Grain setting defect1 (GSD1) function in rice depends on S-acylation and interacts with actin 1 (OsACT1) at its C-terminal

Grain setting defect1 (GSD1), a plant-specific remorin protein specifically localized at the plasma membrane and plasmodesmata of phloem companion cells, affects grain setting in rice through regulating the transport of photoassimilates. Here, we show new evidence demonstrating that GSD1 is localized at the cytoplasmic face of the plasma membrane and a stretch of 45 amino acid residues at its C-terminal is required for its localization. Association with the plasma membrane is mediated by S-acylation of cysteine residues Cys-524 and Cys-527, in a sequence of 45 amino acid residues essential for GSD1 function in rice. Furthermore, the coiled-coil domain in GSD1 is necessary for sufficient interaction with OsACT1. Together, these results reveal that GSD1 attaches to the plasma membrane through S-acylation and interacts with OsACT1 through its coiled-coil domain structure to regulate plasmodesmata conductance for photoassimilate transport in rice

Three-dimensional simulation of aggregate and asphalt mixture using parameterized shape and size gradation

Aggregate occupies at least three-quarters of the volume of asphalt mixture and can significantly affect the performance of pavement. The geometrical morphology influences the slippage and interlock among aggregates for resisting and distributing applied loads. In recent years, the discrete-element method (DEM) has been employed for simulation of asphalt mixture structure. This paper introduces an approach for simulation of aggregate and asphalt mixtures using parameterized shape and size gradation. Both the plane geometry factor (PGF) and the section aspect ratio (SAR) were employed to describe the three-dimensional (3D) geometric characteristics of aggregates. A numerical technique of aggregate models was implemented with probabilistic parameters depending on statistical results of PGFs and SARs. The 3D numerical model of asphalt mixtures was assembled with three different components, and was validated by uniaxial compression tests via comparison with the laboratory result. It was found that the PGF and SAR are appropriate to describe the three-dimensional features of aggregate shapes, because a simplified space object can be described by a two-dimensional (2D) graphical projection and a vector scalar corresponding to the space vector. Probability distribution curves of PGFs and SARs between coarse aggregates were in concordance with the Gauss-type function, because their correlation coefficients were all greater than 95%. It was verified that the developed clumping algorithm of aggregates was reasonable in terms of the shape and size gradation. Based on the parallel-bond model and Burger's model, the results of virtual tests were in good agreement with those of laboratory uniaxial tests. The angularity (PGF) of aggregates has a beneficial effect on the strength and stability of asphalt mixtures, whereas the flat-elongated feature (SAR) has a negative effect on the strength and stability of asphalt mixtures

Regulating Cytoplasmic Calcium Homeostasis Can Reduce Aluminum Toxicity in Yeast

Our previous study suggested that increased cytoplasmic calcium (Ca) signals may mediate aluminum (Al) toxicity in yeast (Saccharomyces cerevisiae). In this report, we found that a yeast mutant, pmc1, lacking the vacuolar calcium ion (Ca2+) pump Ca2+-ATPase (Pmc1p), was more sensitive to Al treatment than the wild-type strain. Overexpression of either PMC1 or an anti-apoptotic factor, such as Bcl-2, Ced-9 or PpBI-1, decreased cytoplasmic Ca2+ levels and rescued yeast from Al sensitivity in both the wild-type and pmc1 mutant. Moreover, pretreatment with the Ca2+ chelator BAPTA-AM sustained cytoplasmic Ca2+ at low levels in the presence of Al, effectively making the cells more tolerant to Al exposure. Quantitative RT-PCR revealed that the expression of calmodulin (CaM) and phospholipase C (PLC), which are in the Ca2+ signaling pathway, was down-regulated under Al stress. This effect was largely counteracted when cells overexpressed anti-apoptotic Ced-9 or were pretreated with BAPTA-AM. Taken together, our results suggest that the negative regulation of Al-induced cytoplasmic Ca signaling is a novel mechanism underlying internal resistance to Al toxicity

Molecular cloning and characterisation of scavenger receptor class B in pearl oyster Pinctada fuctada martensii

Background: Molluscs can accumulate carotenoids in their body tissues by predominantly feeding on aquatic plant sources. Carotenoid transport and absorption are determined by the regulation of various proteins such as Scavenger receptor class B(SR-BI). We report the identification and characterisation of pearl oyster Pinctada fuctada martensii SR-BI (PmSR-BI). The correlation between total carotenoid content (TCC) and gene expression was also estimated. Results: The full-length cDNA of PmSR-BI was 1828 bp, including an open-reading frame encoding of 1518 bpwith a pI value of 5.83. PmSR-BI protein contains a hydrophobic CD36 domain and four centrally clustered cysteine residues for the arrangement of disulphide bridges. The deduced amino acid sequence had an identity of 30% to 60% with the SR-B of other organisms. Reverse transcription polymerase chain reaction analysis showed that mRNA transcripts were expressed in multiple tissues of adult pearl oyster. A higher expression of PmSR-BI gene was observed in the hepatopancreas than in the adductor muscle, gill and mantle. The TCC and gene expression of PmSR-BI were significantly correlated (P < 0.05), with a correlation coefficient of 0.978. Conclusions: The results suggested that PmSR-BI is involved in the absorption of carotenoids in the pearl oyster P. fuctada martensii

Characterization of genome-wide H3K27ac profiles reveals a distinct PM2.5-associated histone modification signature

Complete list of differentially modified H3K27ac loci. (XLSX 69 kb

Conceptual design and progress of transmitting ∼\sim MV DC HV into 4 K LHe detectors

A dual-phase TPC (Time Projection Chamber) is more advanced in characterizing an event than a single-phase one because it can, in principle, reconstruct the 3D (X-Y-Z) image of the event, while a single-phase detector can only show a 2D (X-Y) picture. As a result, more enriched physics is expected for a dual-phase detector than a single-phase one. However, to build such a detector, DC HV (High Voltage) must be delivered into the chamber (to have a static electric field), which is a challenging task, especially for an LHe detector due to the extremely low temperature, $\sim$ 4 K, and the very high voltage, $\sim$ MV (Million Volts). This article introduces a convincing design for transmitting $\sim$ MV DC into a 4 K LHe detector. We also report the progress of manufacturing a 100 kV DC feedthrough capable of working at 4 K. Surprisingly, we realized that the technology we developed here might be a valuable reference to the scientists and engineers aiming to build residential bases on the Moon or Mars

Searching for ER and/or NR-like dark matter signals with the especially low background liquid helium TPCs

In the Dark Matter (DM) direct detection community, the absence of convincing signals has become a ``new normal'' for decades. Among other possibilities, the ``new normal'' might indicate that DM-matter interactions could generate not only the hypothetical NR (Nuclear Recoil) events but also the ER (Electron Recoil) ones, which have often been tagged as backgrounds historically. Further, we argue that ER and NR-like DM signals could co-exist in a DM detector's same dataset. So in total, there would be three scenarios we can search for DM signals: (i) ER excess only, (ii) NR excess only, and (iii) ER and NR excesses combined. To effectively identify any possible DM signal under the three scenarios, a DM detector should (a) have the minimum ER and NR backgrounds and (b) be capable of discriminating ER events from NR ones. Accordingly, we introduce the newly established project, ALETHEIA, which implements liquid helium-filled TPCs (Time Projection Chamber) in hunting for DM. Thanks to the nearly single-digit number of ER and NR backgrounds on 1 ton*yr exposure, presumably, the ALETHEIA detectors should be able to identify any form of DM-induced excess in its ROI (Research Of Interest). As far as we know, ALETHEIA is the first DM direct detection experiment claiming such an inclusive search; conventional detectors search DM mainly on the ``ER excess only'' and/or the ``NR excess only'' channel, not the ``ER and NR excesses combined'' channel. In addition, we introduce a preliminary scheme to one of the most challenging R\&D tasks, transmitting 500+ kV into a 4 K LHe detector

Radial Growth Response of Larix gmelinii to Climate along a Latitudinal Gradient in the Greater Khingan Mountains, Northeastern China

To explore how climatic factors influence tree growth within the context of global climate changes, we used a dendroclimatological analysis to understand the response of Larix gmelinii to climatic variations along a broad latitudinal gradient from 47.27 degrees to 52.66 degrees N in the Greater Khingan Mountains of Northeastern China. The growth-limiting climate factors and a detailed association between radial growth and climate were identified along the gradient using redundancy analysis (RDA) and standard correlation function analysis over the period 1960-2013. The results showed that temperatures during current June to July represented the most important factor affecting tree radial growth in the study area. Across all studied latitudes, Larix gmelinii growth might be decreasing in radial growth due to higher monthly maximum temperature (Tmax) and monthly mean temperatures (Tm) in the current June, especially for the stands at low and middle latitudes. With continued warming, Larix gmelinii radial growth at high latitudes (e.g., Mangui (MG) and Mohe (MH)) might be reduced by warmer temperatures in July. In addition, Larix gmelinii might be decreasing in radial growth from decreasing precipitation. Our results show that there is a decreasing trend in Larix gmelinii radial growth under the observed general increase of temperatures in the Greater Khingan Mountains in recent years.Peer reviewe