467 research outputs found

    The Ongoing WTO Negotiations on Agriculture: Issues and Options for Bangladesh

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    The negotiation on Agriculture is one of the vital components of WTO negotiation process which involved interests of the LDCs, including Bangladesh. The paper identified the interests of Bangladesh. The objective is to stimulate a discussion in turn assisting those responsible for decisions about Bangladesh’s evolving negotiating positions and strategy.WTO, Agriculture, Bangladesh

    A method for developing in-silico protein homologs

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    Computational methods for identifying and screening the most promising drug receptor candidates in the human genome are of great interest to drug discovery researchers. Successful methods will accurately identify and narrow the field of potential drug receptor candidates. This study details one such method. The method described here begins with the assumption that novel drug receptors have high sequence similarity to established drug receptors. The similarity search program FASTA3 aligns translated sequences of the human genome to known drug receptor sequences and ranks these alignments by measuring their statistical significance. Query results returned by FASTA3 are assembled into in-silico proteins or artificially generated homologs of known drug receptors. A second similarity search program, BLASTP, aligns in-silico proteins with a protein database, and also ranks alignments based on statistical significance. A potentially valuable in-silico protein identifies its generating drug receptor as the top-ranking result returned from the BLASTP search, and may represent a new family member of a particular group of drug receptors

    Evaluation of Antiviral Agents in Two Mouse Models of RNA Virus Infections

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    The first model we are evaluating is human influenza virus in mice. Influenza virus is a negative sense RNA virus, which the CDC estimates causes between 9.2 million and 35.6 million illnesses each year in the United States.[1] In the current influenza season, H3N2 viruses have been the predominant subclade of influenza A virus in circulation.[2] Development of a mouse model for influenza H3N2 virus infection has been difficult. In these studies, we endeavored to mouse-adapt influenza A/Hong Kong/4801/2014 H3N2 virus by serial passaging in AG129 mice. This virus strain was chosen as it overlaps in serotype with the current influenza H3N2 virus in circulation.[2] Initial passaging was unsuccessful, with no detectable increase in virus titer. However, when we used Mannan, an innate immune suppressant, as an aid in adapting the virus to mice, we observed an increase in virus titers in the lung between passage 1 to passage 3. The second model we are evaluating is mouse Norovirus as a model for Human Norovirus infections. Human Norovirus is a positive sense RNA virus responsible for approximately 685 million cases every year across the world.[3] Therefore identification of antiviral agents for treatment of human norovirus is a priority. We screened potential antiviral compounds in vitro utilizing a mouse macrophage cell line. rupintrivir, favipiravir, carbodine, and anicomycin were all observed to have antiviral effects in vitro. In vivo screening of carbodine will be completed in the mouse model as there is no human norovirus model in vivo

    An Epistemic Epidemic: The Role of Risk in the Crisis of Scientific Authority

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    Senior Project submitted to The Division of Social Studies of Bard College

    Nine quick tips for efficient bioinformatics curriculum development and training.

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    Biomedical research is becoming increasingly data driven. New technologies that generate large-scale, complex data are continually emerging and evolving. As a result, there is a concurrent need for training researchers to use and understand new computational tools. Here we describe an efficient and effective approach to developing curriculum materials that can be deployed in a research environment to meet this need
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