Code Generation = A* + BURS

A system called BURS that is based on term rewrite systems and a search algorithm A* are combined to produce a code generator that generates optimal code. The theory underlying BURS is re-developed, formalised and explained in this work. The search algorithm uses a cost heuristic that is derived from the termrewrite system to direct the search. The advantage of using a search algorithm is that we need to compute only those costs that may be part of an optimal rewrite sequence

HUDDL for description and archive of hydrographic binary data

Many of the attempts to introduce a universal hydrographic binary data format have failed or have been only partially successful. In essence, this is because such formats either have to simplify the data to such an extent that they only support the lowest common subset of all the formats covered, or they attempt to be a superset of all formats and quickly become cumbersome. Neither choice works well in practice. This paper presents a different approach: a standardized description of (past, present, and future) data formats using the Hydrographic Universal Data Description Language (HUDDL), a descriptive language implemented using the Extensible Markup Language (XML). That is, XML is used to provide a structural and physical description of a data format, rather than the content of a particular file. Done correctly, this opens the possibility of automatically generating both multi-language data parsers and documentation for format specification based on their HUDDL descriptions, as well as providing easy version control of them. This solution also provides a powerful approach for archiving a structural description of data along with the data, so that binary data will be easy to access in the future. Intending to provide a relatively low-effort solution to index the wide range of existing formats, we suggest the creation of a catalogue of format descriptions, each of them capturing the logical and physical specifications for a given data format (with its subsequent upgrades). A C/C++ parser code generator is used as an example prototype of one of the possible advantages of the adoption of such a hydrographic data format catalogue

Contributions of formal language theory to the study of dialogues

For more than 30 years, the problem of providing a formal framework for modeling dialogues has been a topic of great interest for the scientific areas of Linguistics, Philosophy, Cognitive Science, Formal Languages, Software Engineering and Artificial Intelligence. In the beginning the goal was to develop a "conversational computer", an automated system that could engage in a conversation in the same way as humans do. After studies showed the difficulties of achieving this goal Formal Language Theory and Artificial Intelligence have contributed to Dialogue Theory with the study and simulation of machine to machine and human to machine dialogues inspired by Linguistic studies of human interactions. The aim of our thesis is to propose a formal approach for the study of dialogues. Our work is an interdisciplinary one that connects theories and results in Dialogue Theory mainly from Formal Language Theory, but also from another areas like Artificial Intelligence, Linguistics and Multiprogramming. We contribute to Dialogue Theory by introducing a hierarchy of formal frameworks for the definition of protocols for dialogue interaction. Each framework defines a transition system in which dialogue protocols might be uniformly expressed and compared. The frameworks we propose are based on finite state transition systems and Grammar systems from Formal Language Theory and a multi-agent language for the specification of dialogue protocols from Artificial Intelligence. Grammar System Theory is a subfield of Formal Language Theory that studies how several (a finite number) of language defining devices (language processors or grammars) jointly develop a common symbolic environment (a string or a finite set of strings) by the application of language operations (for instance rewriting rules). For the frameworks we propose we study some of their formal properties, we compare their expressiveness, we investigate their practical application in Dialogue Theory and we analyze their connection with theories of human-like conversation from Linguistics. In addition we contribute to Grammar System Theory by proposing a new approach for the verification and derivation of Grammar systems. We analyze possible advantages of interpreting grammars as multiprograms that are susceptible of verification and derivation using the Owicki-Gries logic, a Hoare-based logic from the Multiprogramming field

More SPASS with Isabelle: superposition with hard sorts and configurable simplification

Sledgehammer for Isabelle/HOL integrates automatic theorem provers to discharge interactive proof obligations. This paper considers a tighter integration of the superposition prover SPASS to increase Sledgehammer’s success rate. The main enhancements are native support for hard sorts (simple types) in SPASS, simplification that honors the orientation of Isabelle simp rules, and a pair of clause-selection strategies targeted at large lemma libraries. The usefulness of this integration is confirmed by an evaluation on a vast benchmark suite and by a case study featuring a formalization of language-based security

The potential for targeted rewriting of epigenetic marks in COPD as a new therapeutic approach

Chronic obstructive pulmonary disease (COPD) is an age and smoking related progressive, pulmonary disorder presenting with poorly reversible airflow limitation as a result of chronic bronchitis and emphysema. The prevalence, disease burden for the individual, and mortality of COPD continues to increase, whereas no effective treatment strategies are available. For many years now, a combination of bronchodilators and anti-inflammatory corticosteroids has been most widely used for therapeutic management of patients with persistent COPD. However, this approach has had disappointing results as a large number of COPD patients are corticosteroid resistant. In patients with COPD, there is emerging evidence showing aberrant expression of epigenetic marks such as DNA methylation, histone modifications and microRNAs in blood, sputum and lung tissue. Therefore, novel therapeutic approaches may exist using epigenetic therapy. This review aims to describe and summarize current knowledge of aberrant expression of epigenetic marks in COPD. In addition, tools available for restoration of epigenetic marks are described, as well as delivery mechanisms of epigenetic editors to cells. Targeting epigenetic marks might be a very promising tool for treatment and lung regeneration in COPD in the future

The SUMER Data in the SOHO Archive

We have released an archive of all observational data of the VUV spectrometer Solar Ultraviolet Measurements of Emitted Radiation (SUMER) on SOHO that has been acquired until now. The operational phase started with 'first light' observations on 27 January 1996 and will end in 2014. Future data will be added to the archive when they become available. The archive consists of a set of raw data (Level 0) and a set of data that are processed and calibrated to the best knowledge we have today (Level 1). This communication describes step by step the data acquisition and processing that has been applied in an automated manner to build the archive. It summarizes the expertise and insights into the scientific use of SUMER spectra that has accumulated over the years. It also indicates possibilities for further enhancement of the data quality. With this article we intend to convey our own understanding of the instrument performance to the scientific community and to introduce the new, standard-FITS-format database.Comment: 38 pages, 9 figures, accepted for publication by Solar Physic

Leveraging service-oriented business applications to a rigorous rule-centric dynamic behavioural architecture.

Today’s market competitiveness and globalisation are putting pressure on organisations to join their efforts, to focus more on cooperation and interaction and to add value to their businesses. That is, most information systems supporting these cross-organisations are characterised as service-oriented business applications, where all the emphasis is put on inter-service interactions rather than intra-service computations. Unfortunately for the development of such inter-organisational service-oriented business systems, current service technology proposes only ad-hoc, manual and static standard web-service languages such as WSDL, BPEL and WS-CDL [3, 7]. The main objective of the work reported in this thesis is thus to leverage the development of service-oriented business applications towards more reliability and dynamic adaptability, placing emphasis on the use of business rules to govern activities, while composing services. The best available software-engineering techniques for adaptability, mainly aspect-oriented mechanisms, are also to be integrated with advanced formal techniques. More specifically, the proposed approach consists of the following incremental steps. First, it models any business activity behaviour governing any service-oriented business process as Event-Condition-Action (ECA) rules. Then such informal rules are made more interaction-centric, using adapted architectural connectors. Third, still at the conceptual-level, with the aim of adapting such ECA-driven connectors, this approach borrows aspect-oriented ideas and mechanisms, and proposes to intercept events, select the properties required for interacting entities, explicitly and separately execute such ECA-driven behavioural interactions and finally dynamically weave the results into the entities involved. To ensure compliance and to preserve the implementation of this architectural conceptualisation, the work adopts the Maude language as an executable operational formalisation. For that purpose, Maude is first endowed with the notions of components and interfaces. Further, the concept of ECA-driven behavioural interactions are specified and implemented as aspects. Finally, capitalising on Maude reflection, the thesis demonstrates how to weave such interaction executions into associated services