Whole-genome re-sequencing of two Italian tomato landraces reveals sequence variations in genes associated with stress tolerance, fruit quality and long shelf-life traits

Tomato is a high value crop and the primary model for fleshy fruit development and ripening. Breeding priorities include increased fruit quality, shelf life and tolerance to stresses. To contribute towards this goal, we re-sequenced the genomes of Corbarino (COR) and Lucariello (LUC) landraces, which both possess the traits of plant adaptation to water deficit, prolonged fruit shelf-life and good fruit quality. Through the newly developed pipeline Reconstructor, we generated the genome sequences of COR and LUC using datasets of 65.8M and 56.4M of 30–150bp paired-end reads, respectively. New contigs including reads that could not be mapped to the tomato reference genome were assembled, and a total of 43, 054 and 44, 579 gene loci were annotated in COR and LUC. Both genomes showed novel regions with similarity to Solanum pimpinellifolium and Solanum pennellii. In addition to small deletions and insertions, 2, 000 and 1, 700 single nucleotide polymorphisms (SNPs) could exert potentially disruptive effects on 1, 371 and 1, 201 genes in COR and LUC, respectively. A detailed survey of the SNPs occurring in fruit quality, shelf life and stress tolerance related-genes identified several candidates of potential relevance. Variations in ethylene response components may concur in determining peculiar phenotypes of COR and LUC

Effect of Compost Tea in Horticulture

Nowadays, modern agriculture looks for valid, sustainable, and green alternatives that are able to improve and maintain soil quality and fertility over time. Recycling organic waste as fertilizer is one of the strategies for sustainable production. Recently, the use of new products derived from compost, such as compost tea (CT), is increasing due to their positive effects on crops. This perspective wants to give an updated shot at the effect of compost tea in horticulture. In addition to the classification of compost tea, with a focus on production procedures and composition, the possible effects they have both on the control of phytopathogens in horticulture and the influence they can have on the content of bioactive molecules and nutrients were highlighted. It is interesting to note that compost teas can have an effect on the final content of micro and macronutrients, thus improving the nutritional qualities and also increasing the content of bioactive compounds that may play a role in maintaining and improving human health. The combined use of compost tea with other treatments is being explored as a promising and innovative direction

Evaluation of Cadmium Effects on Six Solanum melongena L. Cultivars from the Mediterranean Basin

Cadmium (Cd) contamination is a severe problem in the environment and produces detrimental effects on crop productivity and quality. Characterization of crop performance at different Cd concentrations is crucial to identify pollution-safe cultivars with low translocation efficiency to aboveground organs to be used for food safety. Here, we estimated germination, survival, growth, photosynthetic pigments, Cd bioaccumulation, among-organs translocation, and ionic balance in six Solanum melongena L. (eggplant) cultivars from the central Mediterranean basin. On two cultivars, we also analyzed expression of genes involved in Cd uptake, i.e., heavy metal ATPases (HMAs) and metal tolerance proteins (MTPs). We found that Cd has a negative effect on all the investigated parameters but with relevant among-cultivar differences. Cd-treated plants showed a decrease in germination rate and survival. Photosynthetic pigments showed opposite trends, i.e., with increasing Cd contents, we observed a decrease in chlorophylls and an increase in carotenoids. The investigated cultivars showed high ability of sequestrating Cd in roots but a low translocation efficiency to the aboveground organs, suggesting a good potential for food safety. The response of plants to Cd was mediated by a different expression of the MTP and HMA gene families. Our study represents the first comprehensive investigation of Cd tolerance in eggplant varieties from the Mediterranean basin and highlights the importance of comparative studies to identify Cd-tolerant cultivars

Biochemical Characterization of Traditional Varieties of Sweet Pepper (Capsicum annuum L.) of the Campania Region, Southern Italy

Bioactive compounds of different Campania native sweet pepper varieties were evaluated. Polyphenols ranged between 1.37 mmol g−1 and 3.42 mmol g−1, β-carotene was abundant in the red variety “Cazzone” (7.05 μg g−1). Yellow and red varieties showed a content of ascorbic acid not inferior to 0.82 mg g−1, while in some green varieties the presence of ascorbic acid was almost inconsistent. Interrelationships between the parameters analyzed and the varieties showed that ascorbic acid could represent the factor mostly influencing the antioxidant activity. Polyphenol profile was different among the varieties, with a general prevalence of acidic phenols in yellow varieties and of flavonoids in red varieties. Principal Component Analysis, applied to ascorbic acid, total polyphenols and β-carotene, revealed that two of the green varieties (“Friariello napoletano” and “Friariello Sigaretta”) were well clustered and that the yellow variety “Corno di capra” showed similarity with the green varieties, in particular with “Friariello Nocerese”. This was confirmed by the interrelationships applied to polyphenol composition, which let us to light on a clustering of several red and yellow varieties, and that mainly the yellow ”Corno di capra” was closer to the green varieties of “Friariello”