49,883 research outputs found
GPU-based Iterative Cone Beam CT Reconstruction Using Tight Frame Regularization
X-ray imaging dose from serial cone-beam CT (CBCT) scans raises a clinical
concern in most image guided radiation therapy procedures. It is the goal of
this paper to develop a fast GPU-based algorithm to reconstruct high quality
CBCT images from undersampled and noisy projection data so as to lower the
imaging dose. For this purpose, we have developed an iterative tight frame (TF)
based CBCT reconstruction algorithm. A condition that a real CBCT image has a
sparse representation under a TF basis is imposed in the iteration process as
regularization to the solution. To speed up the computation, a multi-grid
method is employed. Our GPU implementation has achieved high computational
efficiency and a CBCT image of resolution 512\times512\times70 can be
reconstructed in ~5 min. We have tested our algorithm on a digital NCAT phantom
and a physical Catphan phantom. It is found that our TF-based algorithm is able
to reconstrct CBCT in the context of undersampling and low mAs levels. We have
also quantitatively analyzed the reconstructed CBCT image quality in terms of
modulation-transfer-function and contrast-to-noise ratio under various scanning
conditions. The results confirm the high CBCT image quality obtained from our
TF algorithm. Moreover, our algorithm has also been validated in a real
clinical context using a head-and-neck patient case. Comparisons of the
developed TF algorithm and the current state-of-the-art TV algorithm have also
been made in various cases studied in terms of reconstructed image quality and
computation efficiency.Comment: 24 pages, 8 figures, accepted by Phys. Med. Bio
Grid simulation services for the medical community
The first part of this paper presents a selection of medical simulation applications, including image reconstruction, near real-time registration for neuro-surgery, enhanced dose distribution calculation for radio-therapy, inhaled drug delivery prediction, plastic surgery planning and cardio-vascular system simulation. The latter two topics are discussed in some detail. In the second part, we show how such services can be made available to the clinical practitioner using Grid technology. We discuss the developments and experience made during the EU project GEMSS, which provides reliable, efficient, secure and lawful medical Grid services
JIGSAW-GEO (1.0): locally orthogonal staggered unstructured grid generation for general circulation modelling on the sphere
An algorithm for the generation of non-uniform, locally-orthogonal staggered
unstructured spheroidal grids is described. This technique is designed to
generate very high-quality staggered Voronoi/Delaunay meshes appropriate for
general circulation modelling on the sphere, including applications to
atmospheric simulation, ocean-modelling and numerical weather prediction. Using
a recently developed Frontal-Delaunay refinement technique, a method for the
construction of high-quality unstructured spheroidal Delaunay triangulations is
introduced. A locally-orthogonal polygonal grid, derived from the associated
Voronoi diagram, is computed as the staggered dual. It is shown that use of the
Frontal-Delaunay refinement technique allows for the generation of very
high-quality unstructured triangulations, satisfying a-priori bounds on element
size and shape. Grid-quality is further improved through the application of
hill-climbing type optimisation techniques. Overall, the algorithm is shown to
produce grids with very high element quality and smooth grading
characteristics, while imposing relatively low computational expense. A
selection of uniform and non-uniform spheroidal grids appropriate for
high-resolution, multi-scale general circulation modelling are presented. These
grids are shown to satisfy the geometric constraints associated with
contemporary unstructured C-grid type finite-volume models, including the Model
for Prediction Across Scales (MPAS-O). The use of user-defined mesh-spacing
functions to generate smoothly graded, non-uniform grids for multi-resolution
type studies is discussed in detail.Comment: Final revisions, as per: Engwirda, D.: JIGSAW-GEO (1.0): locally
orthogonal staggered unstructured grid generation for general circulation
modelling on the sphere, Geosci. Model Dev., 10, 2117-2140,
https://doi.org/10.5194/gmd-10-2117-2017, 201
Accelerated High-Resolution Photoacoustic Tomography via Compressed Sensing
Current 3D photoacoustic tomography (PAT) systems offer either high image
quality or high frame rates but are not able to deliver high spatial and
temporal resolution simultaneously, which limits their ability to image dynamic
processes in living tissue. A particular example is the planar Fabry-Perot (FP)
scanner, which yields high-resolution images but takes several minutes to
sequentially map the photoacoustic field on the sensor plane, point-by-point.
However, as the spatio-temporal complexity of many absorbing tissue structures
is rather low, the data recorded in such a conventional, regularly sampled
fashion is often highly redundant. We demonstrate that combining variational
image reconstruction methods using spatial sparsity constraints with the
development of novel PAT acquisition systems capable of sub-sampling the
acoustic wave field can dramatically increase the acquisition speed while
maintaining a good spatial resolution: First, we describe and model two general
spatial sub-sampling schemes. Then, we discuss how to implement them using the
FP scanner and demonstrate the potential of these novel compressed sensing PAT
devices through simulated data from a realistic numerical phantom and through
measured data from a dynamic experimental phantom as well as from in-vivo
experiments. Our results show that images with good spatial resolution and
contrast can be obtained from highly sub-sampled PAT data if variational image
reconstruction methods that describe the tissues structures with suitable
sparsity-constraints are used. In particular, we examine the use of total
variation regularization enhanced by Bregman iterations. These novel
reconstruction strategies offer new opportunities to dramatically increase the
acquisition speed of PAT scanners that employ point-by-point sequential
scanning as well as reducing the channel count of parallelized schemes that use
detector arrays.Comment: submitted to "Physics in Medicine and Biology
A fast and robust patient specific Finite Element mesh registration technique: application to 60 clinical cases
Finite Element mesh generation remains an important issue for patient
specific biomechanical modeling. While some techniques make automatic mesh
generation possible, in most cases, manual mesh generation is preferred for
better control over the sub-domain representation, element type, layout and
refinement that it provides. Yet, this option is time consuming and not suited
for intraoperative situations where model generation and computation time is
critical. To overcome this problem we propose a fast and automatic mesh
generation technique based on the elastic registration of a generic mesh to the
specific target organ in conjunction with element regularity and quality
correction. This Mesh-Match-and-Repair (MMRep) approach combines control over
the mesh structure along with fast and robust meshing capabilities, even in
situations where only partial organ geometry is available. The technique was
successfully tested on a database of 5 pre-operatively acquired complete femora
CT scans, 5 femoral heads partially digitized at intraoperative stage, and 50
CT volumes of patients' heads. The MMRep algorithm succeeded in all 60 cases,
yielding for each patient a hex-dominant, Atlas based, Finite Element mesh with
submillimetric surface representation accuracy, directly exploitable within a
commercial FE software
An efficient genetic algorithm for large-scale transmit power control of dense and robust wireless networks in harsh industrial environments
The industrial wireless local area network (IWLAN) is increasingly dense, due to not only the penetration of wireless applications to shop floors and warehouses, but also the rising need of redundancy for robust wireless coverage. Instead of simply powering on all access points (APs), there is an unavoidable need to dynamically control the transmit power of APs on a large scale, in order to minimize interference and adapt the coverage to the latest shadowing effects of dominant obstacles in an industrial indoor environment. To fulfill this need, this paper formulates a transmit power control (TPC) model that enables both powering on/off APs and transmit power calibration of each AP that is powered on. This TPC model uses an empirical one-slope path loss model considering three-dimensional obstacle shadowing effects, to enable accurate yet simple coverage prediction. An efficient genetic algorithm (GA), named GATPC, is designed to solve this TPC model even on a large scale. To this end, it leverages repair mechanism-based population initialization, crossover and mutation, parallelism as well as dedicated speedup measures. The GATPC was experimentally validated in a small-scale IWLAN that is deployed a real industrial indoor environment. It was further numerically demonstrated and benchmarked on both small- and large-scales, regarding the effectiveness and the scalability of TPC. Moreover, sensitivity analysis was performed to reveal the produced interference and the qualification rate of GATPC in function of varying target coverage percentage as well as number and placement direction of dominant obstacles. (C) 2018 Elsevier B.V. All rights reserved
A Vortex Method for Bi-phasic Fluids Interacting with Rigid Bodies
We present an accurate Lagrangian method based on vortex particles,
level-sets, and immersed boundary methods, for animating the interplay between
two fluids and rigid solids. We show that a vortex method is a good choice for
simulating bi-phase flow, such as liquid and gas, with a good level of realism.
Vortex particles are localized at the interfaces between the two fluids and
within the regions of high turbulence. We gain local precision and efficiency
from the stable advection permitted by the vorticity formulation. Moreover, our
numerical method straightforwardly solves the two-way coupling problem between
the fluids and animated rigid solids. This new approach is validated through
numerical comparisons with reference experiments from the computational fluid
community. We also show that the visually appealing results obtained in the CG
community can be reproduced with increased efficiency and an easier
implementation
Machine Learning Applications in Estimating Transformer Loss of Life
Transformer life assessment and failure diagnostics have always been
important problems for electric utility companies. Ambient temperature and load
profile are the main factors which affect aging of the transformer insulation,
and consequently, the transformer lifetime. The IEEE Std. C57.911995 provides a
model for calculating the transformer loss of life based on ambient temperature
and transformer's loading. In this paper, this standard is used to develop a
data-driven static model for hourly estimation of the transformer loss of life.
Among various machine learning methods for developing this static model, the
Adaptive Network-Based Fuzzy Inference System (ANFIS) is selected. Numerical
simulations demonstrate the effectiveness and the accuracy of the proposed
ANFIS method compared with other relevant machine learning based methods to
solve this problem.Comment: IEEE Power and Energy Society General Meeting, 201
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