MACHINE LEARNING APPLICATIONS TO DATA RECONSTRUCTION IN MARINE BIOGEOCHEMISTRY.

Driven by the increase of greenhouse gas emissions, climate change is causing significant shifts in the Earth's climatic patterns, profoundly affecting our oceans. In recent years, our capacity to monitor and understand the state and variability of the ocean has been significantly enhanced, thanks to improved observational capacity, new data-driven approaches, and advanced computational capabilities. Contemporary marine analyses typically integrate multiple data sources: numerical models, satellite data, autonomous instruments, and ship-based measurements. Temperature, salinity, and several other ocean essential variables, such as oxygen, chlorophyll, and nutrients, are among the most frequently monitored variables. Each of these sources and variables, while providing valuable insights, has distinct limitations in terms of uncertainty, spatial and temporal coverage, and resolution. The application of deep learning offers a promising avenue for addressing challenges in data prediction, notably in data reconstruction and interpolation, thus enhancing our ability to monitor and understand the ocean. This thesis proposes and evaluates the performances of a variety of neural network architectures, examining the intricate relationship between methods, ocean data sources, and challenges. A special focus is given to the biogeochemistry of the Mediterranean Sea. A primary objective is predicting low-sampled biogeochemical variables from high-sampled ones. For this purpose, two distinct deep learning models have been developed, each specifically tailored to the dataset used for training. Addressing this challenge not only boosts our capability to predict biogeochemical variables in the highly heterogeneous Mediterranean Sea region but also allows the increase in the usefulness of observational systems such as the BGC-Argo floats. Additionally, a method is introduced to integrate BGC-Argo float observations with outputs from an existing deterministic marine ecosystem model, refining our ability to interpolate and reconstruct biogeochemical variables in the Mediterranean Sea. As the development of novel neural network methods progresses rapidly, the task of establishing benchmarks for data-driven ocean modeling is far from complete. This work offers insights into various applications, highlighting their strengths and limitations, besides highlighting the importance relationship between methods and datasets.Driven by the increase of greenhouse gas emissions, climate change is causing significant shifts in the Earth's climatic patterns, profoundly affecting our oceans. In recent years, our capacity to monitor and understand the state and variability of the ocean has been significantly enhanced, thanks to improved observational capacity, new data-driven approaches, and advanced computational capabilities. Contemporary marine analyses typically integrate multiple data sources: numerical models, satellite data, autonomous instruments, and ship-based measurements. Temperature, salinity, and several other ocean essential variables, such as oxygen, chlorophyll, and nutrients, are among the most frequently monitored variables. Each of these sources and variables, while providing valuable insights, has distinct limitations in terms of uncertainty, spatial and temporal coverage, and resolution. The application of deep learning offers a promising avenue for addressing challenges in data prediction, notably in data reconstruction and interpolation, thus enhancing our ability to monitor and understand the ocean. This thesis proposes and evaluates the performances of a variety of neural network architectures, examining the intricate relationship between methods, ocean data sources, and challenges. A special focus is given to the biogeochemistry of the Mediterranean Sea. A primary objective is predicting low-sampled biogeochemical variables from high-sampled ones. For this purpose, two distinct deep learning models have been developed, each specifically tailored to the dataset used for training. Addressing this challenge not only boosts our capability to predict biogeochemical variables in the highly heterogeneous Mediterranean Sea region but also allows the increase in the usefulness of observational systems such as the BGC-Argo floats. Additionally, a method is introduced to integrate BGC-Argo float observations with outputs from an existing deterministic marine ecosystem model, refining our ability to interpolate and reconstruct biogeochemical variables in the Mediterranean Sea. As the development of novel neural network methods progresses rapidly, the task of establishing benchmarks for data-driven ocean modeling is far from complete. This work offers insights into various applications, highlighting their strengths and limitations, besides highlighting the importance relationship between methods and datasets

Hydrocarbon quantification using neural networks and deep learning based hyperspectral unmixing

Hydrocarbon (HC) spills are a global issue, which can seriously impact human life and the environment, therefore early identification and remedial measures taken at an early stage are important. Thus, current research efforts aim at remotely quantifying incipient quantities of HC mixed with soils. The increased spectral and spatial resolution of hyperspectral sensors has opened ground-breaking perspectives in many industries including remote inspection of large areas and the environment. The use of subpixel detection algorithms, and in particular the use of the mixture models, has been identified as a future advance that needs to be incorporated in remote sensing. However, there are some challenging tasks since the spectral signatures of the targets of interest may not be immediately available. Moreover, real time processing and analysis is required to support fast decision-making. Progressing in this direction, this thesis pioneers and researches novel methodologies for HC quantification capable of exceeding the limitations of existing systems in terms of reduced cost and processing time with improved accuracy. Therefore the goal of this research is to develop, implement and test different methods for improving HC detection and quantification using spectral unmixing and machine learning. An efficient hybrid switch method employing neural networks and hyperspectral is proposed and investigated. This robust method switches between state of the art hyperspectral unmixing linear and nonlinear models, respectively. This procedure is well suited for the quantification of small quantities of substances within a pixel with high accuracy as the most appropriate model is employed. Central to the proposed approach is a novel method for extracting parameters to characterise the non-linearity of the data. These parameters are fed into a feedforward neural network which decides in a pixel by pixel fashion which model is more suitable. The quantification process is fully automated by applying further classification techniques to the acquired hyperspectral images. A deep learning neural network model is designed for the quantification of HC quantities mixed with soils. A three-term backpropagation algorithm with dropout is proposed to avoid overfitting and reduce the computational complexity of the model. The above methods have been evaluated using classical repository datasets from the literature and a laboratory controlled dataset. For that, an experimental procedure has been designed to produce a labelled dataset. The data was obtained by mixing and homogenizing different soil types with HC substances, respectively and measuring the reflectance with a hyperspectral sensor. Findings from the research study reveal that the two proposed models have high performance, they are suitable for the detection and quantification of HC mixed with soils, and surpass existing methods. Improvements in sensitivity, accuracy, computational time are achieved. Thus, the proposed approaches can be used to detect HC spills at an early stage in order to mitigate significant pollution from the spill areas

Mineral identification using data-mining in hyperspectral infrared imagery

Les applications de l’imagerie infrarouge dans le domaine de la géologie sont principalement des applications hyperspectrales. Elles permettent entre autre l’identification minérale, la cartographie, ainsi que l’estimation de la portée. Le plus souvent, ces acquisitions sont réalisées in-situ soit à l’aide de capteurs aéroportés, soit à l’aide de dispositifs portatifs. La découverte de minéraux indicateurs a permis d’améliorer grandement l’exploration minérale. Ceci est en partie dû à l’utilisation d’instruments portatifs. Dans ce contexte le développement de systèmes automatisés permettrait d’augmenter à la fois la qualité de l’exploration et la précision de la détection des indicateurs. C’est dans ce cadre que s’inscrit le travail mené dans ce doctorat. Le sujet consistait en l’utilisation de méthodes d’apprentissage automatique appliquées à l’analyse (au traitement) d’images hyperspectrales prises dans les longueurs d’onde infrarouge. L’objectif recherché étant l’identification de grains minéraux de petites tailles utilisés comme indicateurs minéral -ogiques. Une application potentielle de cette recherche serait le développement d’un outil logiciel d’assistance pour l’analyse des échantillons lors de l’exploration minérale. Les expériences ont été menées en laboratoire dans la gamme relative à l’infrarouge thermique (Long Wave InfraRed, LWIR) de 7.7m à 11.8 m. Ces essais ont permis de proposer une méthode pour calculer l’annulation du continuum. La méthode utilisée lors de ces essais utilise la factorisation matricielle non négative (NMF). En utlisant une factorisation du premier ordre on peut déduire le rayonnement de pénétration, lequel peut ensuite être comparé et analysé par rapport à d’autres méthodes plus communes. L’analyse des résultats spectraux en comparaison avec plusieurs bibliothèques existantes de données a permis de mettre en évidence la suppression du continuum. Les expérience ayant menés à ce résultat ont été conduites en utilisant une plaque Infragold ainsi qu’un objectif macro LWIR. L’identification automatique de grains de différents matériaux tels que la pyrope, l’olivine et le quartz a commencé. Lors d’une phase de comparaison entre des approches supervisées et non supervisées, cette dernière s’est montrée plus approprié en raison du comportement indépendant par rapport à l’étape d’entraînement. Afin de confirmer la qualité de ces résultats quatre expériences ont été menées. Lors d’une première expérience deux algorithmes ont été évalués pour application de regroupements en utilisant l’approche FCC (False Colour Composite). Cet essai a permis d’observer une vitesse de convergence, jusqu’a vingt fois plus rapide, ainsi qu’une efficacité significativement accrue concernant l’identification en comparaison des résultats de la littérature. Cependant des essais effectués sur des données LWIR ont montré un manque de prédiction de la surface du grain lorsque les grains étaient irréguliers avec présence d’agrégats minéraux. La seconde expérience a consisté, en une analyse quantitaive comparative entre deux bases de données de Ground Truth (GT), nommée rigid-GT et observed-GT (rigide-GT: étiquet manuel de la région, observée-GT:étiquetage manuel les pixels). La précision des résultats était 1.5 fois meilleur lorsque l’on a utlisé la base de données observed-GT que rigid-GT. Pour les deux dernières epxérience, des données venant d’un MEB (Microscope Électronique à Balayage) ainsi que d’un microscopie à fluorescence (XRF) ont été ajoutées. Ces données ont permis d’introduire des informations relatives tant aux agrégats minéraux qu’à la surface des grains. Les résultats ont été comparés par des techniques d’identification automatique des minéraux, utilisant ArcGIS. Cette dernière a montré une performance prometteuse quand à l’identification automatique et à aussi été utilisée pour la GT de validation. Dans l’ensemble, les quatre méthodes de cette thèse représentent des méthodologies bénéfiques pour l’identification des minéraux. Ces méthodes présentent l’avantage d’être non-destructives, relativement précises et d’avoir un faible coût en temps calcul ce qui pourrait les qualifier pour être utilisée dans des conditions de laboratoire ou sur le terrain.The geological applications of hyperspectral infrared imagery mainly consist in mineral identification, mapping, airborne or portable instruments, and core logging. Finding the mineral indicators offer considerable benefits in terms of mineralogy and mineral exploration which usually involves application of portable instrument and core logging. Moreover, faster and more mechanized systems development increases the precision of identifying mineral indicators and avoid any possible mis-classification. Therefore, the objective of this thesis was to create a tool to using hyperspectral infrared imagery and process the data through image analysis and machine learning methods to identify small size mineral grains used as mineral indicators. This system would be applied for different circumstances to provide an assistant for geological analysis and mineralogy exploration. The experiments were conducted in laboratory conditions in the long-wave infrared (7.7μm to 11.8μm - LWIR), with a LWIR-macro lens (to improve spatial resolution), an Infragold plate, and a heating source. The process began with a method to calculate the continuum removal. The approach is the application of Non-negative Matrix Factorization (NMF) to extract Rank-1 NMF and estimate the down-welling radiance and then compare it with other conventional methods. The results indicate successful suppression of the continuum from the spectra and enable the spectra to be compared with spectral libraries. Afterwards, to have an automated system, supervised and unsupervised approaches have been tested for identification of pyrope, olivine and quartz grains. The results indicated that the unsupervised approach was more suitable due to independent behavior against training stage. Once these results obtained, two algorithms were tested to create False Color Composites (FCC) applying a clustering approach. The results of this comparison indicate significant computational efficiency (more than 20 times faster) and promising performance for mineral identification. Finally, the reliability of the automated LWIR hyperspectral infrared mineral identification has been tested and the difficulty for identification of the irregular grain’s surface along with the mineral aggregates has been verified. The results were compared to two different Ground Truth(GT) (i.e. rigid-GT and observed-GT) for quantitative calculation. Observed-GT increased the accuracy up to 1.5 times than rigid-GT. The samples were also examined by Micro X-ray Fluorescence (XRF) and Scanning Electron Microscope (SEM) in order to retrieve information for the mineral aggregates and the grain’s surface (biotite, epidote, goethite, diopside, smithsonite, tourmaline, kyanite, scheelite, pyrope, olivine, and quartz). The results of XRF imagery compared with automatic mineral identification techniques, using ArcGIS, and represented a promising performance for automatic identification and have been used for GT validation. In overall, the four methods (i.e. 1.Continuum removal methods; 2. Classification or clustering methods for mineral identification; 3. Two algorithms for clustering of mineral spectra; 4. Reliability verification) in this thesis represent beneficial methodologies to identify minerals. These methods have the advantages to be a non-destructive, relatively accurate and have low computational complexity that might be used to identify and assess mineral grains in the laboratory conditions or in the field

Sustainable Agriculture and Advances of Remote Sensing (Volume 2)

Agriculture, as the main source of alimentation and the most important economic activity globally, is being affected by the impacts of climate change. To maintain and increase our global food system production, to reduce biodiversity loss and preserve our natural ecosystem, new practices and technologies are required. This book focuses on the latest advances in remote sensing technology and agricultural engineering leading to the sustainable agriculture practices. Earth observation data, in situ and proxy-remote sensing data are the main source of information for monitoring and analyzing agriculture activities. Particular attention is given to earth observation satellites and the Internet of Things for data collection, to multispectral and hyperspectral data analysis using machine learning and deep learning, to WebGIS and the Internet of Things for sharing and publication of the results, among others

Advances in Computational Intelligence Applications in the Mining Industry

This book captures advancements in the applications of computational intelligence (artificial intelligence, machine learning, etc.) to problems in the mineral and mining industries. The papers present the state of the art in four broad categories: mine operations, mine planning, mine safety, and advances in the sciences, primarily in image processing applications. Authors in the book include both researchers and industry practitioners

ICR ANNUAL REPORT 2022 (Volume 29)[All Pages]

This Annual Report covers from 1 January to 31 December 202

Development of Mining Sector Applications for Emerging Remote Sensing and Deep Learning Technologies

This thesis uses neural networks and deep learning to address practical, real-world problems in the mining sector. The main focus is on developing novel applications in the area of object detection from remotely sensed data. This area has many potential mining applications and is an important part of moving towards data driven strategic decision making across the mining sector. The scientific contributions of this research are twofold; firstly, each of the three case studies demonstrate new applications which couple remote sensing and neural network based technologies for improved data driven decision making. Secondly, the thesis presents a framework to guide implementation of these technologies in the mining sector, providing a guide for researchers and professionals undertaking further studies of this type. The first case study builds a fully connected neural network method to locate supporting rock bolts from 3D laser scan data. This method combines input features from the remote sensing and mobile robotics research communities, generating accuracy scores up to 22% higher than those found using either feature set in isolation. The neural network approach also is compared to the widely used random forest classifier and is shown to outperform this classifier on the test datasets. Additionally, the algorithms’ performance is enhanced by adding a confusion class to the training data and by grouping the output predictions using density based spatial clustering. The method is tested on two datasets, gathered using different laser scanners, in different types of underground mines which have different rock bolting patterns. In both cases the method is found to be highly capable of detecting the rock bolts with recall scores of 0.87-0.96. The second case study investigates modern deep learning for LiDAR data. Here, multiple transfer learning strategies and LiDAR data representations are examined for the task of identifying historic mining remains. A transfer learning approach based on a Lunar crater detection model is used, due to the task similarities between both the underlying data structures and the geometries of the objects to be detected. The relationship between dataset resolution and detection accuracy is also examined, with the results showing that the approach is capable of detecting pits and shafts to a high degree of accuracy with precision and recall scores between 0.80-0.92, provided the input data is of sufficient quality and resolution. Alongside resolution, different LiDAR data representations are explored, showing that the precision-recall balance varies depending on the input LiDAR data representation. The third case study creates a deep convolutional neural network model to detect artisanal scale mining from multispectral satellite data. This model is trained from initialisation without transfer learning and demonstrates that accurate multispectral models can be built from a smaller training dataset when appropriate design and data augmentation strategies are adopted. Alongside the deep learning model, novel mosaicing algorithms are developed both to improve cloud cover penetration and to decrease noise in the final prediction maps. When applied to the study area, the results from this model provide valuable information about the expansion, migration and forest encroachment of artisanal scale mining in southwestern Ghana over the last four years. Finally, this thesis presents an implementation framework for these neural network based object detection models, to generalise the findings from this research to new mining sector deep learning tasks. This framework can be used to identify applications which would benefit from neural network approaches; to build the models; and to apply these algorithms in a real world environment. The case study chapters confirm that the neural network models are capable of interpreting remotely sensed data to a high degree of accuracy on real world mining problems, while the framework guides the development of new models to solve a wide range of related challenges

Planetary Science Informatics and Data Analytics Conference : April 24–26, 2018, St. Louis, Missouri

The PSIDA conference provides a forum to discuss approaches, challenges, and applications of informatics and data analytics technologies and capabilities in planetary science.Institutional Support NASA Planetary Data System Geosciences, Lunar and Planetary Institute.Chairs Tom Stein, Washington University, St. Louis, USA, Dan Crichton, Jet Propulsion Laboratory, Pasadena, USA ; Program Committee Alphan Altinok, Jet Propulsion Laboratory, Pasadena, USA … [and 8 others]PARTIAL CONTENTS: ESA Planetary Science Archive Architecture and Data Management--SPICE for ESA Planetary Missions--VESPA: Enlarging the Virtual Observatory to Planetary Science--SeaBIRD: A Flexible and Intuitive Planetary Datamining Infrastructure--Model-Driven Development for PDS4 Software and Services--The Need for a Planetary Spatial Data Clearinghouse--The Relationship Between Planetary Spatial Data Infrastructure and the Planetary Data System--Update on the NASA-USGS Planetary Spatial Data Infrastructure Inter-Agency Agreement--MoonDB - A Data System for Analytical Data of Lunar Samples--Large-Scale Numerical Simulations of Planetary Interiors--Scalable Data Processing with the LROC Processing Pipelines--PACKMAN-Net: A Distributed, Open-Access, and Scalable Network of User-Friendly Space Weather Stations

LIPIcs, Volume 277, GIScience 2023, Complete Volume

LIPIcs, Volume 277, GIScience 2023, Complete Volum

12th International Conference on Geographic Information Science: GIScience 2023, September 12–15, 2023, Leeds, UK

No abstract available