Hydrodynamic behavior in expanding thermal clouds of Rb-87

We study hydrodynamic behavior in expanding thermal clouds of Rb-87 released from an elongated trap. At our highest densities the mean free path is smaller than the radial size of the cloud. After release the clouds expand anisotropically. The cloud temperature drops by as much as 30%. This is attributed to isentropic cooling during the early stages of the expansion. We present an analytical model to describe the expansion and to estimate the cooling. Important consequences for time-of-flight thermometry are discussed.Comment: 7 pages with 2 figure

A high-throughput synthetic platform enables the discovery of proteomimetic cell penetrating peptides and bioportides

Collectively, cell penetrating peptide (CPP) vectors and intrinsically active bioportides possess tremendous potential for drug delivery applications and the discrete modulation of intracellular targets including the sites of protein–protein interactions (PPIs). Such sequences are usually relatively short (< 25 AA), polycationic in nature and able to access the various intracellular compartments of eukaryotic cells without detrimental influences upon cellular biology. The high-throughput platform for bioportide discovery described herein exploits the discovery that many human proteins are an abundant source of potential CPP sequences which are reliably predicted using QSAR algorithms or other methods. Subsequently, microwave-enhanced solid phase peptides synthesis provides a high-throughput source of novel proteomimetic CPPs for screening purposes. By focussing upon cationic helical domains, often located within the molecular interfaces that facilitate PPIs, bioportides which act by a dominant-negative mechanism at such sites can be reliably identified within small number libraries of CPPs. Protocols that employ fluorescent peptides, routinely prepared by N-terminal acylation with carboxytetramethylrhodamine, further enable both the quantification of cellular uptake kinetics and the identification of specific site(s) of intracellular accretion. Chemical modifications of linear peptides, including strategies to promote and stabilise helicity, are compatible with the synthesis of second-generation bioportides with improved drug-like properties to further exploit the inherent selectivity of biologics

Small molecules, big targets: drug discovery faces the protein-protein interaction challenge.

Protein-protein interactions (PPIs) are of pivotal importance in the regulation of biological systems and are consequently implicated in the development of disease states. Recent work has begun to show that, with the right tools, certain classes of PPI can yield to the efforts of medicinal chemists to develop inhibitors, and the first PPI inhibitors have reached clinical development. In this Review, we describe the research leading to these breakthroughs and highlight the existence of groups of structurally related PPIs within the PPI target class. For each of these groups, we use examples of successful discovery efforts to illustrate the research strategies that have proved most useful.JS, DES and ARB thank the Wellcome Trust for funding.This is the author accepted manuscript. The final version is available from Nature Publishing Group via http://dx.doi.org/10.1038/nrd.2016.2

End-to-End Argumentation Knowledge Graph Construction

This paper studies the end-to-end construction of an argumentation knowledge graph that is intended to support argument synthesis, argumentative question answering, or fake news detection, among others. The study is motivated by the proven effectiveness of knowledge graphs for interpretable and controllable text generation and exploratory search. Original in our work is that we propose a model of the knowledge encapsulated in arguments. Based on this model, we build a new corpus that comprises about 16k manual annotations of 4740 claims with instances of the model's elements, and we develop an end-to-end framework that automatically identifies all modeled types of instances. The results of experiments show the potential of the framework for building a web-based argumentation graph that is of high quality and large scale

Photoelectron and fragmentation dynamics of the H++ H+ dissociative channel in NH3 following direct single-photon double ionization

We report measurements on the H++H+ fragmentation channel following direct single-photon double ionization of neutral NH3 at 61.5 eV, where the two photoelectrons and two protons are measured in coincidence using three-dimensional (3D) momentum imaging. We identify four dication electronic states that contribute to H++H+ dissociation, based on our multireference configuration-interaction calculations of the dication potential energy surfaces. The extracted branching ratios between these four dication electronic states are presented. Of the four dication electronic states, three dissociate in a concerted process, while the fourth undergoes a sequential fragmentation mechanism. We find evidence that the neutral NH fragment or intermediate NH+ ion is markedly rovibrationally excited. We also identify differences in the relative emission angle between the two photoelectrons as a function of their energy sharing for the four different dication states, which bare some similarities to previous observations made on atomic targets

Mechanisms and dynamics of the NH+2+ H+and NH++ H++ H fragmentation channels upon single-photon double ionization of NH3

We present state-selective measurements on the NH2+ + H+ and NH+ + H+ + H dissociation channels following single-photon double ionization at 61.5 eV of neutral NH3, where the two photoelectrons and two cations are measured in coincidence using 3D momentum imaging. Three dication electronic states are identified to contribute to the NH2+ + H+ dissociation channel, where the excitation in one of the three states undergoes intersystem crossing prior to dissociation, producing a cold NH2+ fragment. In contrast, the other two states directly dissociate, producing a ro-vibrationally excited NH2+ fragment with roughly 1 eV of internal energy. The NH+ + H+ + H channel is fed by direct dissociation from three intermediate dication states, one of which is shared with the NH2+ + H+ channel. We find evidence of autoionization contributing to each of the double ionization channels. The distributions of the relative emission angle between the two photoelectrons, as well as the relative angle between the recoil axis of the molecular breakup and the polarization vector of the ionizing field, are also presented to provide insight on both the photoionization and photodissociation mechanisms for the different dication states