582 research outputs found

    Spatial distribution of bacteria associated with the marine sponge Tethya californiana

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    Microbial diversity and spatial distribution of the diversity within tissue of the marine sponge Tethya californiana was analyzed based on 16S rRNA gene sequences. One candidate division and nine bacterial phyla were detected, including members of all five subdivisions of Proteobacteria. Moreover, chloroplast-derived Stramenopiles- and Rhodophyta-affiliated 16S rRNA gene sequences were found and Stramenopiles represented the most abundant clones (30%) in the clone library. On the phylum-level, the microbial fingerprint of T. californiana showed a similar pattern as its Mediterranean relative T. aurantium. An interesting difference was that Cyanobacteria that were abundantly present in T. aurantium were not found in T. californiana, but that the latter sponges harbored phototrophic Stramenopiles instead. Surprisingly, the phototrophic microorganisms were evenly distributed over the inner and outer parts of the sponge tissue, which implies that they also reside in regions without direct light exposure. The other phyla were also present in both the outer cortex and the mesohyl of the sponges. These results were confirmed by analysis on the operational taxonomic unit level. This leads to the conclusion that from a qualitative point of view, spatial distribution of microorganisms in T. californiana tissue is quite homogeneous. Thirty-two percent of the operational taxonomic units shared less than 95% similarity with any other known sequence. This indicates that marine sponges are a rich source of previously undetected microbial lif

    Spatial distribution of bacteria associated with the marine sponge Tethya californiana

    Get PDF
    Microbial diversity and spatial distribution of the diversity within tissue of the marine sponge Tethya californiana was analyzed based on 16S rRNA gene sequences. One candidate division and nine bacterial phyla were detected, including members of all five subdivisions of Proteobacteria. Moreover, chloroplast-derived Stramenopiles- and Rhodophyta-affiliated 16S rRNA gene sequences were found and Stramenopiles represented the most abundant clones (30%) in the clone library. On the phylum-level, the microbial fingerprint of T. californiana showed a similar pattern as its Mediterranean relative T. aurantium. An interesting difference was that Cyanobacteria that were abundantly present in T. aurantium were not found in T. californiana, but that the latter sponges harbored phototrophic Stramenopiles instead. Surprisingly, the phototrophic microorganisms were evenly distributed over the inner and outer parts of the sponge tissue, which implies that they also reside in regions without direct light exposure. The other phyla were also present in both the outer cortex and the mesohyl of the sponges. These results were confirmed by analysis on the operational taxonomic unit level. This leads to the conclusion that from a qualitative point of view, spatial distribution of microorganisms in T. californiana tissue is quite homogeneous. Thirty-two percent of the operational taxonomic units shared less than 95% similarity with any other known sequence. This indicates that marine sponges are a rich source of previously undetected microbial life

    Fungi found in Mediterranean and North Sea sponges : How specific are they?

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    Fungi and other eukaryotes represent one of the last frontiers of microbial diversity in the sponge holobiont. In this study we employed pyrosequencing of 18S ribosomal RNA gene amplicons containing the V7 and V8 hypervariable regions to explore the fungal diversity of seven sponge species from the North Sea and the Mediterranean Sea. For most sponges, fungi were present at a low relative abundance averaging 0.75% of the 18S rRNA gene reads. In total, 44 fungal OTUs (operational taxonomic units) were detected in sponges, and 28 of these OTUs were also found in seawater. Twentytwo of the sponge-associated OTUs were identified as yeasts (mainly Malasseziales), representing 84% of the fungal reads. Several OTUs were related to fungal sequences previously retrieved from other sponges, but all OTUs were also related to fungi from other biological sources, such as seawater, sediments, lakes and anaerobic digesters. Therefore our data, supported by currently available data, point in the direction of mostly accidental presence of fungi in sponges and do not support the existence of a sponge-specific fungal community

    Ultra short pulse laser generated surface textures for anti-ice applications in aviation

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    By laser ablation with ultra short laser pulses in the pico- and femto-second range, well controlled dual scaled micro- and nano-scaled surface textures can be obtained. The micro-scale of the texture is mainly determined by the dimensions of the laser spot, whereas the superimposed nano-structure is the result of socalled laser induced “self organizing nanostructuring”. By controlling this micro-nano surface texture, it is possible to modify the natural hydrophobicity of materials. This paper investigates the anti-ice properties of these hydrophobic micro-nano surface textures. Leading edges, engine inlets etc. of airplanes are prone to iceaccretion in certain icing conditions. Ice can distort the flow of air over the wing, reducing the aircrafts aerodynamic performance. Moreover, take-off is not permitted if ice contamination on the aircraft's surfaces exists. Two materials, popular in aviation, a titanium alloy (Ti-6Al-4V) and a stainless steel (1.4544.9), were laser-machined using UV laser pulses of 6.7 ps at 200 kHz. Surface textures were physically analyzed using optical microscopy and SEM. Coatings, on top of the textures, were applied to create super-hydrophobicity. The hydrophobicity of the surfaces was quantified by contact angle measurements. The anti-ice properties of the surfaces were tested in a climate chamber

    Clinical implications of acute exacerbations in COPD

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