Topology-aware GPU scheduling for learning workloads in cloud environments

Recent advances in hardware, such as systems with multiple GPUs and their availability in the cloud, are enabling deep learning in various domains including health care, autonomous vehicles, and Internet of Things. Multi-GPU systems exhibit complex connectivity among GPUs and between GPUs and CPUs. Workload schedulers must consider hardware topology and workload communication requirements in order to allocate CPU and GPU resources for optimal execution time and improved utilization in shared cloud environments. This paper presents a new topology-aware workload placement strategy to schedule deep learning jobs on multi-GPU systems. The placement strategy is evaluated with a prototype on a Power8 machine with Tesla P100 cards, showing speedups of up to ≈1.30x compared to state-of-the-art strategies; the proposed algorithm achieves this result by allocating GPUs that satisfy workload requirements while preventing interference. Additionally, a large-scale simulation shows that the proposed strategy provides higher resource utilization and performance in cloud systems.This project is supported by the IBM/BSC Technology Center for Supercomputing collaboration agreement. It has also received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (grant agreement No 639595). It is also partially supported by the Ministry of Economy of Spain under contract TIN2015-65316-P and Generalitat de Catalunya under contract 2014SGR1051, by the ICREA Academia program, and by the BSC-CNS Severo Ochoa program (SEV-2015-0493). We thank our IBM Research colleagues Alaa Youssef and Asser Tantawi for the valuable discussions. We also thank SC17 committee member Blair Bethwaite of Monash University for his constructive feedback on the earlier drafts of this paper.Peer ReviewedPostprint (published version

Detection of Myofascial Trigger Points With Ultrasound Imaging and Machine Learning

Myofascial Pain Syndrome (MPS) is a common chronic muscle pain disorder that affects a large portion of the global population, seen in 85-93% of patients in specialty pain clinics [10]. MPS is characterized by hard, palpable nodules caused by a stiffened taut band of muscle fibers. These nodules are referred to as Myofascial Trigger Points (MTrPs) and can be classified by two states: active MTrPs (A-MTrPs) and latent MtrPs (L-MTrPs). Treatment for MPS involves massage therapy, acupuncture, and injections or painkillers. Given the subjectivity of patient pain quantification, MPS can often lead to mistreatment or drug misuse. A deterministic way to quantify the pain is needed for better diagnosis and treatment. Various medical imaging technologies have been used to try to find quantifiable and measurable biomarkers of MTrPs. Ultrasound imaging, with it’s accessibility and variety of modalities, has shown significant findings in identifying MTrPs. Elastography ultrasound, which is used for measuring stiffness in soft tissues, has shown that MTrPs tend to be stiffer than normal muscle tissue. Doppler ultrasound has shown that bloodflow velocities differ significantly in areas surrounding MTrPs. MTrPs have been identified in standard B-mode grayscale ultrasound, but have varying conclusions with some studies identifying them as dark hypoechoic blobs and other studies showing them as bright hyperechoic blobs. Despite these discoveries, there is a high variance among results with no correlations to severity or pain. As a step towards quantifying the pain associated with MTrPs, this work aims to introduce a machine learning approach using image processing with texture recognition to detect MTrPs in Bmode ultrasound. A texture recognition algorithm called Gray Level Co-Occurrence Matrix (GLCM) is used to extract texture features from the B-mode ultrasound image. Feature maps are generated to emphasize these texture features in an image format in anticipation that a deep convolutional neural network will be able to correlate the features with the presence of a MTrP. The GLCM feature maps are compared to the elastography ultrasound to determine any correlations with muscle stiffness and then evaluated in the presence of MTrPs. The feature map generation is accelerated with a GPU-based implementation for the goal of real-time processing and inference of the machine learning model. Finally, two deep learning models are implemented to detect MTrPs comparing the effect of using GLCM feature maps of B-mode ultrasound to emphasize texture features for machine learning model inputs

Single-board device individual authentication based on hardware performance and autoencoder transformer models

The proliferation of the Internet of Things (IoT) has led to the emergence of crowdsensing applications, where a multitude of interconnected devices collaboratively collect and analyze data. Ensuring the authenticity and integrity of the data collected by these devices is crucial for reliable decision-making and maintaining trust in the system. Traditional authentication methods are often vulnerable to attacks or can be easily duplicated, posing challenges to securing crowdsensing applications. Besides, current solutions leveraging device behavior are mostly focused on device identification, which is a simpler task than authentication. To address these issues, an individual IoT device authentication framework based on hardware behavior fingerprinting and Transformer autoencoders is proposed in this work. To support the design, a threat model details the security problems faced when performing hardware-based authentication in IoT. This solution leverages the inherent imperfections and variations in IoT device hardware to differentiate between devices with identical specifications. By monitoring and analyzing the behavior of key hardware components, such as the CPU, GPU, RAM, and Storage on devices, unique fingerprints for each device are created. The performance samples are considered as time series data and used to train outlier detection transformer models, one per device and aiming to model its normal data distribution. Then, the framework is validated within a spectrum crowdsensing system leveraging Raspberry Pi devices. After a pool of experiments, the model from each device is able to individually authenticate it between the 45 devices employed for validation. An average True Positive Rate (TPR) of 0.74±0.13 and an average maximum False Positive Rate (FPR) of 0.06±0.09 demonstrate the effectiveness of this approach in enhancing authentication, security, and trust in crowdsensing applications

Tricking AI chips into simulating the human brain:A detailed performance analysis

In recent years, significant strides in Artificial Intelligence (AI) have led to various practical applications, primarily centered around training and deployment of deep neural networks (DNNs). These applications, however, require considerable computational resources, predominantly reliant on modern Graphics-Processing Units (GPUs). Yet, the quest for larger and faster DNNs has spurred the creation of specialized AI chips and efficient Machine-Learning (ML) software tools like TensorFlow and PyTorch have been developed for striking a balance between usability and performance. Simultaneously, the field of computational neuroscience shares a similar quest for increased computational power to simulate more extensive and detailed brain models, while also keeping usability high. Although GPUs have also entered this field, programming complexity remains high, resulting in cumbersome simulations. Inspired by AI progress, we introduce a workflow for easily accelerating brain simulations using TensorFlow and evaluate the performance of various, cutting-edge AI chips – including the Graphcore Intelligence-Processing Unit (IPU), GroqChip, Nvidia GPU with Tensor Cores, and Google Tensor-Processing Unit (TPU) – when simulating a biologically detailed as well as simpler brain models. Our model simulations explore the architectural tradeoffs of a modern-day CPU and these four AI platforms by varying computational density, memory requirements and floating-point numerical accuracy. Results show that the GroqChip achieves the best performance for small networks, yet is unable to simulate large-scale networks. At the scale of mammalian brains, the GPU, IPU and TPU achieve speedups ranging from 29x to 1,208x times over CPU runtimes. Remarkably, the TPU sets a new record for the largest, real-time simulation of the inferior-olivary nucleus in the brain. Reduced-accuracy floating-point implementations make some simulation results unreliable for brain research, notably for the GroqChip. Consequently, this work underscores the potential of ML libraries for accelerating brain simulations as well as the critical role of AI-chip numerical accuracy for biophysically realistic brain models.</p

Single-board Device Individual Authentication based on Hardware Performance and Autoencoder Transformer Models

The proliferation of the Internet of Things (IoT) has led to the emergence of crowdsensing applications, where a multitude of interconnected devices collaboratively collect and analyze data. Ensuring the authenticity and integrity of the data collected by these devices is crucial for reliable decision-making and maintaining trust in the system. Traditional authentication methods are often vulnerable to attacks or can be easily duplicated, posing challenges to securing crowdsensing applications. Besides, current solutions leveraging device behavior are mostly focused on device identification, which is a simpler task than authentication. To address these issues, an individual IoT device authentication framework based on hardware behavior fingerprinting and Transformer autoencoders is proposed in this work. This solution leverages the inherent imperfections and variations in IoT device hardware to differentiate between devices with identical specifications. By monitoring and analyzing the behavior of key hardware components, such as the CPU, GPU, RAM, and Storage on devices, unique fingerprints for each device are created. The performance samples are considered as time series data and used to train outlier detection transformer models, one per device and aiming to model its normal data distribution. Then, the framework is validated within a spectrum crowdsensing system leveraging Raspberry Pi devices. After a pool of experiments, the model from each device is able to individually authenticate it between the 45 devices employed for validation. An average True Positive Rate (TPR) of 0.74+-0.13 and an average maximum False Positive Rate (FPR) of 0.06+-0.09 demonstrate the effectiveness of this approach in enhancing authentication, security, and trust in crowdsensing applications

A general guide to applying machine learning to computer architecture

The resurgence of machine learning since the late 1990s has been enabled by significant advances in computing performance and the growth of big data. The ability of these algorithms to detect complex patterns in data which are extremely difficult to achieve manually, helps to produce effective predictive models. Whilst computer architects have been accelerating the performance of machine learning algorithms with GPUs and custom hardware, there have been few implementations leveraging these algorithms to improve the computer system performance. The work that has been conducted, however, has produced considerably promising results. The purpose of this paper is to serve as a foundational base and guide to future computer architecture research seeking to make use of machine learning models for improving system efficiency. We describe a method that highlights when, why, and how to utilize machine learning models for improving system performance and provide a relevant example showcasing the effectiveness of applying machine learning in computer architecture. We describe a process of data generation every execution quantum and parameter engineering. This is followed by a survey of a set of popular machine learning models. We discuss their strengths and weaknesses and provide an evaluation of implementations for the purpose of creating a workload performance predictor for different core types in an x86 processor. The predictions can then be exploited by a scheduler for heterogeneous processors to improve the system throughput. The algorithms of focus are stochastic gradient descent based linear regression, decision trees, random forests, artificial neural networks, and k-nearest neighbors.This work has been supported by the European Research Council (ERC) Advanced Grant RoMoL (Grant Agreemnt 321253) and by the Spanish Ministry of Science and Innovation (contract TIN 2015-65316P).Peer ReviewedPostprint (published version

LEGaTO: first steps towards energy-efficient toolset for heterogeneous computing

LEGaTO is a three-year EU H2020 project which started in December 2017. The LEGaTO project will leverage task-based programming models to provide a software ecosystem for Made-in-Europe heterogeneous hardware composed of CPUs, GPUs, FPGAs and dataflow engines. The aim is to attain one order of magnitude energy savings from the edge to the converged cloud/HPC.Peer ReviewedPostprint (author's final draft

PocketNet: A Smaller Neural Network for Medical Image Analysis

Medical imaging deep learning models are often large and complex, requiring specialized hardware to train and evaluate these models. To address such issues, we propose the PocketNet paradigm to reduce the size of deep learning models by throttling the growth of the number of channels in convolutional neural networks. We demonstrate that, for a range of segmentation and classification tasks, PocketNet architectures produce results comparable to that of conventional neural networks while reducing the number of parameters by multiple orders of magnitude, using up to 90% less GPU memory, and speeding up training times by up to 40%, thereby allowing such models to be trained and deployed in resource-constrained settings

Medical data processing and analysis for remote health and activities monitoring

Recent developments in sensor technology, wearable computing, Internet of Things (IoT), and wireless communication have given rise to research in ubiquitous healthcare and remote monitoring of human\u2019s health and activities. Health monitoring systems involve processing and analysis of data retrieved from smartphones, smart watches, smart bracelets, as well as various sensors and wearable devices. Such systems enable continuous monitoring of patients psychological and health conditions by sensing and transmitting measurements such as heart rate, electrocardiogram, body temperature, respiratory rate, chest sounds, or blood pressure. Pervasive healthcare, as a relevant application domain in this context, aims at revolutionizing the delivery of medical services through a medical assistive environment and facilitates the independent living of patients. In this chapter, we discuss (1) data collection, fusion, ownership and privacy issues; (2) models, technologies and solutions for medical data processing and analysis; (3) big medical data analytics for remote health monitoring; (4) research challenges and opportunities in medical data analytics; (5) examples of case studies and practical solutions