447 research outputs found

    Applying Compactness Constraints to Differential Traveltime Tomography

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    Tomographic imaging problems are typically ill-posed and often require the use of regularization techniques to guarantee a stable solution. Minimization of a weighted norm of model length is one commonly used secondary constraint. Tikhonov methods exploit low-order differential operators to select for solutions that are small, flat, or smooth in one or more dimensions. This class of regularizing functionals may not always be appropriate, particularly in cases where the anomaly being imaged is generated by a non-smooth spatial process. Timelapse imaging of flow-induced velocity anomalies is one such case; flow features are often characterized by spatial compactness or connectivity. By performing inversions on differenced arrival time data, the properties of the timelapse feature can be directly constrained. We develop a differential traveltime tomography algorithm which selects for compact solutions i.e. models with a minimum area of support, through application of model-space iteratively reweighted least squares. Our technique is an adaptation of minimum support regularization methods previously explored within the potential theory community. We compare our inversion algorithm to the results obtained by traditional Tikhonov regularization for two simple synthetic models; one including several sharp localized anomalies and a second with smoother features. We use a more complicated synthetic test case based on multiphase flow results to illustrate the efficacy of compactness constraints for contaminant infiltration imaging. We conclude by applying the algorithm to a CO[subscript 2] sequestration monitoring dataset acquired at the Frio pilot site. We observe that in cases where the assumption of a localized anomaly is correct, the addition of compactness constraints improves image quality by reducing tomographic artifacts and spatial smearing of target features.Massachusetts Institute of Technology. Earth Resources Laborator

    “AI’s gonna have an impact on everything in society, so it has to have an impact on public health”: a fundamental qualitative descriptive study of the implications of artificial intelligence for public health

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    Background: Our objective was to determine the impacts of artificial intelligence (AI) on public health practice. Methods: We used a fundamental qualitative descriptive study design, enrolling 15 experts in public health and AI from June 2018 until July 2019 who worked in North America and Asia. We conducted in-depth semi-structured interviews, iteratively coded the resulting transcripts, and analyzed the results thematically. Results: We developed 137 codes, from which nine themes emerged. The themes included opportunities such as leveraging big data and improving interventions; barriers to adoption such as confusion regarding AI’s applicability, limited capacity, and poor data quality; and risks such as propagation of bias, exacerbation of inequity, hype, and poor regulation. Conclusions: Experts are cautiously optimistic about AI’s impacts on public health practice, particularly for improving disease surveillance. However, they perceived substantial barriers, such as a lack of available expertise, and risks, including inadequate regulation. Therefore, investment and research into AI for public health practice would likely be beneficial. However, increased access to high-quality data, research and education regarding the limitations of AI, and development of rigorous regulation are necessary to realize these benefits

    Translation-invariance of two-dimensional Gibbsian point processes

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    The conservation of translation as a symmetry in two-dimensional systems with interaction is a classical subject of statistical mechanics. Here we establish such a result for Gibbsian particle systems with two-body interaction, where the interesting cases of singular, hard-core and discontinuous interaction are included. We start with the special case of pure hard core repulsion in order to show how to treat hard cores in general.Comment: 44 pages, 6 figure

    Variational quantum algorithms for computational fluid dynamics

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    Quantum computing uses the physical principles of very small systems to develop computing platforms which can solve problems that are intractable on conventional supercomputers. There are challenges not only in building the required hardware but also in identifying the most promising application areas and developing the corresponding quantum algorithms. The availability of intermediate-scale noisy quantum computers is now propelling the developments of novel algorithms, with applications across a variety of domains, including in aeroscience. Variational quantum algorithms are particularly promising because they are comparatively noise tolerant and aim to achieve a quantum advantage with only a few hundred qubits. Furthermore, they are applicable to a wide range of optimization problems arising throughout the natural sciences and industry. To demonstrate the possibilities for the aeroscience community, we give a perspective on how variational quantum algorithms can be used in computational fluid dynamics. We discuss how classical problems are translated into quantum algorithms and their logarithmic scaling with problem size. For an explicit example, we apply this method to Burgers’s equation in one spatial dimension. We argue that a quantum advantage over classical computing methods could be achieved by the end of this decade if quantum hardware progresses as currently envisaged and emphasize the importance of joining up development of quantum algorithms with application-specific expertise to achieve a real-world impact

    Accelerometer-Measured Physical Activity Data Sets (Global Physical Activity Data Set Catalogue) That Include Markers of Cardiometabolic Health: Systematic Scoping Review

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    Background: Cardiovascular disease accounts for 17.9 million deaths globally each year. Many research study data sets have been collected to answer questions regarding the relationship between cardiometabolic health and accelerometer-measured physical activity. This scoping review aimed to map the available data sets that have collected accelerometer-measured physical activity and cardiometabolic health markers. These data were then used to inform the development of a publicly available resource, the Global Physical Activity Data set (GPAD) catalogue.Objective: This review aimed to systematically identify data sets that have measured physical activity using accelerometers and cardiometabolic health markers using either an observational or interventional study design.Methods: Databases, trial registries, and gray literature (inception until February 2021; updated search from February 2021 to September 2022) were systematically searched to identify studies that analyzed data sets of physical activity and cardiometabolic health outcomes. To be eligible for inclusion, data sets must have measured physical activity using an accelerometric device in adults aged ≥18 years; a sample size >400 participants (unless recruited participants in a low- and middle-income country where a sample size threshold was reduced to 100); used an observational, longitudinal, or trial-based study design; and collected at least 1 cardiometabolic health marker (unless only body mass was measured). Two reviewers screened the search results to identify eligible studies, and from these, the unique names of each data set were recorded, and characteristics about each data set were extracted from several sources.Results: A total of 17,391 study reports were identified, and after screening, 319 were eligible, with 122 unique data sets in these study reports meeting the review inclusion criteria. Data sets were found in 49 countries across 5 continents, with the most developed in Europe (n=53) and the least in Africa and Oceania (n=4 and n=3, respectively). The most common accelerometric brand and device wear location was Actigraph and the waist, respectively. Height and body mass were the most frequently measured cardiometabolic health markers in the data sets (119/122, 97.5% data sets), followed by blood pressure (82/122, 67.2% data sets). The number of participants in the included data sets ranged from 103,712 to 120. Once the review processes had been completed, the GPAD catalogue was developed to house all the identified data sets.Conclusions: This review identified and mapped the contents of data sets from around the world that have collected potentially harmonizable accelerometer-measured physical activity and cardiometabolic health markers. The GPAD catalogue is a web-based open-source resource developed from the results of this review, which aims to facilitate the harmonization of data sets to produce evidence that will reduce the burden of disease from physical inactivity

    Comprehensive methylome map of lineage commitment from haematopoietic progenitors.

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    Epigenetic modifications must underlie lineage-specific differentiation as terminally differentiated cells express tissue-specific genes, but their DNA sequence is unchanged. Haematopoiesis provides a well-defined model to study epigenetic modifications during cell-fate decisions, as multipotent progenitors (MPPs) differentiate into progressively restricted myeloid or lymphoid progenitors. Although DNA methylation is critical for myeloid versus lymphoid differentiation, as demonstrated by the myeloerythroid bias in Dnmt1 hypomorphs, a comprehensive DNA methylation map of haematopoietic progenitors, or of any multipotent/oligopotent lineage, does not exist. Here we examined 4.6 million CpG sites throughout the genome for MPPs, common lymphoid progenitors (CLPs), common myeloid progenitors (CMPs), granulocyte/macrophage progenitors (GMPs), and thymocyte progenitors (DN1, DN2, DN3). Marked epigenetic plasticity accompanied both lymphoid and myeloid restriction. Myeloid commitment involved less global DNA methylation than lymphoid commitment, supported functionally by myeloid skewing of progenitors following treatment with a DNA methyltransferase inhibitor. Differential DNA methylation correlated with gene expression more strongly at CpG island shores than CpG islands. Many examples of genes and pathways not previously known to be involved in choice between lymphoid/myeloid differentiation have been identified, such as Arl4c and Jdp2. Several transcription factors, including Meis1, were methylated and silenced during differentiation, indicating a role in maintaining an undifferentiated state. Additionally, epigenetic modification of modifiers of the epigenome seems to be important in haematopoietic differentiation. Our results directly demonstrate that modulation of DNA methylation occurs during lineage-specific differentiation and defines a comprehensive map of the methylation and transcriptional changes that accompany myeloid versus lymphoid fate decisions

    A reassuring presence: An evaluation of Bradford District Hospice at Home service

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    Within the United Kingdom, a developing role for primary care services in cancer and palliative care has resulted in an increase in palliative home care teams. The provision of professional care in the home setting seeks to provide necessary services and enhanced choice for patients whose preference is to die at home. A mismatch between patient preference for home death and the actual number of people who died at home was identified within Bradford, the locality of this study. In response to this mismatch, and reflecting the policy environment of wishing to enhance community service provision, the four Primary Care Trusts (PCTs) in the city sought to offer support to patients who wished to remain in their own homes through the final stages of a terminal illness. To offer this support they set up a dedicated hospice at home team. This would provide services and support for patients in achieving a dignified, symptom free and peaceful death, allowing families to maximise time spent together. The aim of the study was to evaluate the Bradford hospice at home service from the perspective of carers, nurses and General Practitioners. Postal questionnaires were sent to carers (n = 289), district nurses (n = 508) and GP's (n = 444) using Bradford's hospice at home service. Resulting quantitative data was analysed using the Statical Package for Social Sciences (SPSS) and qualitative data was analysed using grounded theory techniques. The data from carers, district nurses and GPs provide general support for the Bradford hospice at home service. Carers valued highly the opportunity to 'fulfil a promise' to the individual who wished to be cared for at home. District nurses and GPs cited the positive impact of access to specialist expertise. This was a 'reassuring presence' for primary healthcare teams and offered 'relief of carer anxiety' by providing prompt, accessible and sensitive care. Carers and health professionals welcomed the increased possibility of patients being cared for at home. The study identified the need to focus on improving skill levels of staff and on ensuring continuity of care

    Renewal processes and fluctuation analysis of molecular motor stepping

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    We model the dynamics of a processive or rotary molecular motor using a renewal processes, in line with the work initiated by Svoboda, Mitra and Block. We apply a functional technique to compute different types of multiple-time correlation functions of the renewal process, which have applications to bead-assay experiments performed both with processive molecular motors, such as myosin V and kinesin, and rotary motors, such as F1-ATPase
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