๋๋น ๊ฑด์กฐ์ค์ผ๋ก ๊ณ์ฐํ์๋ค. ์๋ฎฌ๋ ์ด์
๊ฒฐ๊ณผ์์ ์บ๋
ธํผ ์์ค์ LUE๊ฐ ์ฆ๊ฐํ์๋๋ฐ, ์ด๋ ๋ณด๊ด ์ด ์บ๋
ธํผ ๋ด๋ถ์ ์๊ด ๊ฐ์ ์ ๊ธฐ์ธํ ๊ฒ์ผ๋ก ๋ณด์ธ๋ค. ๊ฑด๋ฌผ์ค ๋ฐ ๊ณผ์ผ ์์ฐ๋์ ๋ํ WUE๋ ๋์กฐ๊ตฐ๋ณด๋ค ๋ณด๊ด ์ฒ๋ฆฌ๊ตฌ์์ ๋ ๋์๋ค. ์ด๋ฌํ ๊ฒฐ๊ณผ๋ ๋ณด๊ด์ ์ํ ๋ฌผ ์๋น๋ณด๋ค ์๋ฌผ์ ๊ฑด์กฐ ์ค๋๊ณผ ๊ณผ์ผ ์ํ๋์ ์ฆ๊ฐํญ์ด ๋ ๋์๊ธฐ ๋๋ฌธ์ด๋ค. ๋ณธ ์ฐ๊ตฌ์์๋ ๊ดํ ์๋ฎฌ๋ ์ด์
๊ณผ ์ ์ฒด ์์ฅ ๊ธฐ๊ฐ ๋์์ ๋ฌผ ์ด์ฉ๋์ ๋ถ์ํ์ฌ ๊ตฐ๋ฝ ๋ด ์ธก๋ฉด ๋ณด๊ด์ผ๋ก ์ธํ LUE ๋ฐ WUE ์ฆ๊ฐ๋ฅผ ์ ๋ํ ํ ์ ์๊ฒ ๋์๋ค.INTRODUCTION 1
LITERATURE REVIEW 3
MATERIALS AND METHODS 5
RESULTS 15
DISCUSSION 25
CONCLUSION 28
LITERATURE CITED 29
ABSTRACT IN KOREAN 39์
Application of UAV based high-resolution remote sensing for crop monitoring
Advances in technologies could offer enormous potential for crop monitoring applications, allowing the real-time acquisition of various environmental data. Technology such as high spatio-temporal imagery of unmanned aerial vehicles (UAVโs) can be widely used in crop monitoring applications. These technologies are expected to revolutionize the global agriculture practices, by enabling decision-making during the crop cycle days. Such results allow the effective practice of agricultural inputs, aiding precision agriculture pillars, i.e., applying the right practice in the right place, with the right amount and time. However, the actual exploitation of UAVโs has not been much strong in smart farming, mainly due to the challenges faced during selecting and deploying relevant technologies, including data acquisition and processing methods. The major problem is that there is still no consistent workflow for the use of UAVโs in such areas, as this mechanization is relatively new. In this article, the latest applications of UAVโs for crop monitoring are reviewed. It covers the most common applications, the types of UAVโs used and then we focused on data acquisition methods and technologies, employing the benefit and drawbacks of each. It also indicates the most popular image processing methods and summarizes the potential application in agricultural operations.ย
Automatic leaf segmentation and overlapping leaf separation using stereo vision
Farm management and crop quality assessment is becoming increasingly automated to keep up with demand. The physical examination of the plant leaves, stems and fruit can provide valuable information about a plantโs health. Automating the visual inspection through machine vision spawns challenges such as occlusions, irregular lightning and varying environmental conditions. In this paper, a plant leaf extraction algorithm utilising depth from a stereo vision sensor is presented. The algorithm tackles multiple leaf segmentation and overlapping leaf separation through synergising features such as colour, shape and depth. Depth is particularly used to measure discontinuities along its gradient in the disparity maps. The algorithm has a segmentation rate of 78% for individual plant leaves, over a range of complex backgrounds and changing plant canopies. The proposed algorithm was evaluated using 272 cotton and hibiscus plant images with results demonstrating that depth properties were effective in separating occluded and overlapping leaves, with a high separation rate of 84%. Leaf occlusion could be detected automatically without adding any artificial tags on the leaf boundaries. Furthermore, the results show a nearly identical performance for both types of plants (cotton and hibiscus) under various lighting and environmental conditions. The developed algorithm could be potentially applied to other types of plants that have similar structures to cotton and hibiscus
๊ฐ๋ณ ์ด์จ ๋ฐ ์๋ฌผ ์์ก ์ผ์ฑ ๊ธฐ๋ฐ์ ์ ๋ฐ ์๊ฒฝ์ฌ๋ฐฐ ์์ก ๊ด๋ฆฌ ์์คํ
ํ์๋
ผ๋ฌธ (๋ฐ์ฌ) -- ์์ธ๋ํ๊ต ๋ํ์ : ๋์
์๋ช
๊ณผํ๋ํ ๋ฐ์ด์ค์์คํ
ยท์์ฌํ๋ถ(๋ฐ์ด์ค์์คํ
๊ณตํ), 2020. 8. ๊นํ์ง.In current closed hydroponics, the nutrient solution monitoring and replenishment are conducted based on the electrical conductivity (EC) and pH, and the fertigation is carried out with the constant time without considering the plant status. However, the EC-based management is unable to detect the dynamic changes in the individual nutrient ion concentrations so the ion imbalance occurs during the iterative replenishment, thereby leading to the frequent discard of the nutrient solution. The constant time-based fertigation inevitably induces over- or under-supply of the nutrient solution for the growing plants. The approaches are two of the main causes of decreasing water and nutrient use efficiencies in closed hydroponics. Regarding the issues, the precision nutrient solution management that variably controls the fertigation volume and corrects the deficient nutrient ions individually would allow both improved efficiencies of fertilizer and water use and increased lifespan of the nutrient solution. The objectives of this study were to establish the precision nutrient solution management system that can automatically and variably control the fertigation volume based on the plant-growth information and supply the individual nutrient fertilizers in appropriate amounts to reach the optimal compositions as nutrient solutions for growing plants. To achieve the goal, the sensing technologies for the varying requirements of water and nutrients were investigated and validated. Firstly, an on-the-go monitoring system was constructed to monitor the lettuces grown under the closed hydroponics based on the nutrient film technique for the entire bed. The region of the lettuces was segmented by the excess green (ExG) and Otsu method to obtain the canopy cover (CC). The feasibility of the image processing for assessing the canopy (CC) was validated by comparing the computed CC values with the manually analyzed CC values. From the validation, it was confirmed the image monitoring and processing for the CC measurements were feasible for the lettuces before harvest. Then, a transpiration rate model using the modified Penman-Monteith equation was fitted based on the obtained CC, radiation, air temperature, and relative humidity to estimate the water need of the growing lettuces. Regarding the individual ion concentration measurements, two-point normalization, artificial neural network, and a hybrid signal processing consisting of the two-point normalization and artificial neural network were compared to select an effective method for the ion-selective electrodes (ISEs) application in continuous and autonomous monitoring of ions in hydroponic solutions. The hybrid signal processing showed the most accuracy in sample measurements, but the vulnerability to the sensor malfunction made the two-point normalization method with the most precision would be appropriate for the long-term monitoring of the nutrient solution. In order to determine the optimal injection amounts of the fertilizer salts and water for the given target individual ion concentrations, a decision tree-based dosing algorithm was designed. The feasibility of the dosing algorithm was validated with the stepwise and varying target focusing replenishments. From the results, the ion-specific replenishments formulated the compositions of the nutrient solution successfully according to the given target values. Finally, the proposed sensing and control techniques were integrated to implement the precision nutrient solution management, and the performance was verified by a closed lettuce cultivation test. From the application test, the fertigation volume was reduced by 57.4% and the growth of the lettuces was promoted in comparison with the constant timer-based fertigation strategy. Furthermore, the system successfully maintained the nutrient balance in the recycled solution during the cultivation with the coefficients of variance of 4.9%, 1.4%, 3.2%, 5.2%, and 14.9%, which were generally less than the EC-based replenishment with the CVs of 6.9%, 4.9%, 23.7%, 8.6%, and 8.3% for the NO3, K, Ca, Mg, and P concentrations, respectively. These results implied the developed precision nutrient solution management system could provide more efficient supply and management of water and nutrients than the conventional methods, thereby allowing more improved water and nutrient use efficiencies and crop productivity.ํ์ฌ์ ์ํ์ ์๊ฒฝ์ฌ๋ฐฐ ์์คํ
์์ ์์ก์ ๋ถ์๊ณผ ๋ณด์ถฉ์ ์ ๊ธฐ์ ๋๋ (EC, electrical conductivity) ๋ฐ pH๋ฅผ ๊ธฐ๋ฐ์ผ๋ก ์ํ๋๊ณ ์์ผ๋ฉฐ, ์์ก์ ๊ณต๊ธ์ ์๋ฌผ์ ์์ก ์ํ์ ๋ํ ๊ณ ๋ ค ์์ด ํญ์ ์ผ์ ํ ์๊ฐ ๋์ ํํ๊ฐ ๋์ํ์ฌ ๊ณต๊ธ๋๋ ํํ์ด๋ค. ๊ทธ๋ฌ๋ EC ๊ธฐ๋ฐ์ ์์ก ๊ด๋ฆฌ๋ ๊ฐ๋ณ ์ด์จ ๋๋์ ๋์ ์ธ ๋ณํ๋ฅผ ๊ฐ์งํ ์ ์์ด ๋ฐ๋ณต๋๋ ๋ณด์ถฉ ์ค ๋ถ๊ท ํ์ด ๋ฐ์ํ๊ฒ ๋์ด ์์ก์ ํ๊ธฐ๋ฅผ ์ผ๊ธฐํ๋ฉฐ, ๊ณ ์ ๋ ์๊ฐ ๋์์ ์์ก ๊ณต๊ธ์ ์๋ฌผ์ ๋ํด ๊ณผ์ ๋๋ ๋ถ์ถฉ๋ถํ ๋ฌผ ๊ณต๊ธ์ผ๋ก ์ด์ด์ ธ ๋ฌผ ์ฌ์ฉ ํจ์จ์ ์ ํ๋ฅผ ์ผ์ผํจ๋ค. ์ด๋ฌํ ๋ฌธ์ ๋ค์ ๋ํด, ๊ฐ๋ณ ์ด์จ ๋๋์ ๋ํด ๋ถ์กฑํ ์ฑ๋ถ๋ง์ ์ ํ์ ์ผ๋ก ๋ณด์ถฉํ๊ณ , ์๋ฌผ์ ์์ก ์ ๋์ ๊ธฐ๋ฐํ์ฌ ํ์ํ ์์ค์ ๋ง๊ฒ ์์ก์ ๊ณต๊ธํ๋ ์ ๋ฐ ๋์
์ ๊ธฐ๋ฐํ ์์ก ๊ด๋ฆฌ๋ฅผ ์ํํ๋ฉด ๋ฌผ๊ณผ ๋น๋ฃ ์ฌ์ฉ ํจ์จ์ ํฅ์๊ณผ ์์ก์ ์ฌ์ฌ์ฉ ๊ธฐ๊ฐ ์ฆ์ง์ ๊ธฐ๋ํ ์ ์๋ค. ๋ณธ ์ฐ๊ตฌ์ ๋ชฉ์ ์ ์๋์ผ๋ก, ๊ทธ๋ฆฌ๊ณ ๊ฐ๋ณ์ ์ผ๋ก ์๋ฌผ ์์ก ์ ๋ณด์ ๊ธฐ๋ฐํ์ฌ ์์ก ๊ณต๊ธ๋์ ์ ์ดํ๊ณ , ์๋ฌผ ์์ฅ์ ์ ํฉํ ์กฐ์ฑ์ ๋ง๊ฒ ํ์ฌ ์์ก์ ์ด์จ ๋๋ ์ผ์ฑ์ ๊ธฐ๋ฐํ์ฌ ์ ์ ํ ์์ค๋งํผ์ ๋ฌผ๊ณผ ๊ฐ๋ณ ์๋ถ ๋น๋ฃ๋ฅผ ๋ณด์ถฉํ ์ ์๋ ์ ๋ฐ ์๊ฒฝ์ฌ๋ฐฐ ์์ก ๊ด๋ฆฌ ์์คํ
์ ๊ฐ๋ฐํ๋ ๊ฒ์ด๋ค. ํด๋น ๋ชฉํ๋ฅผ ๋ฌ์ฑํ๊ธฐ ์ํด, ๋ณ์ดํ๋ ๋ฌผ๊ณผ ์๋ถ ์๊ตฌ๋์ ์ธก์ ํ ์ ์๋ ๋ชจ๋ํฐ๋ง ๊ธฐ์ ๋ค์ ๋ถ์ํ๊ณ ๊ฐ ๋ชจ๋ํฐ๋ง ๊ธฐ์ ๋ค์ ๋ํ ๊ฒ์ฆ์ ์ํํ์๋ค. ๋จผ์ , ์๋ฌผ์ ๋ฌผ ์๊ตฌ๋์ ์ค์๊ฐ์ผ๋ก ๊ด์ธกํ ์ ์๋ ์์ ๊ธฐ๋ฐ ์ธก์ ๊ธฐ์ ์ ์กฐ์ฌํ์๋ค. ์์ ๊ธฐ๋ฐ ๋ถ์ ํ์ฉ์ ์ํด ๋ฐ๋ง๊ฒฝ ๊ธฐ๋ฐ์ ์ํ์ ์๊ฒฝ์ฌ๋ฐฐ ํ๊ฒฝ์์ ์๋ผ๋ ์์ถ์ ์ด๋ฏธ์ง๋ค์ ์ ์ฒด ๋ฒ ๋์ ๋ํด ์์งํ ์ ์๋ ์์ ๋ชจ๋ํฐ๋ง ์์คํ
์ ๊ตฌ์ฑํ์๊ณ , ์์งํ ์์ ์ค ์์ถ ๋ถ๋ถ๋ง์ excess green (ExG)๊ณผ Otsu ๋ฐฉ๋ฒ์ ํตํด ๋ถ๋ฆฌํ์ฌ ํฌ์์๋ฌผ๋ฉด์ (CC, canopy cover)์ ํ๋ํ์๋ค. ์์ ์ฒ๋ฆฌ ๊ธฐ์ ์ ์ ์ฉ์ฑ ํ๊ฐ๋ฅผ ์ํด ์ง์ ๋ถ์ํ ํฌ์์๋ฌผ๋ฉด์ ๊ฐ๊ณผ ์ด๋ฅผ ๋น๊ตํ์๋ค. ๋น๊ต ๊ฒ์ฆ ๊ฒฐ๊ณผ์์ ํฌ์์๋ฌผ๋ฉด์ ์ธก์ ์ ์ํ ์์ ์์ง ๋ฐ ๋ถ์์ด ์ํ ์ ๊น์ง์ ์์ถ์ ๋ํด ์ ์ฉ ๊ฐ๋ฅํจ์ ํ์ธํ์๋ค. ์ดํ ์์งํ ํฌ์์๋ฌผ๋ฉด์ ๊ณผ ๊ธฐ์จ, ์๋์ต๋, ์ผ์ฌ๋์ ๊ธฐ๋ฐ์ผ๋ก ์์ก ์ค์ธ ์์ถ๋ค์ด ์๊ตฌํ๋ ๋ฌผ์ ์์ ์์ธกํ๊ธฐ ์ํด Penman-Monteith ๋ฐฉ์ ์ ๊ธฐ๋ฐ์ ์ฆ์ฐ๋ ์์ธก ๋ชจ๋ธ์ ๊ตฌ์ฑํ์์ผ๋ฉฐ ์ค์ ์ฆ์ฐ๋๊ณผ ๋น๊ตํ์์ ๋ ๋์ ์ผ์น๋๋ฅผ ํ์ธํ์๋ค. ๊ฐ๋ณ ์ด์จ ๋๋ ์ธก์ ๊ณผ ๊ด๋ จํ์ฌ์๋, ์ด์จ์ ํ์ฑ์ ๊ทน (ISE, ion-selective electrode)๋ฅผ ์ด์ฉํ ์๊ฒฝ์ฌ๋ฐฐ ์์ก ๋ด ์ด์จ์ ์ฐ์์ ์ด๊ณ ์์จ์ ์ธ ๋ชจ๋ํฐ๋ง ์ํ์ ์ํด 2์ ์ ๊ทํ, ์ธ๊ณต์ ๊ฒฝ๋ง, ๊ทธ๋ฆฌ๊ณ ์ด ๋์ ๋ณตํฉ์ ์ผ๋ก ๊ตฌ์ฑํ ํ์ด๋ธ๋ฆฌ๋ ์ ํธ ์ฒ๋ฆฌ ๊ธฐ๋ฒ์ ์ฑ๋ฅ์ ๋น๊ตํ์ฌ ๋ถ์ํ์๋ค. ๋ถ์ ๊ฒฐ๊ณผ, ํ์ด๋ธ๋ฆฌ๋ ์ ํธ ์ฒ๋ฆฌ ๋ฐฉ์์ด ๊ฐ์ฅ ๋์ ์ ํ์ฑ์ ๋ณด์์ผ๋, ์ผ์ ๊ณ ์ฅ์ ์ทจ์ฝํ ์ ๊ฒฝ๋ง ๊ตฌ์กฐ๋ก ์ธํด ์ฅ๊ธฐ๊ฐ ๋ชจ๋ํฐ๋ง ์์ ์ฑ์ ์์ด์๋ ๊ฐ์ฅ ๋์ ์ ๋ฐ๋๋ฅผ ๊ฐ์ง 2์ ์ ๊ทํ ๋ฐฉ์์ ์ผ์ ์ด๋ ์ด์ ์ ์ฉํ๋ ๊ฒ์ด ์ ํฉํ ๊ฒ์ผ๋ก ํ๋จํ์๋ค. ๋ํ, ์ฃผ์ด์ง ๊ฐ๋ณ ์ด์จ ๋๋ ๋ชฉํ๊ฐ์ ๋ง๋ ๋น๋ฃ ์ผ ๋ฐ ๋ฌผ์ ์ต์ ์ฃผ์
๋์ ๊ฒฐ์ ํ๊ธฐ ์ํด ์์ฌ๊ฒฐ์ ํธ๋ฆฌ ๊ตฌ์กฐ์ ๋น๋ฃ ํฌ์
์๊ณ ๋ฆฌ์ฆ์ ์ ์ํ์๋ค. ์ ์ํ ๋น๋ฃ ํฌ์
์๊ณ ๋ฆฌ์ฆ์ ํจ๊ณผ์ ๋ํด์๋ ์์ฐจ์ ์ธ ๋ชฉํ์ ๋ํ ๋ณด์ถฉ ๋ฐ ํน์ ์ฑ๋ถ์ ๋ํด ์ง์ค์ ์ธ ๋ณํ๋ฅผ ๋ถ์ฌํ ๋ณด์ถฉ ์ํ ์คํ์ ํตํด ๊ฒ์ฆํ์์ผ๋ฉฐ, ๊ทธ ๊ฒฐ๊ณผ ์ ์ํ ์๊ณ ๋ฆฌ์ฆ์ ์ฃผ์ด์ง ๋ชฉํ๊ฐ๋ค์ ๋ฐ๋ผ ์ฑ๊ณต์ ์ผ๋ก ์์ก์ ์กฐ์ฑํ์์์ ํ์ธํ์๋ค. ๋ง์ง๋ง์ผ๋ก, ์ ์๋์๋ ์ผ์ฑ ๋ฐ ์ ์ด ๊ธฐ์ ๋ค์ ํตํฉํ์ฌ NFT ๊ธฐ๋ฐ์ ์ํ์ ์๊ฒฝ์ฌ๋ฐฐ ๋ฐฐ๋์ ์์ถ ์ฌ๋ฐฐ๋ฅผ ์ํํ์ฌ ์ค์ฆํ์๋ค. ์ค์ฆ ์คํ์์, ์ข
๋์ ๊ณ ์ ์๊ฐ ์์ก ๊ณต๊ธ ๋๋น 57.4%์ ์์ก ๊ณต๊ธ๋ ๊ฐ์์ ์์ถ ์์ก์ ์ด์ง์ ํ์ธํ์๋ค. ๋์์, ๊ฐ๋ฐ ์์คํ
์ NO3, K, Ca, Mg, ๊ทธ๋ฆฌ๊ณ P์ ๋ํด ๊ฐ๊ฐ 4.9%, 1.4%, 3.2%, 5.2%, ๊ทธ๋ฆฌ๊ณ 14.9% ์์ค์ ๋ณ๋๊ณ์ ์์ค์ ๋ณด์ฌ EC๊ธฐ๋ฐ ๋ณด์ถฉ ๋ฐฉ์์์ ๋ํ๋ ๋ณ๋๊ณ์ 6.9%, 4.9%, 23.7%, 8.6%, ๊ทธ๋ฆฌ๊ณ 8.3%๋ณด๋ค ๋์ฒด์ ์ผ๋ก ์ฐ์ํ ์ด์จ ๊ท ํ ์ ์ง ์ฑ๋ฅ์ ๋ณด์๋ค. ์ด๋ฌํ ๊ฒฐ๊ณผ๋ค์ ํตํด ๊ฐ๋ฐ ์ ๋ฐ ๊ด๋น ์์คํ
์ด ๊ธฐ์กด๋ณด๋ค ํจ์จ์ ์ธ ์์ก์ ๊ณต๊ธ๊ณผ ๊ด๋ฆฌ๋ฅผ ํตํด ์์ก ์ด์ฉ ํจ์จ์ฑ๊ณผ ์์ฐ์ฑ์ ์ฆ์ง์ ๊ธฐ์ฌํ ์ ์์ ๊ฒ์ผ๋ก ํ๋จ๋์๋ค.CHAPTER 1. INTRODUCTION 1
BACKGROUND 1
Nutrient Imbalance 2
Fertigation Scheduling 3
OBJECTIVES 7
ORGANIZATION OF THE DISSERTATION 8
CHAPTER 2. LITERATURE REVIEW 10
VARIABILITY OF NUTRIENT SOLUTIONS IN HYDROPONICS 10
LIMITATIONS OF CURRENT NUTRIENT SOLUTION MANAGEMENT IN CLOSED HYDROPONIC SYSTEM 11
ION-SPECIFIC NUTRIENT MONITORING AND MANAGEMENT IN CLOSED HYDROPONICS 13
REMOTE SENSING TECHNIQUES FOR PLANT MONITORING 17
FERTIGATION CONTROL METHODS BASED ON REMOTE SENSING 19
CHAPTER 3. ON-THE-GO CROP MONITORING SYSTEM FOR ESTIMATION OF THE CROP WATER NEED 21
ABSTRACT 21
INTRODUCTION 21
MATERIALS AND METHODS 23
Hydroponic Growth Chamber 23
Construction of an On-the-go Crop Monitoring System 25
Image Processing for Canopy Cover Estimation 29
Evaluation of the CC Calculation Performance 32
Estimation Model for Transpiration Rate 32
Determination of the Parameters of the Transpiration Rate Model 33
RESULTS AND DISCUSSION 35
Performance of the CC Measurement by the Image Monitoring System 35
Plant Growth Monitoring in Closed Hydroponics 39
Evaluation of the Crop Water Need Estimation 42
CONCLUSIONS 46
CHAPTER 4. HYBRID SIGNAL-PROCESSING METHOD BASED ON NEURAL NETWORK FOR PREDICTION OF NO3, K, CA, AND MG IONS IN HYDROPONIC SOLUTIONS USING AN ARRAY OF ION-SELECTIVE ELECTRODES 48
ABSTRACT 48
INTRODUCTION 49
MATERIALS AND METHODS 52
Preparation of the Sensor Array 52
Construction and Evaluation of Data-Processing Methods 53
Preparation of Samples 57
Procedure of Sample Measurements 59
RESULTS AND DISCUSSION 63
Determination of the Artificial Neural Network (ANN) Structure 63
Evaluation of the Processing Methods in Training Samples 64
Application of the Processing Methods in Real Hydroponic Samples 67
CONCLUSIONS 72
CHAPTER 5. DECISION TREE-BASED ION-SPECIFIC NUTRIENT MANAGEMENT ALGORITHM FOR CLOSED HYDROPONICS 74
ABSTRACT 74
INTRODUCTION 75
MATERIALS AND METHODS 77
Decision Tree-based Dosing Algorithm 77
Development of an Ion-Specific Nutrient Management System 82
Implementation of Ion-Specific Nutrient Management with Closed-Loop Control 87
System Validation Tests 89
RESULTS AND DISCUSSION 91
Five-stepwise Replenishment Test 91
Replenishment Test Focused on The Ca 97
CONCLUSIONS 99
CHAPTER 6. ION-SPECIFIC AND CROP GROWTH SENSING BASED NUTRIENT SOLUTION MANAGEMENT SYSTEM FOR CLOSED HYDROPONICS 101
ABSTRACT 101
INTRODUCTION 102
MATERIALS AND METHODS 103
System Integration 103
Implementation of the Precision Nutrient Solution Management System 106
Application of the Precision Nutrient Solution Management System to Closed Lettuce Soilless Cultivation 112
RESULTS AND DISCUSSION 113
Evaluation of the Plant Growth-based Fertigation in the Closed Lettuce Cultivation 113
Evaluation of the Ion-Specific Management in the Closed Lettuce Cultivation 118
CONCLUSIONS 128
CHAPTER 7. CONCLUSIONS 130
CONCLUSIONS OF THE STUDY 130
SUGGESTIONS FOR FUTURE STUDY 134
LIST OF REFERENCES 136
APPENDIX 146
A1. Python Code for Controlling the Image Monitoring and CC Calculation 146
A2. Ion Concentrations of the Solutions used in Chapter 4 (Unit: mgโLโ1) 149
A3. Block Diagrams of the LabVIEW Program used in Chapter 4 150
A4. Ion Concentrations of the Solutions used in Chapters 5 and 6 (Unit: mgโLโ1) 154
A5. Block Diagrams of the LabVIEW Program used in the Chapters 5 and 6 155
ABSTRACT IN KOREAN 160Docto
Inferring plantโplant interactions using remote sensing
Rapid technological advancements and increasing data availability have improved the capacity to monitor and evaluate Earth's ecology via remote sensing. However, remote sensing is notoriously โblindโ to fine-scale ecological processes such as interactions among plants, which encompass a central topic in ecology. Here, we discuss how remote sensing technologies can help infer plantโplant interactions and their roles in shaping plant-based systems at individual, community and landscape levels. At each of these levels, we outline the key attributes of ecosystems that emerge as a product of plantโplant interactions and could possibly be detected by remote sensing data. We review the theoretical bases, approaches and prospects of how inference of plantโplant interactions can be assessed remotely. At the individual level, we illustrate how close-range remote sensing tools can help to infer plantโplant interactions, especially in experimental settings. At the community level, we use forests to illustrate how remotely sensed community structure can be used to infer dominant interactions as a fundamental force in shaping plant communities. At the landscape level, we highlight how remotely sensed attributes of vegetation states and spatial vegetation patterns can be used to assess the role of local plantโplant interactions in shaping landscape ecological systems. Synthesis. Remote sensing extends the domain of plant ecology to broader and finer spatial scales, assisting to scale ecological patterns and search for generic rules. Robust remote sensing approaches are likely to extend our understanding of how plantโplant interactions shape ecological processes across scalesโfrom individuals to landscapes. Combining these approaches with theories, models, experiments, data-driven approaches and data analysis algorithms will firmly embed remote sensing techniques into ecological context and open new pathways to better understand biotic interactions
Estimating rice yield related traits and quantitative trait loci analysis under different nitrogen treatments using a simple tower-based field phenotyping system with modified single-lens reflex cameras
CIAT- Outstanding Research Publication Award (ORPA) - 2017Application of field based high-throughput phenotyping (FB-HTP) methods for monitoring plant performance in real field conditions has a high potential to accelerate the breeding process. In this paper, we discuss the use of a simple tower based remote sensing platform using modified single-lens reflex cameras for phenotyping yield traits in rice under different nitrogen (N) treatments over three years. This tower based phenotyping platform has the advantages of simplicity, ease and stability in terms of introduction, maintenance and continual operation under field conditions. Out of six phenological stages of rice analyzed, the flowering stage was the most useful in the estimation of yield performance under field conditions. We found a high correlation between several vegetation indices (simple ratio (SR), normalized difference vegetation index (NDVI), transformed vegetation index (TVI), corrected transformed vegetation index (CTVI), soil-adjusted vegetation index (SAVI) and modified soil-adjusted vegetation index (MSAVI)) and multiple yield traits (panicle number, grain weight and shoot biomass) across a three trials. Among all of the indices studied, SR exhibited the best performance in regards to the estimation of grain weight (R2 = 0.80). Under our tower-based field phenotyping system (TBFPS), we identified quantitative trait loci (QTL) for yield related traits using a mapping population of chromosome segment substitution lines (CSSLs) and a single nucleotide polymorphism data set. Our findings suggest the TBFPS can be useful for the estimation of yield performance during early crop development. This can be a major opportunity for rice breeders whom desire high throughput phenotypic selection for yield performance traits
Sensorbasierte 3D-Modellierung zur morphologischen Phรคnotypisierung am Beispiel von Mais
Phรคnotypisierung ist eine Schlรผsseltechnologie fรผr das Feldversuchswesen in der Pflanzenzucht. Mit den gewonnenen Informationen รผber den Phรคnotyp der Pflanzen lassen sich neue Strategien fรผr die Zรผchtung ableiten, um so die Qualitรคt der Pflanzen und den Ertrag zu optimieren. Wichtige Bestandteile des Phรคnotyps sind hierbei die morphologischen Eigenschaften der Pflanze. Bislang werden die Analysen des morphologischen Phรคnotyps im Feldversuchswesen weitgehend mit manuellen Methoden durchgefรผhrt, in denen Experten die Pflanzen stichprobenartig bewerten. Im Rahmen dieser Arbeit wurden zwei Methoden zur automatischen, morphologischen Phรคnotypisierung von Maispflanzen entwickelt, die eine objektive Beurteilung von Einzelpflanzen ermรถglichen. Die Datenbasis fรผr diese Methoden lieferten Time-of-Flight-Kameras, die zunรคchst auf ihre Tauglichkeit fรผr die Phรคnotypisierung unter Feldbedingungen untersucht wurden. In der ersten Methode wurde ein Top-View-Ansatz verfolgt. Mit diesem wurde das Tiefenbild der Einzelpflanze mit Hilfe von Skelettierungsalgorithmen analysiert. Als Ergebnis konnten mit dieser Methode die Pflanzenhรถhe und die Blattanzahl der Pflanze bestimmt werden. Im zweiten Ansatz wurden mindestens vier Kameras im Abstand von 90ยฐ um die Pflanze positioniert und mit Hilfe eines Multi-View-Konzeptes die entstandenen Punktwolken der Pflanze in ein dreidimensionales Pflanzenmodell รผberfรผhrt. Hierfรผr wurden 3D-Rekonstruktionsalgorithmen angewandt und die entstandene 3D-Punktwolke vernetzt. Im Anschluss wurde das Pflanzenmodell mit den in dieser Arbeit entwickelten Algorithmen geometrisch analysiert. Neben Pflanzenhรถhe und Blattanzahl konnten mit dieser Methode auch Blattlรคnge und Blattflรคche ermittelt werden. Im Vergleich zu den manuellen Methoden zur Phรคnotypisierung von Pflanzen bieten die im Rahmen dieser Arbeit entwickelten Methoden die Mรถglichkeit einer dynamischen, morphologischen Untersuchung von Maispflanzen unter Labor- und Gewรคchshausbedingungen im BBCH Makrostadium 1 mit einer gemeinsamen Datenbasis