Assessment of Sentinel-2 and Landsat-8 OLI for Small-Scale Inland Water Quality Modeling and Monitoring Based on Handheld Hyperspectral Ground Truthing

This study investigates the best available methods for remote monitoring inland small-scale waterbodies, using remote sensing data from both Landsat-8 and Sentinel-2 satellites, utilizing a handheld hyperspectral device for ground truthing. Monitoring was conducted to evaluate water quality indicators: chlorophyll-a (Chl-a), colored dissolved organic matter (CDOM), and turbidity. Ground truthing was performed to select the most suitable atmospheric correction technique (ACT). Several ACT have been tested: dark spectrum fitting (DSF), dark object subtraction (DOS), atmospheric and topographic correction (ATCOR), and exponential extrapolation (EXP). Classical sampling was conducted first; then, the resulting concentrations were compared to those obtained using remote sensing analysis by the above-mentioned ACT. This research revealed that DOS and DSF achieved the best performance (an advantage ranging between 29% and 47%). Further, we demonstrated the appropriateness of the use of Sentinel-2 red and vegetation red edge reciprocal bands (1/(B4 X B6)) for estimating Chl-a (R2 = 0.82, RMSE = 14.52mg/m3). As for Landsat-8, red to near-infrared ratio (B4/B5) produced the best performing model (R2 = 0.71, RMSE = 39.88 mg/m3), but it did not perform as well as Sentinel-2. Regarding turbidity, the best model (with (R2 =0.85, RMSE = 0.87 NTU) obtained by Sentinel-2 utilized a single band (B4), while the best model (with R2 = 0.64, RMSE = 0.90 NTU) using Landsat-8 was performed by applying two bands (B1/B3). Mapping the water quality parameters using the best performance biooptical model showed the significant effect of the adjacent land on the boundary pixels compared to pixels of deeper water

Towards high fidelity mapping of global inland water quality using earth observation data

This body of work aims to contribute advancements towards developing globally applicable water quality retrieval models using Earth Observation data for freshwater systems. Eutrophication and increasing prevalence of potentially toxic algal blooms among global inland water bodies have become a major ecological concersn and require direct attention. There is now a growing necessity to develop pragmatic approaches that allow timely and effective extrapolation of local processes, to spatially resolved global products. This study provides one of the first assessments of the state-ofthe-art for trophic status (chlorophyll-a) retrievals for small water bodies using Sentinel-3 Ocean and Land Color Imager (OLCI). Multiple fieldwork campaigns were undertaken for the collection of common aquatic biogeophysical and bio-optical parameters that were used to validate current atmospheric correction and chlorophyll-a retrieval algorithms. The study highlighted the difficulties of obtaining robust retrieval estimates from a coarse spatial resolution sensor from highly variable eutrophic water bodies. Atmospheric correction remains a difficult challenge to operational freshwater monitoring, however, the study further validated previous work confirming applicability of simple, empirically derived retrieval algorithms using top-of-atmosphere data. The apparent scarcity of paired in-situ optical and biogeophysical data for productive inland waters also hinders our capability to develop and validate robust retrieval algorithms. Radiative transfer modeling was used to fill this gap through the development of a novel synthetic dataset of top-of-atmosphere and bottom-of-atmosphere reflectances, which attempts to encompass the immense natural optical variability present in inland waters. Novel aspects of the synthetic dataset include: 1) physics-based, two-layered, size and type specific phytoplankton IOPs for mixed eukaryotic/cyanobacteria 6 assemblages, 2) calculations of mixed assemblage chl-a fluorescence, 3) modeled phycocyanin concentration derived from assemblage based phycocyanin absorption, 4) and paired sensor-specific TOA reflectances which include optically extreme cases and contribution of green vegetation adjacency. The synthetic bottom-of-atmosphere reflectance spectra were compiled into 13 distinct optical water types similar to those discovered using in-situ data. Inspection showed similar relationships and ranges of concentrations and inherent optical properties of natural waters. This dataset was used to calculate typical surviving water-leaving signal at top-of-atmosphere, as well as first order calculations of the signal-to-noise-ratio (SNR) for the various optical water types, a first for productive inland waters, as well as conduct a sensitivity analysis of cyanobacteria detection from top-of-atmosphere. Finally, the synthetic dataset was used to train and test four state-of-the-art machine learning architectures for multi-parameter retrieval and cross-sensor capability. Initial results provide reliable estimates of water quality parameters and inherent optical properties over a highly dynamic range of water types, at various spectral and spatial sensor resolutions. It is hoped the results of this work incrementally improves inland water Earth observation on multiple aspects of the forward and inverse modelling process, and provides an improvement in our capabilities for routine, global monitoring of inland water quality

The Use of Sentinel-2 for Chlorophyll-a Spatial Dynamics Assessment: A Comparative Study on Different Lakes in Northern Germany

Eutrophication of inland waters is an environmental issue that is becoming more common with climatic variability. Monitoring of this aquatic problem is commonly based on the chlorophyll-a concentration monitored by routine sampling with limited temporal and spatial coverage. Remote sensing data can be used to improve monitoring, especially after the launch of the MultiSpectral Instrument (MSI) on Sentinel-2. In this study, we compared the estimation of chlorophyll-a (chl-a) from different bio-optical algorithms using hyperspectral proximal remote sensing measurements, from simulated MSI responses and from an MSI image. For the satellite image, we also compare different atmospheric corrections routines before the comparison of different bio-optical algorithms. We used in situ data collected in 2019 from 97 sampling points across 19 different lakes. The atmospheric correction assessment showed that the performances of the routines varied for each spectral band. Therefore, we selected C2X, which performed best for bands 4 (root mean square error—RMSE = 0.003), 5 (RMSE = 0.004) and 6 (RMSE = 0.002), which are usually used for the estimation of chl-a. Considering all samples from the 19 lakes, the best performing chl-a algorithm and calibration achieved a RMSE of 16.97 mg/m3. When we consider only one lake chain composed of meso-to-eutrophic lakes, the performance improved (RMSE: 10.97 mg/m3). This shows that for the studied meso-to-eutrophic waters, we can reliably estimate chl-a concentration, whereas for oligotrophic waters, further research is needed. The assessment of chl-a from space allows us to assess spatial dynamics of the environment, which can be important for the management of water resources. However, to have an accurate product, similar optical water types are important for the overall performance of the bio-optical algorithm

Sathyendranath S., Bracher A., Brockmann C., Platt T., Ramon D., Regner P. (2017) Colour and Light in the Ocean (CLEO) 2016: A Scientific Roadmap from the CLEO Workshop Organised by ESA and PML. Held at ESRIN, Frascati, Italy on 6 - 8 September, 2016.

The Colour and Light in the Ocean (CLEO) Workshop, organized by the European Space Agency (ESA) and the Plymouth Marine Laboratory (PML) was held on the ESRIN, the ESA Centre for Earth Observations, at Frascati, Italy on 6-8 September 2016. The workshop is sponsored through selected SEOM (Scientific Exploitation of Operational Missions) projects, including: Pools of Carbon in the Ocean (POCO), Photosynthetically Active Radiation and Primary Production (PPP), Synergistic Exploitation of Hyper- and Multispectral Sentinel-Measurements to Determine Phytoplankton Functional Types (PFT) (SynSenPFT), and Extreme Case-2 Waters (C2X). Additional partner projects of ESA are: Marine Photosynthesis Parameters from Space (MAPPS), a Pathfinder STSE (Support to Science Element) project; and Ocean Colour Climate Change Initiative (OC-CCI) through the CCI (Climate Change Initiative). The objectives of the workshop were to: Evaluate state-of-art Exchange information with other relevant projects and activities Bring together remote sensing community, in situ data providers, modellers and other users Explore applications in marine ecosystem models Plan for the future: Identify challenge areas and research priorities for future EO data exploitation activities Discuss key science issues and make recommendations to strengthen community engagement Shape ideas for potential new ocean-colour products to be developed in the era of the Sentinel-3 mission The workshop was organized in five themes, developed around the activities of the sponsoring projects. Each t heme had oral, poster and discussion sessions. The workshop attracted some 160 registered participants. The workshop served an important need to connect the community, to provide a forum for lively exchange of ideas, and to recommend priorities for future activities in a collective manner. The workshop brought together scientists working on development of novel products from ocean-colour data and the user community, including, notably, the modeling community. One of the key outputs of the workshop is this report, which provides the Scientific Roadmap for future activities. Another planned outcome is a Special Issue on Colour and Light in the Oceans, to be published in the Journal, which will highlight the major scientific results presented at the workshop. Each section of the report, dealing with one of the themes of the workshop, is self-contained, but cross-references to other sections are provided where appropriate. Some recommendations found common resonance across sections, such as the need for continuous, consistent, ocean-colour data streams from satellites for long-term monitoring of the marine ecosystem; the need for an integrated approach, bringing together the remote-sensing community, the in situ data providers and the modeling community; the need to promote development of novel products and advanced sensors; and the importance of providing high-quality and uninterrupted support to the user community, through easy and free access to data and products. Each section discusses the current state of the art, identifies user requirements and gaps, and priorities for research in the short and medium terms. The workshop served the important function of sounding the community’s aspirations, and presenting them in a concise manner for ESA, through this Scientific Roadmap. One of the recommendations from the participants was that CLEO workshops be organized on a regular basis in the future, to develop the ocean-colour community , to promote exchange of new results and ideas, and to plan future activities. We thank all workshop participants, keynote speakers, authors of the oral presentations and the posters, the Scientific Committee and the Organising Committee, and the Session Chairs for all their contributions to the workshop. For the logistical support and local organization and hospitality, we thank the ESRIN Graphics Bureau, Administration, Catering Service and the Events Office, especially Irene Renis, Anne Lisa Pichler and Giulia Vinicola

Feasibility Study for an Aquatic Ecosystem Earth Observing System Version 1.2.

International audienceMany Earth observing sensors have been designed, built and launched with primary objectives of either terrestrial or ocean remote sensing applications. Often the data from these sensors are also used for freshwater, estuarine and coastal water quality observations, bathymetry and benthic mapping. However, such land and ocean specific sensors are not designed for these complex aquatic environments and consequently are not likely to perform as well as a dedicated sensor would. As a CEOS action, CSIRO and DLR have taken the lead on a feasibility assessment to determine the benefits and technological difficulties of designing an Earth observing satellite mission focused on the biogeochemistry of inland, estuarine, deltaic and near coastal waters as well as mapping macrophytes, macro-algae, sea grasses and coral reefs. These environments need higher spatial resolution than current and planned ocean colour sensors offer and need higher spectral resolution than current and planned land Earth observing sensors offer (with the exception of several R&D type imaging spectrometry satellite missions). The results indicate that a dedicated sensor of (non-oceanic) aquatic ecosystems could be a multispectral sensor with ~26 bands in the 380-780 nm wavelength range for retrieving the aquatic ecosystem variables as well as another 15 spectral bands between 360-380 nm and 780-1400 nm for removing atmospheric and air-water interface effects. These requirements are very close to defining an imaging spectrometer with spectral bands between 360 and 1000 nm (suitable for Si based detectors), possibly augmented by a SWIR imaging spectrometer. In that case the spectral bands would ideally have 5 nm spacing and Full Width Half Maximum (FWHM), although it may be necessary to go to 8 nm wide spectral bands (between 380 to 780nm where the fine spectral features occur -mainly due to photosynthetic or accessory pigments) to obtain enough signal to noise. The spatial resolution of such a global mapping mission would be between ~17 and ~33 m enabling imaging of the vast majority of water bodies (lakes, reservoirs, lagoons, estuaries etc.) larger than 0.2 ha and ~25% of river reaches globally (at ~17 m resolution) whilst maintaining sufficient radiometric resolution

First results of phytoplankton spatial dynamics in two NW-Mediterranean bays from Chlorophyll-a estimates using Sentinel 2: potential implications for aquaculture

Shellfish aquaculture has a major socioeconomic impact on coastal areas, thus it is necessary to develop support tools for its management. In this sense, phytoplankton monitoring is crucial, as it is the main source of food for shellfish farming. The aim of this study was to assess the applicability of Sentinel 2 multispectral imagery (MSI) to monitor the phytoplankton biomass at Ebro Delta bays and to assess its potential as a tool for shellfish management. In situ chlorophyll-a data from Ebro Delta bays (NE Spain) were coupled with several band combination and band ratio spectral indices derived from Sentinel 2A levels 1C and 2A for time-series mapping. The best results (AIC = 72.17, APD < 10%, and MAE < 0.7 mg/m3) were obtained with a simple blue-to-green ratio applied over Rayleigh corrected images. Sentinel 2–derived maps provided coverage of the farm sites at both bays allowing relating the spatiotemporal distribution of phytoplankton with the environmental forcing under different states of the bays. The applied methodology will be further improved but the results show the potential of using Sentinel 2 MSI imagery as a tool for assessing phytoplankton spatiotemporal dynamics and to encourage better future practices in the management of the aquaculture in Ebro Delta bays.info:eu-repo/semantics/publishedVersio

Long-Term Monitoring of Inland Water Quality Parameters Using Landsat Time-Series and Back-Propagated ANN: Assessment and Usability in a Real-Case Scenario

[EN] Water scarcity and quality deterioration, driven by rapid population growth, urbanization, and intensive industrial and agricultural activities, emphasize the urgency for effective water management. This study aims to develop a model to comprehensively monitor various water quality parameters (WQP) and evaluate the feasibility of implementing this model in real-world scenarios, addressing the limitations of conventional in-situ sampling. Thus, a comprehensive model for monitoring WQP was developed using a 38-year dataset of Landsat imagery and in-situ data from the Water Information System of Europe (WISE), employing Back-Propagated Artificial Neural Networks (ANN). Correlation analyses revealed strong associations between remote sensing data and various WQPs, including Total Suspended Solids (TSS), chlorophyll-a (chl-a), Dissolved Oxygen (DO), Total Nitrogen (TN), and Total Phosphorus (TP). Optimal band combinations for each parameter were identified, enhancing the accuracy of the WQP estimation. The ANN-based model exhibited very high accuracy, particularly for chl-a and TSS (R2 > 0.90, NRMSE < 0.79%), surpassing previous studies. The independent validation showcased accurate classification for TSS and TN, while DO estimation faced challenges during high variation periods, highlighting the complexity of DO dynamics. The usability of the developed model was successfully tested in a real-case scenario, proving to be an operational tool for water management. Future research avenues include exploring additional data sources for improved model accuracy, potentially enhancing predictions and expanding the model’s utility in diverse environmental contexts.S

Lähi-kaugseire meetodite arendamine veekogude seisundi hindamiseks

Väitekirja elektrooniline versioon ei sisalda publikatsioone.Veekogude kvaliteedi hindamine on inimkonnale oluline olnud juba tuhandeid aastaid ja viimastel aastakümnetel on rohkem tähelepanu hakatud pöörama ka veekogude ökoloogilisele seisundile. Euroopas on veekogude kvaliteedi hindamise aluseks kaks dokumenti: Euroopa Liidu Vee Raamdirektiiv ja Euroopa Liidu Merestrateegia Raamdirektiiv. Mõlemad dokumendid sätestavad, et aastaks 2020 tuleb Euroopa Liidu veekogudes saavutada „hea“ seisund. Nende eesmärkide täitmiseks tuleb regulaarselt veekogude seisundit seirata. Kuivõrd kõikidelt veekogudelt veeproovide võtmine ja laboris analüüsimine ei ole võimalik (liigne raha ja tööjõukulu) ning lisaks ei anna sellised proovid ülevaadet veekogu seisundi parameetrite ruumilise jaotuse kohta tuleb appi võtta optilised instrumendid. Lisaks välitöödel kasutatavale optikale on Copernicus programmi raames järgnevatel aastakümnetel kättesaadav ka mitu erinevat satelliiditulemit. Nende tulemite kasutamiseks peab aga pidevalt nende täpsust hindama ja leidma täpsemaid arvutusmeetmeid, mis sobiksid konkreetsete parameetrite hindamiseks. Töö käigus tõestati, et vee optilised omadused, nagu neeldumine ja hajumine, varieeruvad Läänemere rannikuosas rohkem, kui on variatsioon ranniku ja mere keskosa vahel. Lisaks absoluutväärtuste erinevusele tuvastati ka spektraalse kuju muutusi eri piirkondade vahel. Tõestati, et elektromagnetkiirguse lähisinfrapuna piirkonda saab rakendada veekogude seires (tavaliselt eeldatakse, et selles spektripiirkonnas on veest tulev signaal null) ja eriti on see kasulik ohtralt lahustunud orgaanikat sisaldavate järvede seires. Testiti ja pakuti välja sobivaid kaugseire algoritme Läänemere vee kvaliteedi parameetrite hindamiseks. Analüüsiti erinevate spektromeetrite tulemuste varieeruvust ja leiti, et mõõtmisprotokolli korrektsel jälgimisel on erinevate sensorite tulemused küll erinevad, ent seire teostamiseks piisavalt sarnased. Lõpetuseks uuriti, millised on erinevate käsispektromeetrite potentsiaalsed rakendused.Knowing the quality of different waterbodies has been essential for human kind for thousands of years. There are two main European Union’s documents guiding the status assessment of water bodies: Water Framework Directive and Marine Strategy Framework Directive. Both of these documents state that all waterbodies in the European Union have to achieve “good” status by the year 2020. In order to fulfil this requirement, water bodies have to be monitored in regular bases. It is impossible to collect laboratory samples from every waterbody as it would be too expensive and would require many workers and still wouldn’t provide information about the spatial distribution of water quality parameters within each waterbody. Optical instruments can provide data fast and over larger areas and therefore have to be included in the monitoring programs. In addition to devices used at the in situ measurements are several satellite products that are available through Copernicus program for the coming decades. These products must, however, be constantly validated with in situ measurements. Additionally, new calculation methods have to be developed to improve the results precision. During this thesis, the variability of optical properties (like absorption and scattering) was assessed in the Baltic Sea. It was studied how much this variability influences the reflectance signal that reaches water remote sensing instruments. The performance of different set-ups and protocols of field spectrometers to collect reflectance data was assessed. The possibility to use near-infrared part of the spectrum in water remote sensing was investigated. In extreme absorbing lakes this is the only part of radiation providing us information about the water properties, but it proved to be useful also in other waterbodies. The performance of many remote sensing algorithms in retrieving water quality parameters in the Baltic Sea was tested. The possible applications for hand-held spectrometers were investigated

Deriving water quality parameters using sentinel-2 imagery: A case study in the Sado Estuary, Portugal

Monitoring water quality parameters and their ecological effects in transitional waters is usually performed through in situ sampling programs. These are expensive and time-consuming, and often do not represent the total area of interest. Remote sensing techniques offer enormous advantages by providing cost-effective systematic observations of a large water system. This study evaluates the potential of water quality monitoring using Sentinel-2 observations for the period 2018-2020 for the Sado estuary (Portugal), through an algorithm intercomparison exercise and time-series analysis of different water quality parameters (i.e., colored dissolved organic matter (CDOM), chlorophyll-a (Chl-a), suspended particulate matter (SPM), and turbidity). Results suggest that Sentinel-2 is useful for monitoring these parameters in a highly dynamic system, however, with challenges in retrieving accurate data for some of the variables, such as Chl-a. Spatio-temporal variability results were consistent with historical data, presenting the highest values of CDOM, Chl-a, SPM and turbidity during Spring and Summer. This work is the first study providing annual and seasonal coverage with high spatial resolution (10 m) for the Sado estuary, being a key contribution for the definition of effective monitoring programs. Moreover, the potential of remote sensing methodologies for continuous water quality monitoring in transitional systems under the scope of the European Water Framework Directive is briefly discussed.Fil: Sent, Giulia. Universidade Nova de Lisboa; PortugalFil: Biguino, Beatriz. Universidade Nova de Lisboa; PortugalFil: Favareto, Luciane. Universidade Nova de Lisboa; PortugalFil: Cruz, Joana. Universidade Nova de Lisboa; PortugalFil: Sá, Carolina. Universidade Nova de Lisboa; PortugalFil: Dogliotti, Ana Inés. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Astronomía y Física del Espacio. - Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Astronomía y Física del Espacio; ArgentinaFil: Palma, Carla. Instituto Hidrográfico; PortugalFil: Brotas, Vanda. Universidade Nova de Lisboa; PortugalFil: Brito, Ana C.. Universidade Nova de Lisboa; Portuga

Towards the Combination of C2RCC Processors for Improving Water Quality Retrieval in Inland and Coastal Areas

Sentinel-2 offers great potential for monitoring water quality in inland and coastal waters. However, atmospheric correction in these waters is challenging, and there is no standardized approach yet, but different methods coexist under constant development. The atmospheric correction Case 2 Regional Coast Colour (C2RCC) processor has been recently updated with the C2X-COMPLEX (C2XC). This study is one of the first attempts at exploring its performance, in comparison with C2RCC and C2X, in inland and coastal waters in the east of the Iberian Peninsula, in retrieving water surface reflectance and estimating chlorophyll-a ([Chl-a]), total suspended matter ([TSM]), and Secchi disk depth (ZSD). The relationship between in situ ZSD and Kd_z90max product (i.e., the depth of the water column from which 90% of the water-leaving irradiance is derived) of the C2RCC processors demonstrated the potential of this product for estimating water clarity (r > 0.75). However, [TSM] and [Chl-a] derived from the different processors with default calibration factors were not suitable within the targeted scenarios, requiring recalibration based on optical water types or a shift to dynamic algorithm blending approaches. This would benefit from switching between C2RCC and C2XC, which extends the potential for improving surface reflectance estimates to a wide range of scenarios and suggests a promising future for C2-Nets in operational monitoring of water quality.info:eu-repo/semantics/publishedVersio