Exploring the Relationships Between Yield and Yield-Related Traits for Rice Varieties Released in China From 1978 to 2017

Despite evidence from previous case studies showing that agronomic traits partially determine the resulting yield of different rice (Oryza sativa L.) varieties, it remains unclear whether this is true at the ecotype level. Here, an extensive dataset of the traits of 7686 rice varieties, released in China from 1978 to 2017, was used to study the relationship between yield and other agronomic traits. We assessed the association between yield and other agronomic traits for four different rice ecotypes, i.e., indica inbred, indica hybrid, japonica inbred, and japonica hybrid. We found that associations between agronomic traits and yield were ecotype-dependent. For both the indica inbred and indica hybrid ecotypes, we found that greater values of certain traits, including the filled grain number per panicle, 1000-grain-weight, plant height, panicle length, grains per panicle, seed setting rate, long growth period, low panicle number per unit area, and low seed length/width ratio, have accounted for high grain yield. In the japonica inbred and japonica hybrid ecotypes, we found that only high panicle number per unit area and long growth period led to high grain yield. Indirectly, growth period consistently had a positive effect on yield in all ecotypes, and plant height had a positive effect on yield for the indicas and japonica inbred only. Plant height had a negative effect for the japonica hybrid. Altogether, our findings potentially have valuable implications for improving the breeds of rice ecotypes

Merging of Storm Time Midlatitude Traveling Ionospheric Disturbances and Equatorial Plasma Bubbles

Postsunset midlatitude traveling ionospheric disturbances (TIDs) and equatorial plasma bubbles (EPBs) were simultaneously observed over American sector during the geomagnetic storm on 8 September 2017. The characteristics of TIDs are analyzed by using a combination of the Millstone Hill incoherent scatter radar data and 2‐D detrended total electron content (TEC) from ground‐based Global Navigation Satellite System receivers. The main results associated with EPBs are as follows: (1) stream‐like structures of TEC depletion occurred simultaneously at geomagnetically conjugate points, (2) poleward extension of the TEC irregularities/depletions along the magnetic field lines, (3) severe equatorial and midlatitude electron density (Ne) bite outs observed by Defense Meteorological Satellite Program and Swarm satellites, and (4) enhancements of ionosphere F layer virtual height and vertical drifts observed by equatorial ionosondes near the EPBs initiation region. The stream‐like TEC depletions reached 46° magnetic latitudes that map to an apex altitude of 6,800 km over the magnetic equator using International Geomagnetic Reference Field. The formation of this extended density depletion structure is suggested to be due to the merging between the altitudinal/latitudinal extension of EPBs driven by strong prompt penetration electric field and midlatitude TIDs. Moreover, the poleward portion of the depletion/irregularity drifted westward and reached the equatorward boundary of the ionospheric main trough. This westward drift occurred at the same time as the sudden expansion of the convection pattern and could be attributed to the strong returning westward flow near the subauroral polarization stream region. Other possible mechanisms for the westward tilt are also discussed.Key PointsPostsunset EPBs driven by PPEF were observed to merge with midlatitude TIDs forming stream‐like depletion structures over American sectorDepletions reached 46 MLAT that map to 6,800 km over the equator and drifted westward reaching the equatorward boundary of the main troughStrong convection flow near SAPS region and disturbance thermospheric wind contributed to the westward drift of the midlatitude depletionsPeer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/148412/1/swe20807.pdfhttps://deepblue.lib.umich.edu/bitstream/2027.42/148412/2/swe20807_am.pd

Polymorphisms in Dopaminergic Genes in Schizophrenia and Their Implications in Motor Deficits and Antipsychotic Treatment

Dopaminergic system dysfunction is involved in schizophrenia (SCZ) pathogenesis and can mediate SCZ-related motor disorders. Recent studies have gradually revealed that SCZ susceptibility and the associated motor symptoms can be mediated by genetic factors, including dopaminergic genes. More importantly, polymorphisms in these genes are associated with both antipsychotic drug sensitivity and adverse effects. The study of genetic polymorphisms in the dopaminergic system may help to optimize individualized drug strategies for SCZ patients. This review summarizes the current progress about the involvement of the dopamine system in SCZ-associated motor disorders and the motor-related adverse effects after antipsychotic treatment, with a special focus on polymorphisms in dopaminergic genes. We hypothesize that the genetic profile of the dopaminergic system mediates both SCZ-associated motor deficits associated and antipsychotic drug-related adverse effects. The study of dopaminergic gene polymorphisms may help to predict drug efficacy and decrease adverse effects, thereby optimizing treatment strategies

Exogenous Nitrogen Addition Reduced the Temperature Sensitivity of Microbial Respiration without Altering the Microbial Community Composition

Atmospheric nitrogen (N) deposition is changing in both load quantity and chemical composition. The load effects have been studied extensively, whereas the composition effects remain poorly understood. We conducted a microcosm experiment to study how N chemistry affected the soil microbial community composition characterized by phospholipid fatty acids (PLFAs) and activity indicated by microbial CO2 release. Surface and subsurface soils collected from an old-growth subtropical forest were supplemented with three N-containing materials (ammonium, nitrate, and urea) at the current regional deposition load (50 kg ha-1 yr-1) and incubated at three temperatures (10, 20, and 30°C) to detect the interactive effects of N deposition and temperature. The results showed that the additions of N, regardless of form, did not alter the microbial PLFAs at any of the three temperatures. However, the addition of urea significantly stimulated soil CO2 release in the early incubation stage. Compared with the control, N addition consistently reduced the temperature dependency of microbial respiration, implying that N deposition could potentially weaken the positive feedback of the warming-stimulated soil CO2 release to the atmosphere. The consistent N effects for the surface and subsurface soils suggest that the effects of N on soil microbial communities may be independent of soil chemical contents and stoichiometry

Invasiveness of Pomacea canaliculata: the differences in life history traits of snail populations from invaded and native areas

Pomacea canaliculata is native to South America and has become a widely distributed agricultural and environmental pest in southern China. Previous studies have primarily focused on the tolerance of P. canaliculata to various environmental factors, and compared non-native invasive P. canaliculata with natives or non-invasive congeners. However, there has been no research concentrated on variation in innate growth and reproductive characteristics between P. canaliculata in its native and invaded areas. To address this gap, we conducted the first comparison experiment between P. canaliculata from their native area (Argentina) and from an invaded area (China). We recorded the temporal dynamics of shell height of male and female P. canaliculata, and investigated the sexual maturation and egg-related indicators in two populations from each country, rearing them under homogeneous temperature, photoperiod and food conditions. Our results showed that the shell growth rate of P. canaliculata in Argentina was significantly lower than that of P. canaliculata in China. Moreover, P. canaliculata exhibited stronger reproductive characteristics in populations from China, mainly reflected in the earlier sexual maturity, larger egg masses, higher hatching success, and a trend of shorter incubation period. These differences probably arose due to contemporary evolution in invaded areas under strong selective pressures in rice fields, and, together with more favorable climates, enable the snail populations to rapidly grow and expand in southern China.Fil: Zhang, Chunxia. South China Agricultural University; ChinaFil: Guo, Jing. South China Agricultural University; ChinaFil: Saveanu, Lucía. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Bahía Blanca. Instituto de Ciencias Biológicas y Biomédicas del Sur. Universidad Nacional del Sur. Departamento de Biología, Bioquímica y Farmacia. Instituto de Ciencias Biológicas y Biomédicas del Sur; Argentina. Universidad Nacional del Sur. Departamento de Biología, Bioquímica y Farmacia. Laboratorio de Ecología; ArgentinaFil: Martín, Pablo Rafael. Universidad Nacional del Sur. Departamento de Biología, Bioquímica y Farmacia. Laboratorio de Ecología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Bahía Blanca. Instituto de Ciencias Biológicas y Biomédicas del Sur. Universidad Nacional del Sur. Departamento de Biología, Bioquímica y Farmacia. Instituto de Ciencias Biológicas y Biomédicas del Sur; ArgentinaFil: Shi, Zhaoji. South China Agricultural University; ChinaFil: Zhang, Jiaen. South China Agricultural University; Chin

Research Progress on Soil Seed Bank: A Bibliometrics Analysis

The soil seed bank (SSB) is a natural bank of viable seeds in the soil or on its surface. Researches on SSB have accumulated extensively worldwide, but have seldom been visualized and quantitatively analyzed. In this paper, publications related to SSB from 1900 to 2019 were collected from the Web of Science Core Collection database, and reviewed and analyzed using CiteSpace. Annual publications distribution, co-occurrence analysis, collaboration network analysis, co-citation analysis and burst detection were all conducted. The results showed that (1) the number of SSB publications had increased rapidly and is still a hotspot; (2) SSB study is an interdisciplinary field mainly concentrated in ecology, environmental science, and plant science; (3) close research cooperation occurred among European countries which were more influential, whereas the USA was the most active country; (4) soil seed genetic diversity, seed persistence, seed trait, restoration potential and restoration projects, and spatial and temporal variation were the main research areas. (5) R language and linear mixed effects models are currently popular in SSB research. Invasive species, weed control, restoration potential and restoration projects, seed traits (especially seed longevity and dormancy), and SSB responses to environment changes (especially climate change and fire) are newly emerging trends in the research

Nitrogen and Sulfur Additions Improved the Diversity of nirK- and nirS-Type Denitrifying Bacterial Communities of Farmland Soil

Anthropogenic nitrogen (N) and sulfur (S) deposition can change above- and belowground biodiversity, including soil microbial diversity. The diversity of denitrifying microorganisms is of great significance to the calculation of the global nitrogen cycle and nitrogen flux. For a long time, nirK and nirS have been used as the functional genes to study denitrifying microorganisms, and have gradually become molecular markers for studying the composition and diversity of denitrifying bacteria. Here, three-time exposures to N and S applications (7, 30, and 60 days), were independently established. Additionally, the abundance, diversity, and structure of nirK- and nirS-type denitrifying communities were examined by sequencing analyses in response to three treatments, namely, N and S (TN/S), sodium chloride (TNaCl) and deionized water (pH = 7.0) (CK). Our results suggest that TN/S led to higher electrical conductivity (EC), total nitrogen (TN), total organic carbon (TOC), nitrate nitrogen (NO3−-N), ammonium nitrogen (NH4+-N), and lower pH compared with TNaCl and CK, which affected the diversity of nirK- and nirS-type denitrifying bacterial communities. We also observed that the nirK-type denitrifying community demonstrated a higher sensitivity to N and S additions. Overall, our results are important for the understanding of nitrogen in soil and N2O emissions

Data Integration Analysis Indicates That Soil Texture and pH Greatly Influence the Acid Buffering Capacity of Global Surface Soils

Soil acidification is a global environmental issue that decreases soil functions, and it has been significantly accelerated by anthropogenic activities in recent decades. Soils can resist acidification upon receiving acid inputs due to the resistance or/and resilience capacity of soils, which is termed the acid buffering capacity of soils, and it is often indicated by the soil pH buffering capacity (pHBC). An increasing number of studies have been conducted to quantify soil pHBC at various sites, but to date, integration of global data is lacking; therefore, the variations in large-scale soil pHBC and the factors that influence these variations are still unclear. In this study, we collected previously published data on soil pHBC to analyze its variations on a large scale, as well as investigate the underlying factors influencing these variations. The results showed that soil pHBC varied substantially from site to site, with a mean of 51.07 ± 50.11 mmol kg−1 pH−1. Soil texture and pH, separately or collectively, explained a considerable proportion of the total variation of global soil pHBC. It is well-established that a series of processes contribute to the soil acid buffering capacity in different pH ranges, and the global data analyses showed that pH 5.5 could be a key threshold value; different buffering systems may be active at pH > 5.5 and pH < 5.5. Moreover, tropical soils were more acid-sensitive than temperate and subtropical soils, and forest soils had significantly lower soil pHBCs than grassland and cropland soils. This could be attributed in part to the different soil properties, such as soil texture or pH, among the different climatic zones and ecosystems

Predation risk affects growth and reproduction of an invasive snail and its lethal effect depends on prey size

The behavior of invasive species under predation risk has been studied extensively, but their growth and reproductive responses have rarely been investigated. We conducted experiments with juveniles and adults of the invasive freshwater snail Pomacea canaliculata, and we observed changes in growth and reproduction in response to predation risk from a caged predator (Trachemys scripta elegans). P. canaliculata produced eggs earlier in the presence of predators and injured conspecifics compared with the control group (no risk), although the total number of egg masses laid by per female was exceeded by that of the controls after 15 days. Egg hatching success noticeably decreased under predation risk, and the incubation period was significantly prolonged; however, the oviposition height of the snails was not affected. A lethal effect of predation risk was detected in juvenile snails but not in adults. The growth of juvenile P. canaliculata was inhibited under predation risk, probably due to a reduction in food intake. Adult females exhibited a greater reduction in growth under predation risk than males, which likely resulted in part from the high reproductive investment of females in egg laying. These results indicate that P. canaliculata snails under predation risk face a trade-off between predator avoidance and growth and reproduction, where the lethal effect of predation risk is linked to the size of the prey.Fil: Guo, Jing. South China Agricultural University; ChinaFil: Martín, Pablo Rafael. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Bahía Blanca. Instituto de Ciencias Biológicas y Biomédicas del Sur. Universidad Nacional del Sur. Departamento de Biología, Bioquímica y Farmacia. Instituto de Ciencias Biológicas y Biomédicas del Sur; Argentina. Universidad Nacional del Sur. Departamento de Biología, Bioquímica y Farmacia. Laboratorio de Ecología; ArgentinaFil: Zhang, Chunxia. South China Agricultural University; ChinaFil: Zhang, Jiaen. South China Agricultural University; China. Ministry of Agriculture. Key Laboratory of Agro-Environment in the Tropics; China. Guangdong Engineering Research Center for Modern Eco-agriculture and Circular Agriculture; Chin