Uncovering a generalised gamma distribution: from shape to interpretation

In this paper, we introduce the flexible interpretable gamma (FIG) distribution which has been derived by Weibullisation of the body-tail generalised normal distribution. The parameters of the FIG have been verified graphically and mathematically as having interpretable roles in controlling the left-tail, body, and right-tail shape. The generalised gamma (GG) distribution has become a staple model for positive data in statistics due to its interpretable parameters and tractable equations. Although there are many generalised forms of the GG which can provide better fit to data, none of them extend the GG so that the parameters are interpretable. Additionally, we present some mathematical characteristics and prove the identifiability of the FIG parameters. Finally, we apply the FIG model to hand grip strength and insurance loss data to assess its flexibility relative to existing models

Phoneme segmentation and Voice activity detection

This internship was intended to be a continuation of my work last year with the same team, whose focus is non-linear methods for complex signal analysis using concepts of scale invariance and particularly the development of a new multiscale microcanonical formalism (MMF). While the fields of application of this new formalism are diverse, one of them is speech processing. My contribution was exploratory research into innovative methods for text-independent phoneme segmentation which conform to a "linear" model, the goal being to provide a performance comparison with the "non-linear" MMF-based methods under development by the other team members. This year I focused on two areas: a continuation of last year's work in phoneme segmentation, and implementation of voice activity detection algorithms. For the continuation of last year's work, I performed experiments with more rigor in order to better understand the results I obtained last year. I re-examined the algorithms I implemented last year and corrected discrepancies, and brought the implementations closer into line with standard practice. Some of the work to this end is described in a section in the Appendix A. I performed the requisite experiments to evaluate the performance of these methods on a standard database used for phoneme segmentation. I continued past this point with experiments on two other segmentation methods, in preparation for publication of a comprehensive journal paper. I made improvements to the functioning some of these methods, and in some instances I was able to improve the performance of the algorithms. In addition to phoneme segmentation, the team is interested in applying the MMF to the field of Voice Activity Detection (VAD). It was desired that I implement several so-called "classical" VAD algorithms to serve as a basis for comparison for the new, non-linear algorithms which will be developed by the team in the future. As such I implemented four VAD algorithms commonly used as references in the literature to function as a standard reference for the new methods being developed. Further, I implemented a framework for evaluation of VAD algorithms. This consisted in devising methods for generating test databases for use in evaluating the performance of VAD algorithms and implementing them in code. Also under this effort, I wrote programs for scoring the output of these algorithms. I adapted existing code for two standard VADs to function within this framework, and finally evaluated these VADs under different conditions

Predictive cognition in dementia: the case of music

The clinical complexity and pathological diversity of neurodegenerative diseases impose immense challenges for diagnosis and the design of rational interventions. To address these challenges, there is a need to identify new paradigms and biomarkers that capture shared pathophysiological processes and can be applied across a range of diseases. One core paradigm of brain function is predictive coding: the processes by which the brain establishes predictions and uses them to minimise prediction errors represented as the difference between predictions and actual sensory inputs. The processes involved in processing unexpected events and responding appropriately are vulnerable in common dementias but difficult to characterise. In my PhD work, I have exploited key properties of music – its universality, ecological relevance and structural regularity – to model and assess predictive cognition in patients representing major syndromes of frontotemporal dementia – non-fluent variant PPA (nfvPPA), semantic-variant PPA (svPPA) and behavioural-variant FTD (bvFTD) - and Alzheimer’s disease relative to healthy older individuals. In my first experiment, I presented patients with well-known melodies containing no deviants or one of three types of deviant - acoustic (white-noise burst), syntactic (key-violating pitch change) or semantic (key-preserving pitch change). I assessed accuracy detecting melodic deviants and simultaneously-recorded pupillary responses to these deviants. I used voxel-based morphometry to define neuroanatomical substrates for the behavioural and autonomic processing of these different types of deviants, and identified a posterior temporo-parietal network for detection of basic acoustic deviants and a more anterior fronto-temporo-striatal network for detection of syntactic pitch deviants. In my second chapter, I investigated the ability of patients to track the statistical structure of the same musical stimuli, using a computational model of the information dynamics of music to calculate the information-content of deviants (unexpectedness) and entropy of melodies (uncertainty). I related these information-theoretic metrics to performance for detection of deviants and to ‘evoked’ and ‘integrative’ pupil reactivity to deviants and melodies respectively and found neuroanatomical correlates in bilateral dorsal and ventral striatum, hippocampus, superior temporal gyri, right temporal pole and left inferior frontal gyrus. Together, chapters 3 and 4 revealed new hypotheses about the way FTD and AD pathologies disrupt the integration of predictive errors with predictions: a retained ability of AD patients to detect deviants at all levels of the hierarchy with a preserved autonomic sensitivity to information-theoretic properties of musical stimuli; a generalized impairment of surprise detection and statistical tracking of musical information at both a cognitive and autonomic levels for svPPA patients underlying a diminished precision of predictions; the exact mirror profile of svPPA patients in nfvPPA patients with an abnormally high rate of false-alarms with up-regulated pupillary reactivity to deviants, interpreted as over-precise or inflexible predictions accompanied with normal cognitive and autonomic probabilistic tracking of information; an impaired behavioural and autonomic reactivity to unexpected events with a retained reactivity to environmental uncertainty in bvFTD patients. Chapters 5 and 6 assessed the status of reward prediction error processing and updating via actions in bvFTD. I created pleasant and aversive musical stimuli by manipulating chord progressions and used a classic reinforcement-learning paradigm which asked participants to choose the visual cue with the highest probability of obtaining a musical ‘reward’. bvFTD patients showed reduced sensitivity to the consequence of an action and lower learning rate in response to aversive stimuli compared to reward. These results correlated with neuroanatomical substrates in ventral and dorsal attention networks, dorsal striatum, parahippocampal gyrus and temporo-parietal junction. Deficits were governed by the level of environmental uncertainty with normal learning dynamics in a structured and binarized environment but exacerbated deficits in noisier environments. Impaired choice accuracy in noisy environments correlated with measures of ritualistic and compulsive behavioural changes and abnormally reduced learning dynamics correlated with behavioural changes related to empathy and theory-of-mind. Together, these experiments represent the most comprehensive attempt to date to define the way neurodegenerative pathologies disrupts the perceptual, behavioural and physiological encoding of unexpected events in predictive coding terms

The selective updating of working memory: a predictive coding account

Goal-relevant information maintained in working memory is remarkably robust and resistant to distractions. However, our nervous system is endowed with exceptional flexibility; therefore such information can be updated almost effortlessly. A scenario – not uncommon in our daily life – is that selective maintaining and updating information can be achieved concurrently. This is an intriguing example of how our brain balances stability and flexibility, when organising its knowledge. A possibility – one may draw upon to understand this capacity – is that working memory is represented as beliefs, or its probability densities, which are updated in a context-sensitive manner. This means one could treat working memory in the same way as perception – i.e., memories are based on inferring the cause of sensations, except that the time scale ranges from an instant to prolonged anticipation. In this setting, working memory is susceptible to prior information encoded in the brain’s model of its world. This thesis aimed to establish an interpretation of working memory processing that rests on the (generalised) predictive coding framework, or hierarchical inference in the brain. Specifically, the main question it asked was how anticipation modulates working memory updating (or maintenance). A novel working memory updating task was designed in this regard. Blood-oxygen-level dependent (BOLD) imaging, machine learning, and dynamic causal modelling (DCM) were applied to identify the neural correlates of anticipation and the violation of anticipation, as well as the causal structure generating these neural correlates. Anticipation induced neural activity in the dopaminergic midbrain and the striatum. Whereas, the fronto-parietal and cingulo-operculum network were implicated when an anticipated update was omitted, and the midbrain, occipital cortices, and cerebellum when an update was unexpected. DCM revealed that anticipation is a modulation of backward connections, whilst the associated surprise is mediated by forward and local recurrent modulations. Two mutually antagonistic pathways were differentially modulated under anticipatory flexibility and stability, respectively. The overall results indicate that working memory may as well follow the cortical message-passing scheme that enables hierarchical inference

Representation of statistical sound properties in human auditory cortex

The work carried out in this doctoral thesis investigated the representation of statistical sound properties in human auditory cortex. It addressed four key aspects in auditory neuroscience: the representation of different analysis time windows in auditory cortex; mechanisms for the analysis and segregation of auditory objects; information-theoretic constraints on pitch sequence processing; and the analysis of local and global pitch patterns. The majority of the studies employed a parametric design in which the statistical properties of a single acoustic parameter were altered along a continuum, while keeping other sound properties fixed. The thesis is divided into four parts. Part I (Chapter 1) examines principles of anatomical and functional organisation that constrain the problems addressed. Part II (Chapter 2) introduces approaches to digital stimulus design, principles of functional magnetic resonance imaging (fMRI), and the analysis of fMRI data. Part III (Chapters 3-6) reports five experimental studies. Study 1 controlled the spectrotemporal correlation in complex acoustic spectra and showed that activity in auditory association cortex increases as a function of spectrotemporal correlation. Study 2 demonstrated a functional hierarchy of the representation of auditory object boundaries and object salience. Studies 3 and 4 investigated cortical mechanisms for encoding entropy in pitch sequences and showed that the planum temporale acts as a computational hub, requiring more computational resources for sequences with high entropy than for those with high redundancy. Study 5 provided evidence for a hierarchical organisation of local and global pitch pattern processing in neurologically normal participants. Finally, Part IV (Chapter 7) concludes with a general discussion of the results and future perspectives

Attention Restraint, Working Memory Capacity, and Mind Wandering: Do Emotional Valence or Intentionality Matter?

Attention restraint appears to mediate the relationship between working memory capacity (WMC) and mind wandering (Kane et al., 2016). Prior work has identifed two dimensions of mind wandering—emotional valence and intentionality. However, less is known about how WMC and attention restraint correlate with these dimensions. Te current study examined the relationship between WMC, attention restraint, and mind wandering by emotional valence and intentionality. A confrmatory factor analysis demonstrated that WMC and attention restraint were strongly correlated, but only attention restraint was related to overall mind wandering, consistent with prior fndings. However, when examining the emotional valence of mind wandering, attention restraint and WMC were related to negatively and positively valenced, but not neutral, mind wandering. Attention restraint was also related to intentional but not unintentional mind wandering. Tese results suggest that WMC and attention restraint predict some, but not all, types of mind wandering

Do informal caregivers of people with dementia mirror the cognitive deficits of their demented patients?:A pilot study

Recent research suggests that informal caregivers of people with dementia (ICs) experience more cognitive deficits than noncaregivers. The reason for this is not yet clear. Objective: to test the hypothesis that ICs ‘mirror' the cognitive deficits of the demented people they care for. Participants and methods: 105 adult ICs were asked to complete three neuropsychological tests: letter fluency, category fluency, and the logical memory test from the WMS-III. The ICs were grouped according to the diagnosis of their demented patients. One-sample ttests were conducted to investigate if the standardized mean scores (t-scores) of the ICs were different from normative data. A Bonferroni correction was used to correct for multiple comparisons. Results: 82 ICs cared for people with Alzheimer's dementia and 23 ICs cared for people with vascular dementia. Mean letter fluency score of the ICs of people with Alzheimer's dementia was significantly lower than the normative mean letter fluency score, p = .002. The other tests yielded no significant results. Conclusion: our data shows that ICs of Alzheimer patients have cognitive deficits on the letter fluency test. This test primarily measures executive functioning and it has been found to be sensitive to mild cognitive impairment in recent research. Our data tentatively suggests that ICs who care for Alzheimer patients also show signs of cognitive impairment but that it is too early to tell if this is cause for concern or not