Extracting, Transforming and Archiving Scientific Data

It is becoming common to archive research datasets that are not only large but also numerous. In addition, their corresponding metadata and the software required to analyse or display them need to be archived. Yet the manual curation of research data can be difficult and expensive, particularly in very large digital repositories, hence the importance of models and tools for automating digital curation tasks. The automation of these tasks faces three major challenges: (1) research data and data sources are highly heterogeneous, (2) future research needs are difficult to anticipate, (3) data is hard to index. To address these problems, we propose the Extract, Transform and Archive (ETA) model for managing and mechanizing the curation of research data. Specifically, we propose a scalable strategy for addressing the research-data problem, ranging from the extraction of legacy data to its long-term storage. We review some existing solutions and propose novel avenues of research.Comment: 8 pages, Fourth Workshop on Very Large Digital Libraries, 201

Adapting a general parser to a sublanguage

In this paper, we propose a method to adapt a general parser (Link Parser) to sublanguages, focusing on the parsing of texts in biology. Our main proposal is the use of terminology (identication and analysis of terms) in order to reduce the complexity of the text to be parsed. Several other strategies are explored and finally combined among which text normalization, lexicon and morpho-guessing module extensions and grammar rules adaptation. We compare the parsing results before and after these adaptations

Applications of Machine Learning to Threat Intelligence, Intrusion Detection and Malware

Artificial Intelligence (AI) and Machine Learning (ML) are emerging technologies with applications to many fields. This paper is a survey of use cases of ML for threat intelligence, intrusion detection, and malware analysis and detection. Threat intelligence, especially attack attribution, can benefit from the use of ML classification. False positives from rule-based intrusion detection systems can be reduced with the use of ML models. Malware analysis and classification can be made easier by developing ML frameworks to distill similarities between the malicious programs. Adversarial machine learning will also be discussed, because while ML can be used to solve problems or reduce analyst workload, it also introduces new attack surfaces

A unified view of data-intensive flows in business intelligence systems : a survey

Data-intensive flows are central processes in today’s business intelligence (BI) systems, deploying different technologies to deliver data, from a multitude of data sources, in user-preferred and analysis-ready formats. To meet complex requirements of next generation BI systems, we often need an effective combination of the traditionally batched extract-transform-load (ETL) processes that populate a data warehouse (DW) from integrated data sources, and more real-time and operational data flows that integrate source data at runtime. Both academia and industry thus must have a clear understanding of the foundations of data-intensive flows and the challenges of moving towards next generation BI environments. In this paper we present a survey of today’s research on data-intensive flows and the related fundamental fields of database theory. The study is based on a proposed set of dimensions describing the important challenges of data-intensive flows in the next generation BI setting. As a result of this survey, we envision an architecture of a system for managing the lifecycle of data-intensive flows. The results further provide a comprehensive understanding of data-intensive flows, recognizing challenges that still are to be addressed, and how the current solutions can be applied for addressing these challenges.Peer ReviewedPostprint (author's final draft

Towards a Cloud-Based Service for Maintaining and Analyzing Data About Scientific Events

We propose the new cloud-based service OpenResearch for managing and analyzing data about scientific events such as conferences and workshops in a persistent and reliable way. This includes data about scientific articles, participants, acceptance rates, submission numbers, impact values as well as organizational details such as program committees, chairs, fees and sponsors. OpenResearch is a centralized repository for scientific events and supports researchers in collecting, organizing, sharing and disseminating information about scientific events in a structured way. An additional feature currently under development is the possibility to archive web pages along with the extracted semantic data in order to lift the burden of maintaining new and old conference web sites from public research institutions. However, the main advantage is that this cloud-based repository enables a comprehensive analysis of conference data. Based on extracted semantic data, it is possible to determine quality estimations, scientific communities, research trends as well the development of acceptance rates, fees, and number of participants in a continuous way complemented by projections into the future. Furthermore, data about research articles can be systematically explored using a content-based analysis as well as citation linkage. All data maintained in this crowd-sourcing platform is made freely available through an open SPARQL endpoint, which allows for analytical queries in a flexible and user-defined way.Comment: A completed version of this paper had been accepted in SAVE-SD workshop 2017 at WWW conferenc

Integrating e-commerce standards and initiatives in a multi-layered ontology

The proliferation of different standards and joint initiatives for the classification of products and services (UNSPSC, e-cl@ss, RosettaNet, NAICS, SCTG, etc.) reveals that B2B markets have not reached a consensus on the coding systems, on the level of detail of their descriptions, on their granularity, etc. This paper shows how these standards and initiatives, which are built to cover different needs and functionalities, can be integrated in an ontology using a common multi-layered knowledge architecture. This multi-layered ontology will provide a shared understanding of the domain for applications of e-commerce, allowing the information sharing between heterogeneous systems. We will present a method for designing ontologies from these information sources by automatically transforming, integrating and enriching the existing vocabularies with the WebODE platform. As an illustration, we show an example on the computer domain, presenting the relationships between UNSPSC, e-cl@ss, RosettaNet and an electronic catalogue from an e-commerce platform

Automating Content Extraction of HTML Documents

Web pages often contain clutter (such as unnecessary images and extraneous links) around the body of an article that distracts a user from actual content. Extraction of 'useful and relevant' content from web pages has many applications, including cell phone and PDA browsing, speech rendering for the visually impaired, and text summarization. Most approaches to making content more readable involve changing font size or removing HTML and data components such as images, which takes away from a webpage's inherent look and feel. Unlike 'Content Reformatting', which aims to reproduce the entire webpage in a more convenient form, our solution directly addresses 'Content Extraction'. We have developed a framework that employs an easily extensible set of techniques. It incorporates advantages of previous work on content extraction. Our key insight is to work with DOM trees, a W3C specified interface that allows programs to dynamically access document structure, rather than with raw HTML markup. We have implemented our approach in a publicly available Web proxy to extract content from HTML web pages. This proxy can be used both centrally, administered for groups of users, as well as by individuals for personal browsers. We have also, after receiving feedback from users about the proxy, created a revised version with improved performance and accessibility in mind