Residues of antimicrobial agents and related compounds of emerging concern in manure, water and soil Part 1 – Pilot-sampling campaign in Slovakia and first findings

In a thinking of circular economy, the understanding how problematic chemical substances may migrate and travel across the various boundaries of a life-cycle is of pivotal importance to ensure that the philosophy of reuse and recycle is not jeopardized by new risks of contamination. In this framework, veterinary medicinal products (VMP) and there, in particular the anti-microbial agents are a growing source of concern in the context of the reuse of processed manure as a fertilizer. This is mainly due to the lack of understanding of their role in the development of anti-microbial resistances and their propagation. While the mechanistic study how the propagation takes places at molecular genetic level receives much attention, the actual data situation on occurrence of VMPs and AMAs in agricultural land remains opaque and poor. In order to prepare a larger and EU-wide monitoring exercise on the waters exposed directly or indirectly to the (processed) manure a first pilot exercise was organised to develop an appropriate protocol. This first report compiles a series of background information collected, describes the execution of first pilot sampling and presents the first elements in the development of a validated analytical methods.JRC.D.2-Water and Marine Resource

Residues of antimicrobial agents and related compounds of emerging concern in manure, water and soil

In order to prepare a larger and EU-wide monitoring exercise aiming at the characterisation of processed manure as well as on the waters exposed directly or indirectly to the (processed) manure a first pilot exercise was organised to develop an appropriate protocol. While the first related report compiled a series of background information collected, the results on the analytical characterization of pilot sites operated by the Slovak University of Agriculture in Nitra are presented and discussed. Manure samples (processed and untreated), runoff, groundwater and surface water samples, were analysed for 488 compounds covering typical representatives of herbicides, fungicides, insecticides, pharmaceuticals, ingredients of personal care products and other industrially used chemicals. For 60 of these compounds (corresponding to 12 %), concentration above the established limits of quantification of these novel multi-compound technique were obtained. The study demonstrates the applicability of the hybrid target / non-target analytical approach called "Compound Fishing" and the reports presents the design for a related EU-wide exercise. Although this study does characterize the respective test sites, it delivers an understanding of environmental pressures created on sites and under real-field scenarios. The experimental work conducted allows also to establish a link between the evaluation of scientific literature, the biogeochemical modelling and the field conditions scenarios of when processed manure is applied.JRC.D.2-Water and Marine Resource

Phage Therapy:What Have We Learned?

In this article we explain how current events in the field of phage therapy may positively influence its future development. We discuss the shift in position of the authorities, academia, media, non-governmental organizations, regulatory agencies, patients, and doctors which could enable further advances in the research and application of the therapy. In addition, we discuss methods to obtain optimal phage preparations and suggest the potential of novel applications of phage therapy extending beyond its anti-bacterial action

The role of natural science collections in the biomonitoring of environmental contaminants in apex predators in support of the EU's zero pollution ambition

The chemical industry is the leading sector in the EU in terms of added value. However, contaminants pose a major threat and significant costs to the environment and human health. While EU legislation and international conventions aim to reduce this threat, regulators struggle to assess and manage chemical risks, given the vast number of substances involved and the lack of data on exposure and hazards. The European Green Deal sets a 'zero pollution ambition for a toxic free environment' by 2050 and the EU Chemicals Strategy calls for increased monitoring of chemicals in the environment. Monitoring of contaminants in biota can, inter alia: provide regulators with early warning of bioaccumulation problems with chemicals of emerging concern; trigger risk assessment of persistent, bioaccumulative and toxic substances; enable risk assessment of chemical mixtures in biota; enable risk assessment of mixtures; and enable assessment of the effectiveness of risk management measures and of chemicals regulations overall. A number of these purposes are to be addressed under the recently launched European Partnership for Risk Assessment of Chemicals (PARC). Apex predators are of particular value to biomonitoring. Securing sufficient data at European scale implies large-scale, long-term monitoring and a steady supply of large numbers of fresh apex predator tissue samples from across Europe. Natural science collections are very well-placed to supply these. Pan-European monitoring requires effective coordination among field organisations, collections and analytical laboratories for the flow of required specimens, processing and storage of specimens and tissue samples, contaminant analyses delivering pan-European data sets, and provision of specimen and population contextual data. Collections are well-placed to coordinate this. The COST Action European Raptor Biomonitoring Facility provides a well-developed model showing how this can work, integrating a European Raptor Biomonitoring Scheme, Specimen Bank and Sampling Programme. Simultaneously, the EU-funded LIFE APEX has demonstrated a range of regulatory applications using cutting-edge analytical techniques. PARC plans to make best use of such sampling and biomonitoring programmes. Collections are poised to play a critical role in supporting PARC objectives and thereby contribute to delivery of the EU's zero-pollution ambition.Non peer reviewe

The NORMAN Suspect List Exchange (NORMAN-SLE): facilitating European and worldwide collaboration on suspect screening in high resolution mass spectrometry

Background: The NORMAN Association (https://www.norman-.network.com/) initiated the NORMAN Suspect List Exchange (NORMAN-SLE; https://www.norman-.network.com/nds/SLE/) in 2015, following the NORMAN collaborative trial on non-target screening of environmental water samples by mass spectrometry. Since then, this exchange of information on chemicals that are expected to occur in the environment, along with the accompanying expert knowledge and references, has become a valuable knowledge base for "suspect screening" lists. The NORMAN-SLE now serves as a FAIR (Findable, Accessible, Interoperable, Reusable) chemical information resource worldwide.Results: The NORMAN-SLE contains 99 separate suspect list collections (as of May 2022) from over 70 contributors around the world, totalling over 100,000 unique substances. The substance classes include per- and polyfluoroalkyl substances (PFAS), pharmaceuticals, pesticides, natural toxins, high production volume substances covered under the European REACH regulation (EC: 1272/2008), priority contaminants of emerging concern (CECs) and regulatory lists from NORMAN partners. Several lists focus on transformation products (TPs) and complex features detected in the environment with various levels of provenance and structural information. Each list is available for separate download. The merged, curated collection is also available as the NORMAN Substance Database (NORMAN SusDat). Both the NORMAN-SLE and NORMAN SusDat are integrated within the NORMAN Database System (NDS). The individual NORMAN-SLE lists receive digital object identifiers (DOIs) and traceable versioning via a Zenodo community (https:// zenodo.org/communities/norman-.sle), with a total of > 40,000 unique views, > 50,000 unique downloads and 40 citations (May 2022). NORMAN-SLE content is progressively integrated into large open chemical databases such as PubChem (https://pubchem.ncbi.nlm.nih.gov/) and the US EPA's CompTox Chemicals Dashboard (https://comptox. epa.gov/dashboard/), enabling further access to these lists, along with the additional functionality and calculated properties these resources offer. PubChem has also integrated significant annotation content from the NORMAN-SLE, including a classification browser (https://pubchem.ncbi.nlm.nih.gov/classification/#hid=101).Conclusions: The NORMAN-SLE offers a specialized service for hosting suspect screening lists of relevance for the environmental community in an open, FAIR manner that allows integration with other major chemical resources. These efforts foster the exchange of information between scientists and regulators, supporting the paradigm shift to the "one substance, one assessment" approach. New submissions are welcome via the contacts provided on the NORMAN-SLE website (https://www.norman-.network.com/nds/SLE/)

The scientist, the politician, the artist and the citizen – How water united them in one book

The Urban Water Atlas for Europe constitutes an original overview of Urban Water Management in Europe, explaining and illustrating water in an unprecedented way and reflecting how water, the essence of life, flows through the arteries of our cities. Leading experts in water sciences and technologies, together with climate change researchers have joined artists and children in order to show how thirsty our cities really are and how we can cope with their growing demand for the most precious resource of our planet. The result is the first major publication of the Science and Knowledge Service of the European Commission, the JRC, which in a movement stemming from its Sci-Art Programme seeks to explore the important opportunities arising from the cross-fertilisation between science and art. The Atlas itself establishes the benchmark for over 40 cities, both European and from farther afield, in 30 different countries, in a manner which permits a vast range of municipalities to confront one of the greatest global challenges by employing local solutions in order to ensure a supply of water for all. It contains 95 scientific indicators and parameters, over 700 graphs, original illustrations and never seen before photographs and combines the work of 40 contributors from 22 organizations. Yet, the true value of this publication lies in the process of ensuring that the underlying scientific knowledge is available for societal uptake. The resolving of conflicts which stem from an exclusive self-understanding of traditional natural sciences, the difficulty to communicate the purpose of technological solutions and the challenge to engage in peer-to-peer discussion between the sciences, politics and the citizen constitute worthy lessons for both environmental experts and their social science counterparts.JRC.D.2-Water and Marine Resource

NORMAN Information Exchange: Suspect Lists and Mass Spectra

Presentation at the ICCE Satellite meeting in Oslo June 2017 on the NORMAN information exchange, MassBank, the EPA Chemistry Dashboard and suspect chemical list