Autonomic State Management for Optimistic Simulation Platforms

We present the design and implementation of an autonomic state manager (ASM) tailored for integration within optimistic parallel discrete event simulation (PDES) environments based on the C programming language and the executable and linkable format (ELF), and developed for execution on x8664 architectures. With ASM, the state of any logical process (LP), namely the individual (concurrent) simulation unit being part of the simulation model, is allowed to be scattered on dynamically allocated memory chunks managed via standard API (e.g., malloc/free). Also, the application programmer is not required to provide any serialization/deserialization module in order to take a checkpoint of the LP state, or to restore it in case a causality error occurs during the optimistic run, or to provide indications on which portions of the state are updated by event processing, so to allow incremental checkpointing. All these tasks are handled by ASM in a fully transparent manner via (A) runtime identification (with chunk-level granularity) of the memory map associated with the LP state, and (B) runtime tracking of the memory updates occurring within chunks belonging to the dynamic memory map. The co-existence of the incremental and non-incremental log/restore modes is achieved via dual versions of the same application code, transparently generated by ASM via compile/link time facilities. Also, the dynamic selection of the best suited log/restore mode is actuated by ASM on the basis of an innovative modeling/optimization approach which takes into account stability of each operating mode with respect to variations of the model/environmental execution parameters

Master/worker parallel discrete event simulation

The execution of parallel discrete event simulation across metacomputing infrastructures is examined. A master/worker architecture for parallel discrete event simulation is proposed providing robust executions under a dynamic set of services with system-level support for fault tolerance, semi-automated client-directed load balancing, portability across heterogeneous machines, and the ability to run codes on idle or time-sharing clients without significant interaction by users. Research questions and challenges associated with issues and limitations with the work distribution paradigm, targeted computational domain, performance metrics, and the intended class of applications to be used in this context are analyzed and discussed. A portable web services approach to master/worker parallel discrete event simulation is proposed and evaluated with subsequent optimizations to increase the efficiency of large-scale simulation execution through distributed master service design and intrinsic overhead reduction. New techniques for addressing challenges associated with optimistic parallel discrete event simulation across metacomputing such as rollbacks and message unsending with an inherently different computation paradigm utilizing master services and time windows are proposed and examined. Results indicate that a master/worker approach utilizing loosely coupled resources is a viable means for high throughput parallel discrete event simulation by enhancing existing computational capacity or providing alternate execution capability for less time-critical codes.Ph.D.Committee Chair: Fujimoto, Richard; Committee Member: Bader, David; Committee Member: Perumalla, Kalyan; Committee Member: Riley, George; Committee Member: Vuduc, Richar

Portable Checkpointing for Parallel Applications

High Performance Computing (HPC) systems represent the peak of modern computational capability. As ever-increasing demands for computational power have fuelled the demand for ever-larger computing systems, modern HPC systems have grown to incorporate hundreds, thousands or as many as 130,000 processors. At these scales, the huge number of individual components in a single system makes the probability that a single component will fail quite high, with today's large HPC systems featuring mean times between failures on the order of hours or a few days. As many modern computational tasks require days or months to complete, fault tolerance becomes critical to HPC system design. The past three decades have seen significant amounts of research on parallel system fault tolerance. However, as most of it has been either theoretical or has focused on low-level solutions that are embedded into a particular operating system or type of hardware, this work has had little impact on real HPC systems. This thesis attempts to address this lack of impact by describing a high-level approach for implementing checkpoint/restart functionality that decouples the fault tolerance solution from the details of the operating system, system libraries and the hardware and instead connects it to the APIs implemented by the above components. The resulting solution enables applications that use these APIs to become self-checkpointing and self-restarting regardless of the the software/hardware platform that may implement the APIs. The particular focus of this thesis is on the problem of checkpoint/restart of parallel applications. It presents two theoretical checkpointing protocols, one for the message passing communication model and one for the shared memory model. The former is the first protocol to be compatible with application-level checkpointing of individual processes, while the latter is the first protocol that is compatible with arbitrary shared memory models, APIs, implementations and consistency protocols. These checkpointing protocols are used to implement checkpointing systems for applications that use the MPI and OpenMP parallel APIs, respectively, and are first in providing checkpoint/restart to arbitrary implementations of these popular APIs. Both checkpointing systems are extensively evaluated on multiple software/hardware platforms and are shown to feature low overheads

Parallel simulation techniques for telecommunication network modelling

In this thesis, we consider the application of parallel simulation to the performance modelling of telecommunication networks. A largely automated approach was first explored using a parallelizing compiler to speed up the simulation of simple models of circuit-switched networks. This yielded reasonable results for relatively little effort compared with other approaches. However, more complex simulation models of packet- and cell-based telecommunication networks, requiring the use of discrete event techniques, need an alternative approach. A critical review of parallel discrete event simulation indicated that a distributed model components approach using conservative or optimistic synchronization would be worth exploring. Experiments were therefore conducted using simulation models of queuing networks and Asynchronous Transfer Mode (ATM) networks to explore the potential speed-up possible using this approach. Specifically, it is shown that these techniques can be used successfully to speed-up the execution of useful telecommunication network simulations. A detailed investigation has demonstrated that conservative synchronization performs very well for applications with good look ahead properties and sufficient message traffic density and, given such properties, will significantly outperform optimistic synchronization. Optimistic synchronization, however, gives reasonable speed-up for models with a wider range of such properties and can be optimized for speed-up and memory usage at run time. Thus, it is confirmed as being more generally applicable particularly as model development is somewhat easier than for conservative synchronization. This has to be balanced against the more difficult task of developing and debugging an optimistic synchronization kernel and the application models

Keeping checkpoint/restart viable for exascale systems

Next-generation exascale systems, those capable of performing a quintillion operations per second, are expected to be delivered in the next 8-10 years. These systems, which will be 1,000 times faster than current systems, will be of unprecedented scale. As these systems continue to grow in size, faults will become increasingly common, even over the course of small calculations. Therefore, issues such as fault tolerance and reliability will limit application scalability. Current techniques to ensure progress across faults like checkpoint/restart, the dominant fault tolerance mechanism for the last 25 years, are increasingly problematic at the scales of future systems due to their excessive overheads. In this work, we evaluate a number of techniques to decrease the overhead of checkpoint/restart and keep this method viable for future exascale systems. More specifically, this work evaluates state-machine replication to dramatically increase the checkpoint interval (the time between successive checkpoints) and hash-based, probabilistic incremental checkpointing using graphics processing units to decrease the checkpoint commit time (the time to save one checkpoint). Using a combination of empirical analysis, modeling, and simulation, we study the costs and benefits of these approaches on a wide range of parameters. These results, which cover of number of high-performance computing capability workloads, different failure distributions, hardware mean time to failures, and I/O bandwidths, show the potential benefits of these techniques for meeting the reliability demands of future exascale platforms

A novel parallelization technique for DEVS simulation of continuous and hybrid systems.

In this paper, we introduce a novel parallelization technique for Discrete Event System Specification (DEVS) simulation of continuous and hybrid systems. Here, like in most parallel discrete event simulation methodologies, the models are first split into several sub-models which are than concurrently simulated on different processors. In order to avoid the cost of the global synchronization of all processes, the simulation time of each sub-model is locally synchronized in a real-time fashion with a scaled version of physical time, which implicitly synchronizes all sub-models. The new methodology, coined Scaled Real-Time Synchronization (SRTS), does not ensure a perfect synchronization in its implementation. However, under certain conditions, the synchronization error introduced only provokes bounded numerical errors in the simulation results. SRTS uses the same physical time-scaling parameter throughout the entire simulation. We also developed an adaptive version of the methodology (Adaptive-SRTS) where this parameter automatically evolves during the simulation according to the workload. We implemented the SRTS and Adaptive-SRTS techniques in PowerDEVS , a DEVS simulation tool, under a real-time operating system called the Real-Time Application Interface (RTAI) . We tested their performance by simulating three large-scale models, obtaining in all cases a considerable speedup.Fil: Bergero, Federico. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro Internacional Franco Argentino de Ciencias de la Información y de Sistemas. Universidad Nacional de Rosario. Centro Internacional Franco Argentino de Ciencias de la Información y de Sistemas; ArgentinaFil: Kofman, Ernesto Javier. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro Internacional Franco Argentino de Ciencias de la Información y de Sistemas. Universidad Nacional de Rosario. Centro Internacional Franco Argentino de Ciencias de la Información y de Sistemas; ArgentinaFil: Cellier, François. Swiss Federal Institute Of Technology Zurich. Departament Informatik. Modeling And Simulation Research Group; Suiz

A new approach to reversible computing with applications to speculative parallel simulation

In this thesis, we propose an innovative approach to reversible computing that shifts the focus from the operations to the memory outcome of a generic program. This choice allows us to overcome some typical challenges of "plain" reversible computing. Our methodology is to instrument a generic application with the help of an instrumentation tool, namely Hijacker, which we have redesigned and developed for the purpose. Through compile-time instrumentation, we enhance the program's code to keep track of the memory trace it produces until the end. Regardless of the complexity behind the generation of each computational step of the program, we can build inverse machine instructions just by inspecting the instruction that is attempting to write some value to memory. Therefore from this information, we craft an ad-hoc instruction that conveys this old value and the knowledge of where to replace it. This instruction will become part of a more comprehensive structure, namely the reverse window. Through this structure, we have sufficient information to cancel all the updates done by the generic program during its execution. In this writing, we will discuss the structure of the reverse window, as the building block for the whole reversing framework we designed and finally realized. Albeit we settle our solution in the specific context of the parallel discrete event simulation (PDES) adopting the Time Warp synchronization protocol, this framework paves the way for further general-purpose development and employment. We also present two additional innovative contributions coming from our innovative reversibility approach, both of them still embrace traditional state saving-based rollback strategy. The first contribution aims to harness the advantages of both the possible approaches. We implement the rollback operation combining state saving together with our reversible support through a mathematical model. This model enables the system to choose in autonomicity the best rollback strategy, by the mutable runtime dynamics of programs. The second contribution explores an orthogonal direction, still related to reversible computing aspects. In particular, we will address the problem of reversing shared libraries. Indeed, leading from their nature, shared objects are visible to the whole system and so does every possible external modification of their code. As a consequence, it is not possible to instrument them without affecting other unaware applications. We propose a different method to deal with the instrumentation of shared objects. All our innovative proposals have been assessed using the last generation of the open source ROOT-Sim PDES platform, where we integrated our solutions. ROOT-Sim is a C-based package implementing a general purpose simulation environment based on the Time Warp synchronization protocol

Techniques for Transparent Parallelization of Discrete Event Simulation Models

Simulation is a powerful technique to represent the evolution of real-world phenomena or systems over time. It has been extensively used in different research fields (from medicine to biology, to economy, and to disaster rescue) to study the behaviour of complex systems during their evolution (symbiotic simulation) or before their actual realization (what-if analysis). A traditional way to achieve high performance simulations is the employment of Parallel Discrete Event Simulation (PDES) techniques, which are based on the partitioning of the simulation model into Logical Processes (LPs) that can execute events in parallel on different CPUs and/or different CPU cores, and rely on synchronization mechanisms to achieve causally consistent execution of simulation events. As it is well recognized, the optimistic synchronization approach, namely the Time Warp protocol, which is based on rollback for recovering possible timestamp-order violations due to the absence of block-until-safe policies for event processing, is likely to favour speedup in general application/ architectural contexts. However, the optimistic PDES paradigm implicitly relies on a programming model that shifts from traditional sequential-style programming, given that there is no notion of global address space (fully accessible while processing events at any LP). Furthermore, there is the underlying assumption that the code associated with event handlers cannot execute unrecoverable operations given their speculative processing nature. Nevertheless, even though no unrecoverable action is ever executed by event handlers, a means to actually undo the action if requested needs to be devised and implemented within the software stack. On the other hand, sequential-style programming is an easy paradigm for the development of simulation code, given that it does not require the programmer to reason about memory partitioning (and therefore message passing) and speculative (concurrent) processing of the application. In this thesis, we present methodological and technical innovations which will show how it is possible, by developing innovative runtime mechanisms, to allow a programmer to implement its simulation model in a fully sequential way, and have the underlying simulation framework to execute it in parallel according to speculative processing techniques. Some of the approaches we provide show applicability in either shared- or distributed-memory systems, while others will be specifically tailored to multi/many-core architectures. We will clearly show, during the development of these supports, what is the effect on performance of these solutions, which will nevertheless be negligible, allowing a fruitful exploitation of the available computing power. In the end, we will highlight which are the clear benefits on the programming model tha

Architectural Exploration of Data Recomputation for Improving Energy Efficiency

University of Minnesota Ph.D. dissertation. July 2017. Major: Electrical/Computer Engineering. Advisor: Ulya Karpuzcu. 1 computer file (PDF); viii, 99 pages.There are two fundamental challenges for modern computer system design. The first one is accommodating the increasing demand for performance in a tight power budget. The second one is ensuring correct progress despite the increasing possibility of faults that may occur in the system. To address the first challenge, it is essential to track where the power goes. The energy consumption of data orchestration (i.e., storage, movement, communication) dominates the energy consumption of actual data production, i.e., computation. Oftentimes, recomputing data becomes more energy efficient than storing and retrieving pre-computed data by minimizing the prevalent power and performance overhead of data storage, retrieval, and communication. At the same time, recomputation can reduce the demand for communication bandwidth and shrink the memory footprint. In the first half of the dissertation, the potential of data recomputation in improving energy efficiency is quantified and a practical recomputation framework is introduced to trade computation for communication. To address the second challenge, it is needed to provide scalable checkpointing and recovery mechanisms. The traditional method to recover from a fault is to periodically checkpoint the state of the machine. Periodic checkpointing of the machine state makes rollback and restart of execution from a safe state possible upon detection of a fault. The energy overhead of checkpointing, however, as incurred by storage and communication of the machine state grows with the frequency of checkpointing. Amortizing this overhead becomes especially challenging, considering the growth of expected error rates as an artifact of contemporary technology scaling. Recomputation of data (which otherwise would be read from a checkpoint) can reduce both the frequency of checkpointing, the size of the checkpoints and thereby mitigate checkpointing overhead. In the second half, quantitative characterization of recomputation-enabled checkpointing (based on recomputation framework) is provided

Study of fault-tolerant software technology

Presented is an overview of the current state of the art of fault-tolerant software and an analysis of quantitative techniques and models developed to assess its impact. It examines research efforts as well as experience gained from commercial application of these techniques. The paper also addresses the computer architecture and design implications on hardware, operating systems and programming languages (including Ada) of using fault-tolerant software in real-time aerospace applications. It concludes that fault-tolerant software has progressed beyond the pure research state. The paper also finds that, although not perfectly matched, newer architectural and language capabilities provide many of the notations and functions needed to effectively and efficiently implement software fault-tolerance