Epidemic failure detection and consensus for extreme parallelism

Future extreme-scale high-performance computing systems will be required to work under frequent component failures. The MPI Forum’s User Level Failure Mitigation proposal has introduced an operation, MPI Comm shrink, to synchronize the alive processes on the list of failed processes, so that applications can continue to execute even in the presence of failures by adopting algorithm-based fault tolerance techniques. This MPI Comm shrink operation requires a failure detection and consensus algorithm. This paper presents three novel failure detection and consensus algorithms using Gossiping. Stochastic pinging is used to quickly detect failures during the execution of the algorithm, failures are then disseminated to all the fault-free processes in the system and consensus on the failures is detected using the three consensus techniques. The proposed algorithms were implemented and tested using the Extreme-scale Simulator. The results show that the stochastic pinging detects all the failures in the system. In all the algorithms, the number of Gossip cycles to achieve global consensus scales logarithmically with system size. The second algorithm also shows better scalability in terms of memory and network bandwidth usage and a perfect synchronization in achieving global consensus. The third approach is a three-phase distributed failure detection and consensus algorithm and provides consistency guarantees even in very large and extreme-scale systems while at the same time being memory and bandwidth efficient

An adaptive restart mechanism for continuous epidemic systems

Software services based on large-scale distributed systems demand continuous and decentralised solutions for achieving system consistency and providing operational monitoring. Epidemic data aggregation algorithms provide decentralised, scalable and fault-tolerant solutions that can be used for system-wide tasks such as global state determination, monitoring and consensus. Existing continuous epidemic algorithms either periodically restart at fixed epochs or apply changes in the system state instantly producing less accurate approximation. This work introduces an innovative mechanism without fixed epochs that monitors the system state and restarts upon the detection of the system convergence or divergence. The mechanism makes correct aggregation with an approximation error as small as desired. The proposed solution is validated and analysed by means of simulations under static and dynamic network conditions

Asynchronous epidemic algorithms for consistency in large-scale systems

Achieving and detecting a globally consistent state is essential to many services in the large and extreme-scale distributed systems, especially when the desired consistent state is critical for services operation. Centralised and deterministic approaches for synchronisation and distributed consistency are not scalable and not fault-tolerant. Alternatively, epidemic-based paradigms are decentralised computations based on randomised communications. They are scalable, resilient, fault-tolerant, and converge to the desired target in logarithmic time with respect to system size. Thus, many distributed services have adopted epidemic protocols to achieve the consensus and the consistent state, mainly due to scalability concerns. The convergence of epidemic protocols is stochastically guaranteed. However, the detection of the convergence is probabilistic and non-explicit. In a real-world environment, systems are unreliable, and epidemic protocols cannot converge to the desired state. Thus, achieving convergence by itself does not ensure making a system-wide consistent state under dynamic conditions. The research work presented in this thesis introduces the Phase Transition Algorithm (PTA) to achieve distributed consistent state based on the explicit detection of convergence. Each phase in PTA is a decentralised decision-making process that implements epidemic data aggregation, in which the detection of convergence implies achieving a global agreement. The phases in PTA can be cascaded to achieve higher certainty as desired. Following the PTA, two epidemic protocols, namely PTP and ECP, are proposed to acquire of consensus, i.e. for the consistency in data dissemination and data aggregation. The protocols are examined through simulations, and experimental results have validated the protocols ability to achieve and explicitly detect the consensus among system nodes. The research work has also studied the epidemic data aggregation under nodes churn and network failures, in which the analysis has identified three phases of the aggregation process. The investigations have shown a different impact of nodes churn on each phase. The phase that is critical for the aggregation process has been studied further, which led to propose new robust data aggregation protocols, REAP and REAP+. Each protocol has a different decentralised replication method, and both implements distributed failure detection and instantaneous mass restoration mechanisms. Simulations have validated the protocols, and results have shown protocols ability to converge, detect convergence, and produce competitive accuracy under various levels of nodes churn. Furthermore, distributed consistency in continuous systems is addressed in the research. The work has proposed a novel continuous epidemic protocol with the adaptive restart mechanism. The protocol restarts either upon the detection of system convergence or upon the detection of divergence. Also, the protocol introduces the seed selection method for the peak data distribution in decentralised approaches, which was a challenge that requires single-point initialisation and leader-election step. The simulations validated the performance of the algorithm under static and dynamic conditions and approved that convergence and divergence detection accuracy can be tuned as desired. Finally, the research work shows that combining and integrating of the proposed protocols enables extreme-scale distributed systems to achieve and detect global consistent states even under realistic and dynamical conditions

Fault tolerant decentralised K-Means clustering for asynchronous large-scale networks

The K-Means algorithm for cluster analysis is one of the most influential and popular data mining methods. Its straightforward parallel formulation is well suited for distributed memory systems with reliable interconnection networks, such as massively parallel processors and clusters of workstations. However, in large-scale geographically distributed systems the straightforward parallel algorithm can be rendered useless by a single communication failure or high latency in communication paths. The lack of scalable and fault tolerant global communication and synchronisation methods in large-scale systems has hindered the adoption of the K-Means algorithm for applications in large networked systems such as wireless sensor networks, peer-to-peer systems and mobile ad hoc networks. This work proposes a fully distributed K-Means algorithm (EpidemicK-Means) which does not require global communication and is intrinsically fault tolerant. The proposed distributed K-Means algorithm provides a clustering solution which can approximate the solution of an ideal centralised algorithm over the aggregated data as closely as desired. A comparative performance analysis is carried out against the state of the art sampling methods and shows that the proposed method overcomes the limitations of the sampling-based approaches for skewed clusters distributions. The experimental analysis confirms that the proposed algorithm is very accurate and fault tolerant under unreliable network conditions (message loss and node failures) and is suitable for asynchronous networks of very large and extreme scale

Spectra: Robust Estimation of Distribution Functions in Networks

Distributed aggregation allows the derivation of a given global aggregate property from many individual local values in nodes of an interconnected network system. Simple aggregates such as minima/maxima, counts, sums and averages have been thoroughly studied in the past and are important tools for distributed algorithms and network coordination. Nonetheless, this kind of aggregates may not be comprehensive enough to characterize biased data distributions or when in presence of outliers, making the case for richer estimates of the values on the network. This work presents Spectra, a distributed algorithm for the estimation of distribution functions over large scale networks. The estimate is available at all nodes and the technique depicts important properties, namely: robust when exposed to high levels of message loss, fast convergence speed and fine precision in the estimate. It can also dynamically cope with changes of the sampled local property, not requiring algorithm restarts, and is highly resilient to node churn. The proposed approach is experimentally evaluated and contrasted to a competing state of the art distribution aggregation technique.Comment: Full version of the paper published at 12th IFIP International Conference on Distributed Applications and Interoperable Systems (DAIS), Stockholm (Sweden), June 201

Handling Network Partitions and Mergers in Structured Overlay Networks

Structured overlay networks form a major class of peer-to-peer systems, which are touted for their abilities to scale, tolerate failures, and self-manage. Any long-lived Internet-scale distributed system is destined to face network partitions. Although the problem of network partitions and mergers is highly related to fault-tolerance and self-management in large-scale systems, it has hardly been studied in the context of structured peer-to-peer systems. These systems have mainly been studied under churn (frequent joins/failures), which as a side effect solves the problem of network partitions, as it is similar to massive node failures. Yet, the crucial aspect of network mergers has been ignored. In fact, it has been claimed that ring-based structured overlay networks, which constitute the majority of the structured overlays, are intrinsically ill-suited for merging rings. In this paper, we present an algorithm for merging multiple similar ring-based overlays when the underlying network merges. We examine the solution in dynamic conditions, showing how our solution is resilient to churn during the merger, something widely believed to be difficult or impossible. We evaluate the algorithm for various scenarios and show that even when falsely detecting a merger, the algorithm quickly terminates and does not clutter the network with many messages. The algorithm is flexible as the tradeoff between message complexity and time complexity can be adjusted by a parameter

Resilient gossip-inspired all-reduce algorithms for high-performance computing - Potential, limitations, and open questions

We investigate the usefulness of gossip-based reduction algorithms in a high-performance computing (HPC) context. We compare them to state-of-the-art deterministic parallel reduction algorithms in terms of fault tolerance and resilience against silent data corruption (SDC) as well as in terms of performance and scalability. New gossip-based reduction algorithms are proposed, which significantly improve the state-of-the-art in terms of resilience against SDC. Moreover, a new gossip-inspired reduction algorithm is proposed, which promises a much more competitive runtime performance in an HPC context than classical gossip-based algorithms, in particular for low accuracy requirements.This work has been partially funded by the Spanish Ministry of Science and Innovation [contract TIN2015-65316]; by the Government of Catalonia [contracts 2014-SGR-1051, 2014-SGR-1272]; by the RoMoL ERC Advanced Grant [grant number GA 321253] and by the Vienna Science and Technology Fund (WWTF) through project ICT15-113.Peer ReviewedPostprint (author's final draft

A survey of distributed data aggregation algorithms

Distributed data aggregation is an important task, allowing the decentralized determination of meaningful global properties, which can then be used to direct the execution of other applications. The resulting values are derived by the distributed computation of functions like COUNT, SUM, and AVERAGE. Some application examples deal with the determination of the network size, total storage capacity, average load, majorities and many others. In the last decade, many different approaches have been proposed, with different trade-offs in terms of accuracy, reliability, message and time complexity. Due to the considerable amount and variety of aggregation algorithms, it can be difficult and time consuming to determine which techniques will be more appropriate to use in specific settings, justifying the existence of a survey to aid in this task. This work reviews the state of the art on distributed data aggregation algorithms, providing three main contributions. First, it formally defines the concept of aggregation, characterizing the different types of aggregation functions. Second, it succinctly describes the main aggregation techniques, organizing them in a taxonomy. Finally, it provides some guidelines toward the selection and use of the most relevant techniques, summarizing their principal characteristics.info:eu-repo/semantics/publishedVersio