Physiognomic and physiologic changes in mountain grasslands in response to environmental and anthropogenic factors

Mountain grasslands provide valuable ecosystem services for sustainable development and human wellbeing. These habitats have suffered important changes related with their physiognomic (biomass) and physiologic (greenness) properties. Some of these changes received significant attention i.e. woody encroachment, while others, like the changes in biomass and greenness of those grasslands that have not experienced woody encroachment are almost unknown. We calculated physiognomic and physiologic properties for dense grasslands not affected by woody encroachment through the Normalized Difference Vegetation Index (NDVI) and Normalized Difference Infrared Index (NDII) from Landsat-5 Thematic Mapper. Imagery taken in the late-1980s and late-2000s in the Spanish Pyrenees were analyzed with multi-temporal vectors to detect increases or decreases of biomass and greenness. To understand the source of these changes, we modeled them with anthropogenic (land use, i.e. grazing, ski resorts, and related infrastructures) and environmental factors (topographic, lithologic and climatic). Anthropogenic factors were most strongly correlated with decrease in the biomass and greenness, showing degradation patterns of the grasslands at localized patches. Nonetheless, environmental factors were most strongly correlated with positive changes in both indices, detecting a continuous pattern in the increase in biomass and greenness. In areas that had high livestock stocking rates, grasslands biomass and greenness decrease, while in areas that had low stocking rates, biomass and greenness increases. Grasslands at low elevation showing decrease in biomass and greenness were either on gentle slopes and largely affected by human activities, or on steep slopes locally affected by ski resorts. In areas that have been disturbed by anthropogenic factors, the increase of rain in early summer trigger erosion processes, enhancing the negative effect of anthropic pressure on grassland greenness and biomass. In contrast, grasslands at high elevations, on steep slopes, and those that had north or west aspects and that had an acidic lithology, with less continentality, and that received more rain, had the most increase in biomass and greenness. Those results suggest that changes in mountain grasslands, apart from woody encroachment, are deeply altering their physiology and physiognomy, pointing out direct relationships with current management practices and climate trends.This research was funded by the following research projects; Ref.:125/2010 MMAMRM (Spanish Ministry of Agriculture and Environment), CGL2011-27259 (Spanish Ministry of Economy and Competitiveness and Innovation) co-financed by the FEDER, and FW7 ENV.2009.2.1.3.2-LEDDRA (European Community). CGB was supported by the AXA Research Fund (PDOC_2011_W2) and Killam Postdoctoral Fellowship (University of Alberta (2012-2013)). F. Fillat and R. García provided interesting comments and supporting climatic information.Peer reviewe

Hydro-physical responses of gypseous and non-gypseous soils to livestock grazing in a semi-arid region of NE Spain

20 Pag., 4 Figs., 1 Tabl. The definitive version is available at: http://www.sciencedirect.com/science/journal/03783774Pasture productivity depends on soil hydro-physical properties, which in turn are deeply affected by livestock grazing. However, the comparative response of different soil types, and particularly gypseous soil types, to grazing has hardly been studied before. This paper compares the effect of grazing on the soil hydro-physical properties of silty gypseous (Gy) and non-gypseous (NGy) soils located in a semi-arid region (Middle Ebro Valley, NE, Spain). Two different soil managements were selected: ungrazed natural shrubland (N) and grazed shrubland (GR) soils. The gypsum, CaCO3 and organic matter content (OM), soil texture, soil bulk density ( b), penetration resistance (PR), saturated sorptivity (S), hydraulic conductivity (K), and the water retention curve (WRC) for undisturbed soil samples from 1 to 10 cm depth soil layer were measured. The b and PR in NGy soils were significantly higher than those observed in the Gy ones. Soil compaction due to grazing treatment tended to increase b and decrease the K and S values. While no differences in PR were observed in the Gy soils between grazing treatments, the PR measured in the NGy soils under GR was significantly higher than the corresponding values observed under N. Differences in K and S between GR and N treatments were only significant (p < 0.05) in NGy soils, where K and S values under the N treatment were almost four times greater than the corresponding values measured under GR. Overall, no differences in the WRCs were observed between soil types and grazing treatments. While the WRCs of NGy soils were not significantly affected by the grazing treatment, Gy soils under N treatment present a significantly higher level of soil macropores than under GR treatment. The hydro-physical features of Gy soils tended to be less affected by grazing than those of the NGy soils. These results suggest that livestock grazing, in both Gy and NGy soils, has a negative effect on the physical soil properties, which should be taken into account by land managers of these semi-arid regions where silty gypseous and non-gypseous areas coexist.This research was supported by Aragón regional government and La Caixa (Grants: GA-LC020/2010; GA-LC-010/2008) and the CSIC (Grant: PIE-200930I145).Peer reviewe

Herbivoría de zonas árticas y alpinas en el contexto del cambio global

1 páginaPeer reviewe

Mycorrhizae for a sustainable world

New Phytologist Meeting Report for the 10th International Conference on Mycorrhiza (ICOM10), Mérida, Mexico, June 30 – July 5 201

Background invertebrate herbivory on dwarf birch (Betula glandulosa-nana complex) increases with temperature and precipitation across the tundra biome

Chronic, low intensity herbivory by invertebrates, termed background herbivory, has been understudied in tundra, yet its impacts are likely to increase in a warmer Arctic. The magnitude of these changes is however hard to predict as we know little about the drivers of current levels of invertebrate herbivory in tundra. We assessed the intensity of invertebrate herbivory on a common tundra plant, the dwarf birch (Betula glandulosa-nana complex), and investigated its relationship to latitude and climate across the tundra biome. Leaf damage by defoliating, mining and gall-forming invertebrates was measured in samples collected from 192 sites at 56 locations. Our results indicate that invertebrate herbivory is nearly ubiquitous across the tundra biome but occurs at low intensity. On average, invertebrates damaged 11.2% of the leaves and removed 1.4% of total leaf area. The damage was mainly caused by external leaf feeders, and most damaged leaves were only slightly affected (12% leaf area lost). Foliar damage was consistently positively correlated with mid-summer (July) temperature and, to a lesser extent, precipitation in the year of data collection, irrespective of latitude. Our models predict that, on average, foliar losses to invertebrates on dwarf birch are likely to increase by 6&ndash;7% over the current levels with a 1 &deg;C increase in summer temperatures. Our results show that invertebrate herbivory on dwarf birch is small in magnitude but given its prevalence and dependence on climatic variables, background invertebrate herbivory should be included in predictions of climate change impacts on tundra ecosystems. &copy; 2017 Springer-Verlag GmbH GermanyAdditional co-authors: Katherine S. Christie, Yulia V. Denisova, Dagmar Egelkraut, Dorothee Ehrich, LeeAnn Fishback, Bruce C. Forbes, Maite Gartzia, Paul Grogan, Martin Hallinger, Monique M. P. D. Heijmans, David S. Hik, Annika Hofgaard, Milena Holmgren, Toke T. Høye, Diane C. Huebner, Ingibjorg Svala Jonsdottir, Elina Kaarlejarvi, Timo Kumpula, Cynthia Y. M. J. G. Lange, Jelena Lange, Esther Levesque, Juul Limpens, Marc Macias-Fauria, Isla Myers-Smith, Erik J. van Nieukerken, Signe Normand, Eric S. Post, Niels Martin Schmidt, Judith Sitters, Anna Skoracka, Alexander Sokolov, Natalya Sokolova, James D. M. Speed, Lorna E. Street, Maja K. Sundqvist, Otso Suominen, Nikita Tananaev, Jean-Pierre Tremblay, Christine Urbanowicz, Sergey A. Uvarov, David Watts, Martin Wilmking, Heike H. Zimmermann, Vitali Zverev, Mikhail V. Kozlo

The role of plant-associated bacteria, fungi, and viruses in drought stress mitigation.

Abstract: Drought stress is an alarming constraint to plant growth, development, and productivity worldwide. However, plant-associated bacteria, fungi, and viruses can enhance stress resistance and cope with the negative impacts of drought through the induction of various mechanisms, which involve plant biochemical and physiological changes. These mechanisms include osmotic adjustment, antioxidant enzyme enhancement, modification in phytohormonal levels, biofilm production, increased water and nutrient uptake as well as increased gas exchange and water use efficiency. Production of microbial volatile organic compounds (mVOCs) and induction of stress-responsive genes by microbes also play a crucial role in the acquisition of drought tolerance. This review offers a unique exploration of the role of plant-associated microorganisms?plant growth promoting rhizobacteria and mycorrhizae, viruses, and their interactions?in the plant microbiome (or phytobiome) as a whole and their modes of action that mitigate plant drought stress

Metabarcoding of soil environmental DNA to estimate plant diversity globally

IntroductionTraditional approaches to collecting large-scale biodiversity data pose huge logistical and technical challenges. We aimed to assess how a comparatively simple method based on sequencing environmental DNA (eDNA) characterises global variation in plant diversity and community composition compared with data derived from traditional plant inventory methods. MethodsWe sequenced a short fragment (P6 loop) of the chloroplast trnL intron from from 325 globally distributed soil samples and compared estimates of diversity and composition with those derived from traditional sources based on empirical (GBIF) or extrapolated plant distribution and diversity data. ResultsLarge-scale plant diversity and community composition patterns revealed by sequencing eDNA were broadly in accordance with those derived from traditional sources. The success of the eDNA taxonomy assignment, and the overlap of taxon lists between eDNA and GBIF, was greatest at moderate to high latitudes of the northern hemisphere. On average, around half (mean: 51.5% SD 17.6) of local GBIF records were represented in eDNA databases at the species level, depending on the geographic region. DiscussioneDNA trnL gene sequencing data accurately represent global patterns in plant diversity and composition and thus can provide a basis for large-scale vegetation studies. Important experimental considerations for plant eDNA studies include using a sampling volume and design to maximise the number of taxa detected and optimising the sequencing depth. However, increasing the coverage of reference sequence databases would yield the most significant improvements in the accuracy of taxonomic assignments made using the P6 loop of the trnL region

An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics

For a decade, The Cancer Genome Atlas (TCGA) program collected clinicopathologic annotation data along with multi-platform molecular profiles of more than 11,000 human tumors across 33 different cancer types. TCGA clinical data contain key features representing the democratized nature of the data collection process. To ensure proper use of this large clinical dataset associated with genomic features, we developed a standardized dataset named the TCGA Pan-Cancer Clinical Data Resource (TCGA-CDR), which includes four major clinical outcome endpoints. In addition to detailing major challenges and statistical limitations encountered during the effort of integrating the acquired clinical data, we present a summary that includes endpoint usage recommendations for each cancer type. These TCGA-CDR findings appear to be consistent with cancer genomics studies independent of the TCGA effort and provide opportunities for investigating cancer biology using clinical correlates at an unprecedented scale. Analysis of clinicopathologic annotations for over 11,000 cancer patients in the TCGA program leads to the generation of TCGA Clinical Data Resource, which provides recommendations of clinical outcome endpoint usage for 33 cancer types