Ultrafast far-infrared optics of carbon nanotubes

The optical properties of single-wall carbon nanotube sheets in the far-infrared (FIR) spectral range from few THz to several tens of THz have been investigated with terahertz spectroscopy both with static measurements elucidating the absorption mechanism in the FIR and with time-resolved experiments yielding information on the charge carrier dynamics after optical excitation of the nanotubes. We observe an overall depletion of the dominating broad absorption peak at around 4THz when the nanotubes are excited by a short visible laser pulse. This finding excludes particle-plasmon resonances as absorption mechanism and instead shows that interband transitions in tubes with an energy gap of ~10meV govern the far-infrared conductivity. A simple model based on an ensemble of two-level systems naturally explains the weak temperature dependence of the far-infrared conductivity by the tube-to-tube variation of the chemical potential. Furthermore, the time-resolved measurements do not show any evidence of a distinct free-carrier response which is attributed to the photogeneration of strongly bound excitons in the tubes with large energy gaps. The rapid decay of a featureless background with pronounced dichroism is associated with the increased absorption of spatially localized charge carriers before thermalization is completed

Temperature dependence of ultrafast phonon dynamics in graphite

Nonequilibrium optical phonons are generated in graphite following the excitation of electron-hole pairs with a femtosecond laser pulse. Their energy relaxation is probed by means of terahertz pulses. We find that the hot-phonon lifetime increases by a factor of 2 when the sample temperature decreases from 300 to 5 K. These results suggest that the energy relaxation in graphite at room temperature and above is dominated by the anharmonic decay of hot A′1phonons at the K point into acoustic phonons with energies of about 10 meV

Multi-angle pulse shape detection of scattered light in flow cytometry for label-free cell cycle classification

Flow cytometers are robust and ubiquitous tools of biomedical research, as they enable high- throughput fluorescence-based multi-parametric analysis and sorting of single cells. How- ever, analysis is often constrained by the availability of detection reagents or functional changes of cells caused by fluorescent staining. Here, we introduce MAPS-FC (multi-angle pulse shape flow cytometry), an approach that measures angle- and time-resolved scattered light for high-throughput cell characterization to circumvent the constraints of conventional flow cytometry. In order to derive cell-specific properties from the acquired pulse shapes, we developed a data analysis procedure based on wavelet transform and k-means clustering. We analyzed cell cycle stages of Jurkat and HEK293 cells by MAPS-FC and were able to assign cells to the G1, S, and G2/M phases without the need for fluorescent labeling. The results were validated by DNA staining and by sorting and re-analysis of isolated G1, S, and G2/M populations. Our results demonstrate that MAPS-FC can be used to determine cell properties that are otherwise only accessible by invasive labeling. This approach is technically com- patible with conventional flow cytometers and paves the way for label-free cell sorting

Time of flight photoelectron momentum microscopy with 80 500 MHz photon sources electron optical pulse picker or bandpass pre filter

The small time gaps of synchrotron radiation in conventional multi bunch mode 100 500 MHz or laser based sources with high pulse rate 80 MHz are prohibitive for time of flight ToF based photoelectron spectroscopy. Detectors with time resolution in the 100 ps range yield only 20 100 resolved time slices within the small time gap. Here we present two techniques of implementing efficient ToF recording at sources with high repetition rate. A fast electron optical beam blanking unit with GHz bandwidth, integrated in a photoelectron momentum microscope, allows electron optical pulse picking with any desired repetition period. Aberration free momentum distributions have been recorded at reduced pulse periods of 5 MHz at MAX II and 1.25 MHz at BESSY II . The approach is compared with two alternative solutions a bandpass pre filter here a hemispherical analyzer or a parasitic four bunch island orbit pulse train, coexisting with the multi bunch pattern on the main orbit. Chopping in the time domain or bandpass pre selection in the energy domain can both enable efficient ToF spectroscopy and photoelectron momentum microscopy at 100 500 MHz synchrotrons, highly repetitive lasers or cavity enhanced high harmonic sources. The high photon flux of a UV laser 80 MHz, lt;1 meV bandwidth facilitates momentum microscopy with an energy resolution of 4.2 meV and an analyzed region of interest ROI down to lt;800 nm. In this novel approach to sub m ARPES the ROI is defined by a small field aperture in an intermediate Gaussian image, regardless of the size of the photon spo

Characterization of Profilin Polymorphism in Pollen with a Focus on Multifunctionality

Profilin, a multigene family involved in actin dynamics, is a multiple partners-interacting protein, as regard of the presence of at least of three binding domains encompassing actin, phosphoinositide lipids, and poly-L-proline interacting patches. In addition, pollen profilins are important allergens in several species like Olea europaea L. (Ole e 2), Betula pendula (Bet v 2), Phleum pratense (Phl p 12), Zea mays (Zea m 12) and Corylus avellana (Cor a 2). In spite of the biological and clinical importance of these molecules, variability in pollen profilin sequences has been poorly pointed out up until now. In this work, a relatively high number of pollen profilin sequences have been cloned, with the aim of carrying out an extensive characterization of their polymorphism among 24 olive cultivars and the above mentioned plant species. Our results indicate a high level of variability in the sequences analyzed. Quantitative intra-specific/varietal polymorphism was higher in comparison to inter-specific/cultivars comparisons. Multi-optional posttranslational modifications, e.g. phosphorylation sites, physicochemical properties, and partners-interacting functional residues have been shown to be affected by profilin polymorphism. As a result of this variability, profilins yielded a clear taxonomic separation between the five plant species. Profilin family multifunctionality might be inferred by natural variation through profilin isovariants generated among olive germplasm, as a result of polymorphism. The high variability might result in both differential profilin properties and differences in the regulation of the interaction with natural partners, affecting the mechanisms underlying the transmission of signals throughout signaling pathways in response to different stress environments. Moreover, elucidating the effect of profilin polymorphism in adaptive responses like actin dynamics, and cellular behavior, represents an exciting research goal for the future

An MBO scheme for minimizing the graph Ohta-Kawasaki functional

We study a graph based version of the Ohta-Kawasaki functional, which was originally introduced in a continuum setting to model pattern formation in diblock copolymer melts and has been studied extensively as a paradigmatic example of a variational model for pattern formation. Graph based problems inspired by partial differential equations (PDEs) and varational methods have been the subject of many recent papers in the mathematical literature, because of their applications in areas such as image processing and data classification. This paper extends the area of PDE inspired graph based problems to pattern forming models, while continuing in the tradition of recent papers in the field. We introduce a mass conserving Merriman-Bence-Osher (MBO) scheme for minimizing the graph Ohta-Kawasaki functional with a mass constraint. We present three main results: (1) the Lyapunov functionals associated with this MBO scheme Γ-converge to the Ohta-Kawasaki functional (which includes the standard graph based MBO scheme and total variation as a special case); (2) there is a class of graphs on which the Ohta-Kawasaki MBO scheme corresponds to a standard MBO scheme on a transformed graph and for which generalized comparison principles hold; (3) this MBO scheme allows for the numerical computation of (approximate) minimizers of the graph Ohta-Kawasaki functional with a mass constraint

Ultrafast dynamics of coherent optical phonons in α-quartz

Femtosecond laser excitation of alpha-quartz launches coherent optical phonons modulating the refractive index of the sample. The observed oscillations in the transmission and ellipticity of probe light decays due to phonon-phonon scattering. With decreasing temperature, the vibrations shift towards higher energies and are accompanied by a rise of the phonon lifetime caused by lattice stiffening and freezing of phonon modes, respectively