Novel Combined Freeze-Drying and Instant Controlled Pressure Drop Drying for Restructured Carrot-Potato Chips: Optimized by Response Surface Method

Combined freeze-drying and instant controlled pressure drop process (FD-DIC) for restructured carrot-potato chips was developed and its processing conditions were optimized using response surface methodology (RSM) with the purpose of improving the quality of products and reducing energy consumption. Three critical variables including the amount of carrot, the moisture content of the partially dried product before DIC treatment, and equilibrium temperature of DIC for the restructured chips were considered. Response parameters such as the final moisture content, color value (L, a, and b), and texture properties of restructured carrot-potato chips were investigated. The results showed that the graphical optimal ranges of FD-DIC drying process were as follows: the amount of carrot was 46–54% w/w, the moisture content of the partially dried product before DIC treatment was 0.20–0.35 g/g, and the equilibrium temperature of DIC was 85–95°C. Furthermore, the numerical optimization suggested that conditions were 47.43% w/w, 0.29 g/g, and 90.57°C, respectively. It could be concluded that the combined drying method of FD-DIC provided the restructured carrot-potato chips with higher quality, as compared to the freeze-dried chips. Considering the relatively high production cost of FD, this novel FD-DIC could be an alternative method for obtaining desirable restructured fruit and vegetable chips

Re-evaluation of the carcinogenic significance of hepatitis B virus integration in hepatocarcinogenesis

To examine the role of hepatitis B virus (HBV) integration in hepatocarcinogenesis, a systematic comparative study of both tumor and their corresponding non-tumor derived tissue has been conducted in a cohort of 60 HBV associated hepatocellular carcinoma (HCC) patients. By using Alu-polymerase chain reaction (PCR) and ligation-mediated PCR, 233 viral-host junctions mapped across all human chromosomes at random, no difference between tumor and non-tumor tissue was observed, with the exception of fragile sites (P = 0.0070). HBV insertions in close proximity to cancer related genes such as hTERT were found in this study, however overall they were rare events. No direct correlation between chromosome aberrations and the number of HBV integration events was found using a sensitive array-based comparative genomic hybridization (aCGH) assay. However, a positive correlation was observed between the status of several tumor suppressor genes (TP53, RB1, CDNK2A and TP73) and the number of chromosome aberrations (r = 0.6625, P = 0.0003). Examination of the viral genome revealed that 43% of inserts were in the preC/C region and 57% were in the HBV X gene. Strikingly, approximately 24% of the integrations examined had a breakpoint in a short 15 nt viral genome region (1820-1834 nt). As a consequence, all of the confirmed X gene insertions were C-terminal truncated, losing their growth-suppressive domain. However, the same pattern of X gene C-terminal truncation was found in both tumor and non-tumor derived samples. Furthermore, the integrated viral sequences in both groups had a similar low frequency of C1653T, T1753V and A1762T/G1764A mutations. The frequency and patterns of HBV insertions were similar between tumor and their adjacent non-tumor samples indicating that the majority of HBV DNA integration events are not associated with hepatocarcinogenesis

Optimal sparsity allows reliable system-aware restoration of fluorescence microscopy images

Incluye: artículo, material suplementario, videos y software.Fluorescence microscopy is one of the most indispensable and informative driving forces for biological research, but the extent of observable biological phenomena is essentially determined by the content and quality of the acquired images. To address the different noise sources that can degrade these images, we introduce an algorithm for multiscale image restoration through optimally sparse representation (MIRO). MIRO is a deterministic framework that models the acquisition process and uses pixelwise noise correction to improve image quality. Our study demonstrates that this approach yields a remarkable restoration of the fluorescence signal for a wide range of microscopy systems, regardless of the detector used (e.g., electron-multiplying charge-coupled device, scientific complementary metal-oxide semiconductor, or photomultiplier tube). MIRO improves current imaging capabilities, enabling fast, low-light optical microscopy, accurate image analysis, and robust machine intelligence when integrated with deep neural networks. This expands the range of biological knowledge that can be obtained from fluorescence microscopy.We acknowledge the support of the National Institutes of Health grants R35GM124846 (to S.J.) and R01AA028527 (to C.X.), the National Science Foundation grants BIO2145235 and EFMA1830941 (to S.J.), and Marvin H. and Nita S. Floyd Research Fund (to S.J.). This research project was supported, in part, by the Emory University Integrated Cellular Imaging Microscopy Core and by PHS Grant UL1TR000454 from the Clinical and Translational Science Award Program, National Institutes of Health, and National Center for Advancing Translational Sciences.S

CTCF-mediated transcriptional regulation through cell type-specific chromosome organization in the {\beta}-globin locus

The principles underlying the architectural landscape of chromatin beyond the nucleosome level in living cells remains largely unknown despite its potential to play a role in mammalian gene regulation. We investigated the 3-dimensional folding of a 1 Mbp region of human chromosome 11 containing the {\beta}-globin genes by integrating looping interactions of the insulator protein CTCF determined comprehensively by chromosome conformation capture (3C) into a polymer model of chromatin. We find that CTCF-mediated cell type specific interactions in erythroid cells are organized to favor contacts known to occur in vivo between the {\beta}-globin locus control region (LCR) and genes. In these cells, the modeled {\beta}-globin domain folds into a globule with the LCR and the active globin genes on the periphery. By contrast, in non-erythroid cells, the globule is less compact with few but dominant CTCF interactions driving the genes away from the LCR. This leads to a decrease in contact frequencies that can exceed 1000-fold depending on the stiffness of the chromatin and the exact positioning of the genes. Our findings show that an ensemble of CTCF contacts functionally affects spatial distances between control elements and target genes contributing to chromosomal organization required for transcription.Comment: Full article, including Supp. Mat., is available at Nucleic Acids Research, doi: 10.1093/nar/gks53

Modeling of non-point source nitrogen pollution from 1979 to 2008 in Jiaodong Peninsula, China

Efforts to reduce land-based non-point source (NPS) pollutions from watersheds to coastal waters are ongoing all around the world. In this study, annual yield of NPS nitrogen (NPS-N) pollution in Jiaodong Peninsula, China from 1979 to 2008 was estimated. The results showed that: from 1979 to 2008, NPS-N yields exhibited significant inter-annual variations and an increasing trend on decadal scale. High NPS-N yield was mainly found in east and south parts, as well as the urbanized coastal regions in Jiaodong Peninsula. Among the 32 river basins, the three largest basins yielded more than 41.16% of the NPS-N. However, some small coastal watersheds along the South Yellow Sea and Jiaozhou Bay had higher per unit area yield. Most of the small watersheds characterized by seasonal runoff had coastal waters pertain to mild and moderate pollution levels. The ratio of watershed area to shoreline length and the up-stream land use had significant impacts on NPS-N flux through the shoreline. Among the four adjacent coastal areas of Jiaodong Peninsula, Jiaozhou Bay was the most noteworthy one not only because of high levels of land-based NPS-N pollution but also because of its nearly enclosed structure. The combination between integrated coastal zone management and integrated river basin management, land use planning and landscape designing in Jiaodong Peninsula is recommended. Copyright (c) 2013 John Wiley & Sons, Ltd.Efforts to reduce land-based non-point source (NPS) pollutions from watersheds to coastal waters are ongoing all around the world. In this study, annual yield of NPS nitrogen (NPS-N) pollution in Jiaodong Peninsula, China from 1979 to 2008 was estimated. The results showed that: from 1979 to 2008, NPS-N yields exhibited significant inter-annual variations and an increasing trend on decadal scale. High NPS-N yield was mainly found in east and south parts, as well as the urbanized coastal regions in Jiaodong Peninsula. Among the 32 river basins, the three largest basins yielded more than 41.16% of the NPS-N. However, some small coastal watersheds along the South Yellow Sea and Jiaozhou Bay had higher per unit area yield. Most of the small watersheds characterized by seasonal runoff had coastal waters pertain to mild and moderate pollution levels. The ratio of watershed area to shoreline length and the up-stream land use had significant impacts on NPS-N flux through the shoreline. Among the four adjacent coastal areas of Jiaodong Peninsula, Jiaozhou Bay was the most noteworthy one not only because of high levels of land-based NPS-N pollution but also because of its nearly enclosed structure. The combination between integrated coastal zone management and integrated river basin management, land use planning and landscape designing in Jiaodong Peninsula is recommended. Copyright (c) 2013 John Wiley & Sons, Ltd

Insulators and imprinting from flies to mammals

The nuclear factor CTCF has been shown to be necessary for the maintenance of genetic imprinting at the mammalian H19/Igf2 locus. MacDonald and colleagues now report in BMC Biology that the mechanisms responsible for maintaining the imprinted state in Drosophila may be evolutionarily conserved and that CTCF may also play a critical role in this process

Repair Wind Field of Oil Spill Regional Using SAR Data

In this paper, we compared the normalized radar cross section (NRCS) of the synthetic aperture radar in the cases of oil spill and clean sea areas with image samples and determined their thresholds of the NRCS of SAR. we used the NRCS of clean water from the adjacent patches spill area to replace NRCS of oil spill area and retrieval wind field by CMOD5.N and comparison of wind velocity mending of oil spill with Model data the root mean square of wind speed and wind direction inversion are 0.89m/s and 20.26 satisfactory results, respectively. Therefore, after the occurrence not large scale oil spill, the real wind field could be restored by this method.&nbsp

Simulated runoff responses to land use in the middle and upstream reaches of Taoerhe River basin, Northeast China, in wet, average and dry years

Study on runoff variations and responses can lay a foundation for flood control, water allocation and integrated river basin management. This study applied the Soil and Water Assessment Tool model to simulate the effects of land use on annual and monthly runoff in the Middle and Upstream Reaches of Taoerhe River basin, Northeast China, under the wet, average and dry climate conditions through scenario analysis. The results showed that from the early 1970s to 2000, land use change with an increase in farmland (17.0%) and decreases in forest (10.6%), grassland (4.6%) and water body (3.1%) caused increases in annual and monthly runoff. This effect was more distinct in the wet season or in the wet year, suggesting that land use change from the early 1970s to 2000 may increase the flood potential in the wet season. Increases in precipitation and air temperature from the average to wet year led to annual and monthly (March and from June to December) runoff increases, while a decrease in precipitation and an increase in air temperature from the average to dry year induced decreases in annual and monthly (all months except March) runoff, and moreover, these effects were more remarkable in the wet season than those in the dry season. Due to the integrated effects of changing land use and climate conditions, the annual runoff increased (decreased) by 70.1mm (25.2mm) or 197.4% (71.0%) from the average to wet (dry) year. In conclusion, climate conditions, especially precipitation, played an important role in runoff variations while land use change was secondary over the study area, and furthermore, the effects of changes in land use and/or climate conditions on monthly runoff were larger in the wet season. Copyright (c) 2012 John Wiley & Sons, Ltd.Study on runoff variations and responses can lay a foundation for flood control, water allocation and integrated river basin management. This study applied the Soil and Water Assessment Tool model to simulate the effects of land use on annual and monthly runoff in the Middle and Upstream Reaches of Taoerhe River basin, Northeast China, under the wet, average and dry climate conditions through scenario analysis. The results showed that from the early 1970s to 2000, land use change with an increase in farmland (17.0%) and decreases in forest (10.6%), grassland (4.6%) and water body (3.1%) caused increases in annual and monthly runoff. This effect was more distinct in the wet season or in the wet year, suggesting that land use change from the early 1970s to 2000 may increase the flood potential in the wet season. Increases in precipitation and air temperature from the average to wet year led to annual and monthly (March and from June to December) runoff increases, while a decrease in precipitation and an increase in air temperature from the average to dry year induced decreases in annual and monthly (all months except March) runoff, and moreover, these effects were more remarkable in the wet season than those in the dry season. Due to the integrated effects of changing land use and climate conditions, the annual runoff increased (decreased) by 70.1mm (25.2mm) or 197.4% (71.0%) from the average to wet (dry) year. In conclusion, climate conditions, especially precipitation, played an important role in runoff variations while land use change was secondary over the study area, and furthermore, the effects of changes in land use and/or climate conditions on monthly runoff were larger in the wet season. Copyright (c) 2012 John Wiley & Sons, Ltd

Effects of Intensive Blood Pressure Reduction on Acute Intracerebral Hemorrhage: A Systematic Review and Meta-analysis

Current opinions about the effect of intensive blood pressure (BP) reduction for acute intracerebral hemorrhage (ICH) are inconsistent. We performed a meta-analysis to evaluate the efficacy and safety of intensive BP reduction for acute ICH by analyzing data from several recent randomized controlled trials (RCTs). There were six eligible studies that met the inclusion criteria, for a total of 4,385 acute ICH patients in this meta-analysis. After analyzing these data, we found differences between intensive and standard BP lowering treatment groups in total mortality rates, unfavorable outcomes, hematoma expansion, neurologic deterioration, and severe hypotension were not significant. Moreover, compared with the standard treatment, the rate of renal adverse event in intensive treatment group was significantly higher. The intensive treatment approach was recommended in the following situations: (1) longer prehospital duration; (2) lower National Institute of Health stroke scale (NIHSS) score; (3) no hypertension history