Measuring spike train synchrony

Estimating the degree of synchrony or reliability between two or more spike trains is a frequent task in both experimental and computational neuroscience. In recent years, many different methods have been proposed that typically compare the timing of spikes on a certain time scale to be fixed beforehand. Here, we propose the ISI-distance, a simple complementary approach that extracts information from the interspike intervals by evaluating the ratio of the instantaneous frequencies. The method is parameter free, time scale independent and easy to visualize as illustrated by an application to real neuronal spike trains obtained in vitro from rat slices. In a comparison with existing approaches on spike trains extracted from a simulated Hindemarsh-Rose network, the ISI-distance performs as well as the best time-scale-optimized measure based on spike timing.Comment: 11 pages, 13 figures; v2: minor modifications; v3: minor modifications, added link to webpage that includes the Matlab Source Code for the method (http://inls.ucsd.edu/~kreuz/Source-Code/Spike-Sync.html

An update of the chemiosmotic theory as suggested by possible proton currents inside the coupling membrane

Understanding how biological systems convert and store energy is a primary purpose of basic research. However, despite Mitchell's chemiosmotic theory, we are far from the complete description of basic processes such as oxidative phosphorylation (OXPHOS) and photosynthesis. After more than half a century, the chemiosmotic theory may need updating, thanks to the latest structural data on respiratory chain complexes. In particular, up-to date technologies, such as those using fluorescence indicators following proton displacements, have shown that proton translocation is lateral rather than transversal with respect to the coupling membrane. Furthermore, the definition of the physical species involved in the transfer (proton, hydroxonium ion or proton currents) is still an unresolved issue, even though the latest acquisitions support the idea that protonic currents, difficult to measure, are involved. Moreover, F o F 1 -ATP synthase ubiquitous motor enzyme has the peculiarity (unlike most enzymes) of affecting the thermodynamic equilibrium of ATP synthesis. It seems that the concept of diffusion of the proton charge expressed more than two centuries ago by Theodor von Grotthuss is to be taken into consideration to resolve these issues. All these uncertainties remind us that also in biology it is necessary to consider the Heisenberg indeterminacy principle, which sets limits to analytical questions

A Light Supersymmetric Axion in an Anomalous Abelian Extension of the Standard Model

We present a supersymmetric extension of the Standard Model (USSM-A) with an anomalous U(1) and Stueckelberg axions for anomaly cancellation, generalizing similar non-supersymmetric constructions. The model, built by a bottom-up approach, is expected to capture the low-energy supersymmetric description of axionic symmetries in theories with gauged anomalous abelian interactions, previously explored in the non-supersymmetric case for scenarios with intersecting branes. The choice of a USSM-like superpotential, with one extra singlet superfield and an extra abelian symmetry, allows a physical axion-like particle in the spectrum. We describe some general features of this construction and in particular the modification of the dark-matter sector which involves both the axion and several neutralinos with an axino component. The axion is expected to be very light in the absence of phases in the superpotential but could acquire a mass which can also be in the few GeV range or larger. In particular, the gauging of the anomalous symmetry allows independent mass/coupling interaction to the gauge fields of this particle, a feature which is absent in traditional (invisible) axion models. We comment on the general implications of our study for the signature of moduli from string theory due to the presence of these anomalous symmetries.Comment: 46 pages, 28 figures. Revised version, accepted for a publication on Phys.Rev.

Insights into mantle-type volatiles contribution from dissolved gases in artesian waters of the Great Artesian Basin, Australia

The geochemical features of the volatiles dissolved in artesian thermal waters discharged over three basins (Millungera, Galilee and Cooper basin) of the Australian Great Artesian Basin (GAB) consistently indicate the presence of fluids from multiple gas sources located in the crust (e.g. sediments, oil reservoirs, granites) as well as minor but detectable contributions of mantle/magma-derived fluids. The gases extracted from 19 water samples and analyzed for their chemical and isotopic composition exhibit amounts of CO up to about 340mlSTP/L marked by a δC (Total Dissolved Carbon) ranging from -16.9 to +0.18‰ vs PDB, while CH concentrations vary from 4.4×10 to 4.9mlSTP/L. Helium contents were between 9 and >2800 times higher than equilibrium with Air Saturated Water (ASW), with a maximum value of 0.12mlSTP/L. Helium isotopic composition was in the 0.02-0.21 Ra range (Ra = air-normalized He/He ratio). The three investigated basins differ from each other in terms of both chemical composition and isotopic signatures of the dissolved gases whose origin is attributed to both mantle and crustal volatiles. Mantle He is present in the west-central and hottest part of the GAB despite no evidence of recent volcanism. We found that the partial pressure of helium, significantly higher in crustal fluids than in mantle-type volatiles, enhances the crustal He signature in the dissolved gases, thus masking the original mantle contribution. Neotectonic activity involving deep lithospheric structures and magma intrusions, highlighted by recent geophysical investigations, is considered to be the drivers of mantle/magmatic volatiles towards the surface. The results, although pertaining to artesian waters from a vast area of >542,000km, provide new constraints on volatile injection, and show that fluids' geochemistry can provide additional and independent information on the geo-tectonic settings of the Great Artesian Basin and its geothermal potential

Antibacterial coating of implants : are we missing something?

Implant-related infection is one of the leading reasons for failure in orthopaedics and trauma, and results in high social and economic costs. Various antibacterial coating technologies have proven to be safe and effective both in preclinical and clinical studies, with post-surgical implant-related infections reduced by 90% in some cases, depending on the type of coating and experimental setup used. economic assessment may enable the cost-to-benefit profile of any given antibacterial coating to be defined, based on the expected infection rate with and without the coating, the cost of the infection management, and the cost of the coating. After reviewing the latest evidence on the available antibacterial coatings, we quantified the impact caused by delaying their large-scale application. considering only joint arthroplasties, our calculations indicated that for an antibacterial coating, with a final user's cost price of \u20ac600 and able to reduce post-surgical infection by 80%, each year of delay to its large-scale application would cause an estimated 35 200 new cases of post-surgical infection in europe, equating to additional hospital costs of approximately \u20ac440 million per year. An adequate reimbursement policy for antibacterial coatings may benefit patients, healthcare systems, and related research, as could faster and more affordable regulatory pathways for the technologies still in the pipeline. This could significantly reduce the social and economic burden of implant-related infections in orthopaedics and trauma

Lattice dynamics and reduced thermal conductivity of filled skutterudites

The great reduction in thermal conductivity of skutterudites upon filling the ``void'' sites with Rare Earth (RE) ions is key to their favorable thermoelectric properties but remains to be understood. Using lattice dynamic models based on first principles calculations, we address the most popular microscopic mechanism, reduction via rattling ions. The model withstands inelastic neutron scattering and specific heat measurements, and refutes hypotheses of an anharmonic RE potential and of two distinct localized RE vibrations of disparate frequencies. It does indicate a strong hybridization between bare La vibrations and certain Sb-like phonon branches, suggesting anharmonic scattering by harmonic RE motions as an important mechanism for suppression of heat conductivity.Comment: modified version resubmitted to PRB. Results unchanged, text changed substantiall

Assessment of the kidneys: magnetic resonance angiography, perfusion and diffusion

Renal magnetic resonance (MR) imaging has undergone major improvements in the past several years. This review focuses on the technical basics and clinical applications of MR angiography (MRA) with the goal of enabling readers to acquire high-resolution, high quality renal artery MRA. The current role of contrast agents and their safe use in patients with renal impairment is discussed. In addition, an overview of promising techniques on the horizon for renal MR is provided. The clinical value and specific applications of renal MR are critically discussed

Italy and COVID-19: the changing patient flow in an orthopedic trauma center emergency department.

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The endophytic bacterial community of healthy and Xylella-infected olive sapwood

Endophytic bacteria are of biotechnological and agronomic interest as they promote plant healthiness by producing and secreting plant growth regulators, and antagonizing phytopathogens through the induction of resistance mechanisms, and the supply of nutritional elements. One of the factors that may influence the behavior of olive towards the ‘quick decline syndrome’ is the nature of the endophytic microbial community occurring in sapwood. Objectives of the research was to characterize the bacterial endophytic population occurring into the xylem of healthy and Xylellainfected olive trees by an isolation-dependent approach. Preliminary results indicate that under field conditions, the population level of cultivable endophytic bacteria is highly variable, being mainly affected by the host genotype, host age, and wilting severity. Among the different group are Pseudomonas, Bacillus, Lysinibacillus, Pantoea, Microbacterium, Stenotrophomonas, and Methylobacterium spp. Bacteria of the Methylobacetrium genus occupy the same ecological niche of X. fastidiosa subsp. pauca. It has been reported as potential biocontrol agent of the pathogen, being its population higher in citrus plant showing mild symptoms of variegated chlorosis. Further research is in progress to better characterize the different Methylobacterium strains, using both biochemical and molecular approaches, and to evaluate its activity in reducing the severity of olive quick decline syndrome