Mapping Irrigated and Rainfed Wheat Areas Using Multi-Temporal Satellite Data

Irrigation is crucial to agriculture in arid and semi-arid areas and significantly contributes to crop development, food diversity and the sustainability of agro-ecosystems. For a specific crop, the separation of its irrigated and rainfed areas is difficult, because their phenology is similar and therefore less distinguishable, especially when there are phenology shifts due to various factors, such as elevation and latitude. In this study, we present a simple, but robust method to map irrigated and rainfed wheat areas in a semi-arid region of China. We used the Normalized Difference Vegetation Index (NDVI) at a 30 × 30 m spatial resolution derived from the Chinese HJ-1A/B (HuanJing(HJ) means environment in Chinese) satellite to create a time series spanning the whole growth period of wheat from September 2010 to July 2011. The maximum NDVI and time-integrated NDVI (TIN) that usually exhibit significant differences between irrigated and rainfed wheat were selected to establish a classification model using a support vector machine (SVM) algorithm. The overall accuracy of the Google-Earth testing samples was 96.0%, indicating that the classification results are accurate. The estimated irrigated-to-rainfed ratio was 4.4:5.6, close to the estimates provided by the agricultural sector in Shanxi Province. Our results illustrate that the SVM classification model can effectively avoid empirical thresholds in supervised classification and realistically capture the magnitude and spatial patterns of rainfed and irrigated wheat areas. The approach in this study can be applied to map irrigated/rainfed areas in other regions when field observational data are available

Mapping crop phenology using NDVI time-series derived from HJ-1 A/B data

With the availability of high frequent satellite data, crop phenology could be accurately mapped using time-series remote sensing data. Vegetation index time-series data derived from AVHRR, MODIS, and SPOT-VEGETATION images usually have coarse spatial resolution. Mapping crop phenology parameters using higher spatial resolution images (e.g., Landsat TM-like) is unprecedented. Recently launched HJ-1 A/B CCD sensors boarded on China Environment Satellite provided a feasible and ideal data source for the construction of high spatio-temporal resolution vegetation index time-series. This paper presented a comprehensive method to construct NDVI time-series dataset derived from HJ-1 A/B CCD and demonstrated its application in cropland areas. The procedures of time-series data construction included image preprocessing, signal filtering, and interpolation for daily NDVI images then the NDVI time-series could present a smooth and complete phenological cycle. To demonstrate its application, TIMESAT program was employed to extract phenology parameters of crop lands located in Guanzhong Plain, China. The small-scale test showed that the crop season start/end derived from HJ-1 A/B NDVI time-series was comparable with local agro-metrological observation. The methodology for reconstructing time-series remote sensing data had been proved feasible, though forgoing researches will improve this a lot in mapping crop phenology. Last but not least, further studies should be focused on field-data collection, smoothing method and phenology definitions using time-series remote sensing data

Integrated remote sensing imagery and two-dimensional hydraulic modeling approach for impact evaluation of flood on crop yields

The projected frequent occurrences of extreme flood events will cause significant losses to crops and will threaten food security. To reduce the potential risk and provide support for agricultural flood management, prevention, and mitigation, it is important to account for flood damage to crop production and to understand the relationship between flood characteristics and crop losses. A quantitative and effective evaluation tool is therefore essential to explore what and how flood characteristics will affect the associated crop loss, based on accurately understanding the spatiotemporal dynamics of flood evolution and crop growth. Current evaluation methods are generally integrally or qualitatively based on statistic data or ex-post survey with less diagnosis into the process and dynamics of historical flood events. Therefore, a quantitative and spatial evaluation framework is presented in this study that integrates remote sensing imagery and hydraulic model simulation to facilitate the identification of historical flood characteristics that influence crop losses. Remote sensing imagery can capture the spatial variation of crop yields and yield losses from floods on a grid scale over large areas; however, it is incapable of providing spatial information regarding flood progress. Two-dimensional hydraulic model can simulate the dynamics of surface runoff and accomplish spatial and temporal quantification of flood characteristics on a grid scale over watersheds, i.e., flow velocity and flood duration. The methodological framework developed herein includes the following: (a) Vegetation indices for the critical period of crop growth from mid-high temporal and spatial remote sensing imagery in association with agricultural statistics data were used to develop empirical models to monitor the crop yield and evaluate yield losses from flood; (b) The two-dimensional hydraulic model coupled with the SCS-CN hydrologic model was employed to simulate the flood evolution process, with the SCS-CN model as a rainfall-runoff generator and the two-dimensional hydraulic model implementing the routing scheme for surface runoff; and (c) The spatial combination between crop yield losses and flood dynamics on a grid scale can be used to investigate the relationship between the intensity of flood characteristics and associated loss extent. The modeling framework was applied for a 50-year return period flood that occurred in Jilin province, Northeast China, which caused large agricultural losses in August, 2013. The modeling results indicated that (a) the flow velocity was the most influential factor that caused spring corn, rice and soybean yield losses from extreme storm event in the mountainous regions; (b) the power function archived the best results that fit the velocity-loss relationship for mountainous areas; and (c) integrated remote sensing imagery and two-dimensional hydraulic modeling approach are helpful for evaluating the influence of historical flood event on crop production and investigating the relationship between flood characteristics and crop yield losses

Applications of satellite ‘hyper-sensing’ in Chinese agriculture:Challenges and opportunities

Ensuring adequate food supplies to a large and increasing population continues to be the key challenge for China. Given the increasing integration of China within global markets for agricultural products, this issue is of considerable significance for global food security. Over the last 50 years, China has increased the production of its staple crops mainly by increasing yield per unit land area. However, this has largely been achieved through inappropriate agricultural practices, which have caused environmental degradation, with deleterious consequences for future agricultural productivity. Hence, there is now a pressing need to intensify agriculture in China using practices that are environmentally and economically sustainable. Given the dynamic nature of crops over space and time, the use of remote sensing technology has proven to be a valuable asset providing end-users in many countries with information to guide sustainable agricultural practices. Recently, the field has experienced considerable technological advancements reflected in the availability of ‘hyper-sensing’ (high spectral, spatial and temporal) satellite imagery useful for monitoring, modelling and mapping of agricultural crops. However, there still remains a significant challenge in fully exploiting such technologies for addressing agricultural problems in China. This review paper evaluates the potential contributions of satellite ‘hyper-sensing’ to agriculture in China and identifies the opportunities and challenges for future work. We perform a critical evaluation of current capabilities in satellite ‘hyper-sensing’ in agriculture with an emphasis on Chinese sensors. Our analysis draws on a series of in-depth examples based on recent and on-going projects in China that are developing ‘hyper-sensing’ approaches for (i) measuring crop phenology parameters and predicting yields; (ii) specifying crop fertiliser requirements; (iii) optimising management responses to abiotic and biotic stress in crops; (iv) maximising yields while minimising water use in arid regions; (v) large-scale crop/cropland mapping; and (vi) management zone delineation. The paper concludes with a synthesis of these application areas in order to define the requirements for future research, technological innovation and knowledge exchange in order to deliver yield sustainability in China

Mapping Forest Cover in Northeast China from Chinese HJ-1 Satellite Data Using an Object-Based Algorithm

Forest plays a significant role in the global carbon budget and ecological processes. The precise mapping of forest cover can help significantly reduce uncertainties in the estimation of terrestrial carbon balance. A reliable and operational method is necessary for a rapid regional forest mapping. In this study, the goal relies on mapping forest and subcategories in Northeast China through the use of high spatio-temporal resolution HJ-1 imagery and time series vegetation indices within the context of an object-based image analysis and decision tree classification. Multi-temporal HJ-1 images obtained in a single year provide an opportunity to acquire phenology information. By analyzing the difference of spectral and phenology information between forest and non-forest, forest subcategories, decision trees using threshold values were finally proposed. The resultant forest map has a high overall accuracy of 0.91 ± 0.01 with a 95% confidence interval, based on the validation using ground truth data from field surveys. The forest map extracted from HJ-1 imagery was compared with two existing global land cover datasets: GlobCover 2009 and MCD12Q1 2009. The HJ-1-based forest area is larger than that of MCD12Q1 and GlobCover and more closely resembles the national statistics data on forest area, which accounts for more than 40% of the total area of the Northeast China. The spatial disagreement primarily occurs in the northern part of the Daxing'an Mountains, Sanjiang Plain and the southwestern part of the Songliao Plain. The compared result also indicated that the forest subcategories information from global land cover products may introduce large uncertainties for ecological modeling and these should be cautiously used in various ecological models. Given the higher spatial and temporal resolution, HJ-1-based forest products could be very useful as input to biogeochemical models (particularly carbon cycle models) that require accurate and updated estimates of forest area and type

Automated cropping intensity extraction from isolines of wavelet spectra

Timely and accurate monitoring of cropping intensity (CI) is essential to help us understand changes in food production. This paper aims to develop an automatic Cropping Intensity extraction method based on the Isolines of Wavelet Spectra (CIIWS) with consideration of intra- class variability. The CIIWS method involves the following procedures: (1) characterizing vegetation dynamics from time–frequency dimensions through a continuous wavelet transform performed on vegetation index temporal profiles; (2) deriving three main features, the skeleton width, maximum number of strong brightness centers and the intersection of their scale intervals, through computing a series of wavelet isolines from the wavelet spectra; and (3) developing an automatic cropping intensity classifier based on these three features. The proposed CIIWS method improves the understanding in the spectral–temporal properties of vegetation dynamic processes. To test its efficiency, the CIIWS method is applied to China’s Henan province using 250 m 8 days composite Moderate Resolution Imaging Spectroradiometer (MODIS) Enhanced Vegetation Index (EVI) time series datasets. An overall accuracy of 88.9% is achieved when compared with in-situ observation data. The mapping result is also evaluated with 30 m Chinese Environmental Disaster Reduction Satellite (HJ-1)-derived data and an overall accuracy of 86.7% is obtained. At county level, the MODIS-derived sown areas and agricultural statistical data are well correlated (r2 = 0.85). The merit and uniqueness of the CIIWS method is the ability to cope with the complex intra-class variability through continuous wavelet transform and efficient feature extraction based on wavelet isolines. As an objective and meaningful algorithm, it guarantees easy applications and greatly contributes to satellite observations of vegetation dynamics and food security efforts

Hydraulic correction method (HCM) to enhance the efficiency of SRTM DEM in flood modeling

Digital Elevation Model (DEM) is one of the most important controlling factors determining the simulation accuracy of hydraulic models. However, the currently available global topographic data is confronted with limitations for application in 2-D hydraulic modeling, mainly due to the existence of vegetation bias, random errors and insufficient spatial resolution. A hydraulic correction method (HCM) for the SRTM DEM is proposed in this study to improve modeling accuracy. Firstly, we employ the global vegetation corrected DEM (i.e. Bare-Earth DEM), developed from the SRTM DEM to include both vegetation height and SRTM vegetation signal. Then, a newly released DEM, removing both vegetation bias and random errors (i.e. Multi-Error Removed DEM), is employed to overcome the limitation of height errors. Last, an approach to correct the Multi-Error Removed DEM is presented to account for the insufficiency of spatial resolution, ensuring flow connectivity of the river networks. The approach involves: (a) extracting river networks from the Multi-Error Removed DEM using an automated algorithm in ArcGIS; (b) correcting the location and layout of extracted streams with the aid of Google Earth platform and Remote Sensing imagery; and (c) removing the positive biases of the raised segment in the river networks based on bed slope to generate the hydraulically corrected DEM. The proposed HCM utilizes easily available data and tools to improve the flow connectivity of river networks without manual adjustment. To demonstrate the advantages of HCM, an extreme flood event in Huifa River Basin (China) is simulated on the original DEM, Bare-Earth DEM, Multi-Error removed DEM, and hydraulically corrected DEM using an integrated hydrologic-hydraulic model. A comparative analysis is subsequently performed to assess the simulation accuracy and performance of four different DEMs and favorable results have been obtained on the corrected DEM

The effect of carotenoid candidate genes on the photosynthetic capacity of sorghum as assessed by Linkage Disequilibrium mapping

Carotenoids are accessory pigments that play roles in photosynthesis and photoprotection in plant leaves. Genetic studies to associate carotenoid candidate genes with variation in photosynthetic capacity however, have not been conducted. The objectives of this research project were to characterize the phenotypic variation of photosynthetic rate (A), effective quantum yield (πPSII), and photochemical quenching (qP) in sorghum (Sorghum bicolor L.), and to determine the level of association between phenotypic variation and polymorphisms in carotenoid candidate genes. A LI-COR 6400XT portable photosynthesis unit was used as a high-throughput assessment tool in all experiments. Preliminary studies were performed to evaluate experimental conditions that could potentially affect measured variation of leaf photosynthetic rate in sorghum. Results from those preliminary studies indicated that plant developmental stage, leaf section, radiation level, and CO2 concentration in the LI-COR chamber were important variables. The optimal conditions for photosynthetic measurements as determined in preliminary experiments were implemented in Linkage Disequilibrium (LD) mapping experiments. A carotenoid diversity panel consisting of 86 sorghum lines with known genetic variation for the carotenoid candidate genes Crtiso, Lcye, Hyd1, Hyd2, Zds, Ccd1, Nced3, Lcyb, Crtre, Pds, Psy1, and Psy3 was evaluated under controlled and field conditions. Genetic associations between markers in the carotenoid genes and photosynthetic phenotypes were established by GLM and MLM models which include corrections for population structure, kinship, and multiple comparisons. Multiple markers in three genes Crtiso, Ccd1, and Hyd1 were significantly associated with variation in photosynthetic rate and effective quantum yield in one or both environments. Individual markers explained between 5 to 8% of the phenotypic variation, as expected based on the genetic and physiological complexity of the trait under investigation. This study is, to our knowledge, the first investigation on the natural genetic variation in carotenoid candidate genes and their effect on the photosynthetic capacity of a crop species. This research project was also a proof of concept that LD mapping can be applied successfully to determine the genetic architecture of complex physiological traits such as photosynthesis

A Global Systematic Review of Improving Crop Model Estimations by Assimilating Remote Sensing Data: Implications for Small-Scale Agricultural Systems

There is a growing effort to use access to remote sensing data (RS) in conjunction with crop model simulation capability to improve the accuracy of crop growth and yield estimates. This is critical for sustainable agricultural management and food security, especially in farming communities with limited resources and data. Therefore, the objective of this study was to provide a systematic review of research on data assimilation and summarize how its application varies by country, crop, and farming systems. In addition, we highlight the implications of using process-based crop models (PBCMs) and data assimilation in small-scale farming systems. Using a strict search term, we searched the Scopus and Web of Science databases and found 497 potential publications. After screening for relevance using predefined inclusion and exclusion criteria, 123 publications were included in the final review. Our results show increasing global interest in RS data assimilation approaches; however, 81% of the studies were from countries with relatively high levels of agricultural production, technology, and innovation. There is increasing development of crop models, availability of RS data sources, and characterization of crop parameters assimilated into PBCMs. Most studies used recalibration or updating methods to mainly incorporate remotely sensed leaf area index from MODIS or Landsat into the WOrld FOod STudies (WOFOST) model to improve yield estimates for staple crops in large-scale and irrigated farming systems. However, these methods cannot compensate for the uncertainties in RS data and crop models. We concluded that further research on data assimilation using newly available high-resolution RS datasets, such as Sentinel-2, should be conducted to significantly improve simulations of rare crops and small-scale rainfed farming systems. This is critical for informing local crop management decisions to improve policy and food security assessments