GraphStep: A System Architecture for Sparse-Graph Algorithms

Many important applications are organized around long-lived, irregular sparse graphs (e.g., data and knowledge bases, CAD optimization, numerical problems, simulations). The graph structures are large, and the applications need regular access to a large, data-dependent portion of the graph for each operation (e.g., the algorithm may need to walk the graph, visiting all nodes, or propagate changes through many nodes in the graph). On conventional microprocessors, the graph structures exceed on-chip cache capacities, making main-memory bandwidth and latency the key performance limiters. To avoid this “memory wall,” we introduce a concurrent system architecture for sparse graph algorithms that places graph nodes in small distributed memories paired with specialized graph processing nodes interconnected by a lightweight network. This gives us a scalable way to map these applications so that they can exploit the high-bandwidth and low-latency capabilities of embedded memories (e.g., FPGA Block RAMs). On typical spreading activation queries on the ConceptNet Knowledge Base, a sample application, this translates into an order of magnitude speedup per FPGA compared to a state-of-the-art Pentium processor

The M-Machine Multicomputer

The M-Machine is an experimental multicomputer being developed to test architectural concepts motivated by the constraints of modern semiconductor technology and the demands of programming systems. The M- Machine computing nodes are connected with a 3-D mesh network; each node is a multithreaded processor incorporating 12 function units, on-chip cache, and local memory. The multiple function units are used to exploit both instruction-level and thread-level parallelism. A user accessible message passing system yields fast communication and synchronization between nodes. Rapid access to remote memory is provided transparently to the user with a combination of hardware and software mechanisms. This paper presents the architecture of the M-Machine and describes how its mechanisms maximize both single thread performance and overall system throughput

Anatomy of a message in the Alewife multiprocessor

Shared-memory provides a uniform and attractive mechanism for communication. For efficiency, it is often implemented with a layer of interpretive hardware on top of a message-passing communications network. This interpretive layer is responsible for data location, data movement, and cache coherence. It uses patterns of communication that benefit common programming styles, but which are only heuristics. This suggests that certain styles of communication may benefit from direct access to the underlying communications substrate. The Alewife machine, a shared-memory multiprocessor being built at MIT, provides such an interface. The interface is an integral part of the shared memory implementation and affords direct, user-level access to the network queues, supports an efficient DMA mechanism, and includes fast trap handling for message reception. This paper discusses the design and implementation of the Alewife message-passing interface and addresses the issues and advantages of using such an interface to complement hardware-synthesized shared memory.National Science Foundation (U.S.) (Grant MIP-9012773)United States. Defense Advanced Research Projects Agency (Contract N00014-87-K-0825

A lisp oriented architecture

Thesis (M.S.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 1994.Includes bibliographical references (p. 63-67).by John W.F. McClain.M.S

Coherent network interfaces for fine-grain communication

Using coherence can improve performance by facilitating burst transfers of whole cache blocks and reducing control overheads. This paper describes an attempt to explore network interfaces that use coherence, i.e., coherent network interfaces (CNIs), to improve communication performance. First, it reports on the development and optimization of two mechanisms that CNIs use to communicate with processors. A taxonomy and comparison of four CNIs with a more conventional NI are then presented

Efficient message subsystem design

Thesis (M.S.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 1994.Includes bibliographical references (p. 71-74).by Whay Sing Lee.M.S

Improving the Scalability of High Performance Computer Systems

Improving the performance of future computing systems will be based upon the ability of increasing the scalability of current technology. New paths need to be explored, as operating principles that were applied up to now are becoming irrelevant for upcoming computer architectures. It appears that scaling the number of cores, processors and nodes within an system represents the only feasible alternative to achieve Exascale performance. To accomplish this goal, we propose three novel techniques addressing different layers of computer systems. The Tightly Coupled Cluster technique significantly improves the communication for inter node communication within compute clusters. By improving the latency by an order of magnitude over existing solutions the cost of communication is considerably reduced. This enables to exploit fine grain parallelism within applications, thereby, extending the scalability considerably. The mechanism virtually moves the network interconnect into the processor, bypassing the latency of the I/O interface and rendering protocol conversions unnecessary. The technique is implemented entirely through firmware and kernel layer software utilizing off-the-shelf AMD processors. We present a proof-of-concept implementation and real world benchmarks to demonstrate the superior performance of our technique. In particular, our approach achieves a software-to-software communication latency of 240 ns between two remote compute nodes. The second part of the dissertation introduces a new framework for scalable Networks-on-Chip. A novel rapid prototyping methodology is proposed, that accelerates the design and implementation substantially. Due to its flexibility and modularity a large application space is covered ranging from Systems-on-chip, to high performance many-core processors. The Network-on-Chip compiler enables to generate complex networks in the form of synthesizable register transfer level code from an abstract design description. Our engine supports different target technologies including Field Programmable Gate Arrays and Application Specific Integrated Circuits. The framework enables to build large designs while minimizing development and verification efforts. Many topologies and routing algorithms are supported by partitioning the tasks into several layers and by the introduction of a protocol agnostic architecture. We provide a thorough evaluation of the design that shows excellent results regarding performance and scalability. The third part of the dissertation addresses the Processor-Memory Interface within computer architectures. The increasing compute power of many-core processors, leads to an equally growing demand for more memory bandwidth and capacity. Current processor designs exhibit physical limitations that restrict the scalability of main memory. To address this issue we propose a memory extension technique that attaches large amounts of DRAM memory to the processor via a low pin count interface using high speed serial transceivers. Our technique transparently integrates the extension memory into the system architecture by providing full cache coherency. Therefore, applications can utilize the memory extension by applying regular shared memory programming techniques. By supporting daisy chained memory extension devices and by introducing the asymmetric probing approach, the proposed mechanism ensures high scalability. We furthermore propose a DMA offloading technique to improve the performance of the processor memory interface. The design has been implemented in a Field Programmable Gate Array based prototype. Driver software and firmware modifications have been developed to bring up the prototype in a Linux based system. We show microbenchmarks that prove the feasibility of our design

Doctor of Philosophy

dissertationHigh-performance supercomputers on the Top500 list are commonly designed around commodity CPUs. Most of the codes executed on these machines are message-passing codes using the message-passing toolkit (MPI). Thus it makes sense to look at these machines from a holistic systems architecture perspective and consider optimizations to commodity processors that make them more efficient in message-passing architectures. Described herein is a new User-Level Notification (ULN) architecture that significantly improves message-passing performance. The architecture integrates a simultaneous multithreaded (SMT) processor with a user-level network interface (NI) that can directly control the execution scheduling of threads on the processor. By allowing the network interface to control the execution of message handling code at the user level, the operating system (OS) related overhead for handling interrupts and user code dispatch related to notifications is eliminated. By using an SMT processor, message handling can be performed in one thread concurrent to user computation in other threads, thus most of the overhead of executing message handlers can be hidden. This dissertation presents measurements showing the OS overheads related to message-passing are significant in modern architectures and describes a new architecture that significantly reduces these overheads. On a communication-intensive real-world application, the ULN architecture provides a 50.9% performance improvement over a more traditional OS-based NIC and a 5.29-31.9% improvement over a best-of-class user-level NIC due to the user-level notifications

Mechanisms for efficient, protected messaging

Thesis (Ph.D.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 1999.Includes bibliographical references (p. 143-149).by Whay Sing Lee.Ph.D

Effective parallel computation on workstation cluster with a user-level communication network

Thesis (M.S.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 1994.Includes bibliographical references (p. 118-119).by James C. Hoe.M.S