Surface constraints on the depth of the Atlantic meridional overturning circulation: Southern Ocean versus North Atlantic

Paleoclimate proxy evidence suggests that the Atlantic meridional overturning circulation (AMOC) was about 1000 m shallower at the Last Glacial Maximum (LGM) compared to the present. Yet it remains unresolved what caused this glacial shoaling of the AMOC, and many climate models instead simulate a deeper AMOC under LGM forcing. While some studies suggest that Southern Ocean surface buoyancy forcing controls the AMOC depth, others have suggested alternatively that North Atlantic surface forcing or interior diabatic mixing plays the dominant role. To investigate the key processes that set the AMOC depth, here we carry out a number of MITgcm ocean-only simulations with surface forcing fields specified from the simulation results of three coupled climate models that span much of the range of glacial AMOC depth changes in phase 3 of the Paleoclimate Model Intercomparison Project (PMIP3). We find that the MITgcm simulations successfully reproduce the changes in AMOC depth between glacial and modern conditions simulated in these three PMIP3 models. By varying the restoring time scale in the surface forcing, we show that the AMOC depth is more strongly constrained by the surface density field than the surface buoyancy flux field. Based on these results, we propose a mechanism by which the surface density fields in the high latitudes of both hemispheres are connected to the AMOC depth. We illustrate the mechanism using MITgcm simulations with idealized surface forcing perturbations as well as an idealized conceptual geometric model. These results suggest that the AMOC depth is largely determined by the surface density fields in both the North Atlantic and the Southern Ocean

Evaluation of ultrasonography for measurement of skin thickness in Shar-Peis

Objective-To determine whether high-frequency diagnostic ultrasonography is useful for assessment of skin thickness in Shar-Peis. Animals-10 healthy Shar-Peis and 10 healthy Beagles used as controls. Procedures-Ultrasonographic examination of the skin was performed on 4 cutaneous sites by use of a 13-MHz linear-array transducer, and the mean of 3 measurements was calculated. Ultrasonography results were compared with histologic findings of skin specimens stained with H&E, Alcian blue at a pH of 2.5, and Masson trichrome stains, with histometric measurements of skin thickness made by use of a microscope, and with measurements of skin thickness made by use of a plicometer. Ultrasonograpy results were also compared via age and sex of selected animals

Quantum control theory for coupled 2-electron dynamics in quantum dots

We investigate optimal control strategies for state to state transitions in a model of a quantum dot molecule containing two active strongly interacting electrons. The Schrodinger equation is solved nonperturbatively in conjunction with several quantum control strategies. This results in optimized electric pulses in the THz regime which can populate combinations of states with very short transition times. The speedup compared to intuitively constructed pulses is an order of magnitude. We furthermore make use of optimized pulse control in the simulation of an experimental preparation of the molecular quantum dot system. It is shown that exclusive population of certain excited states leads to a complete suppression of spin dephasing, as was indicated in Nepstad et al. [Phys. Rev. B 77, 125315 (2008)].Comment: 24 pages, 9 figure

p53 mutations in L3-loop zinc-binding domain, DNA-ploidy, and S phase fraction are independent prognostic indicators in colorectal cancer: A prospective study with a five-year follow-up

p53 gene alterations are among the most common events observed in colorectal cancer, and are accompanied frequently by DNA aneuploidy and high proliferative activity. The prognostic significance of such mutations remains controversial. We prospectively evaluated the prognostic significance of p53 mutations, DNA-ploidy, and S phase fraction (SPF) in a consecutive series of 160 colorectal cancer patients (median follow-up 71 months). Tumor DNA was screened for p53 mutations by PCR/single-strand conformational polymorphism/sequencing. DNA-ploidy and SPF were assessed by DNA flow cytometry. p53 mutations were detected in 68 of 160 (42.5%) cases. In 56% (38 of 68) of these, p53 mutations were found in conserved areas of the gene and in 44% (30 of 68 cases) outside the conserved regions. Eighteen of the 68 cases (26%) had mutations in the L3 loop, 11 of 68 (16%) in the L1 loop-sheet-\u3b1 helix motif, and 39 of 68 (58%) outside L3 and loop-sheet-\u3b1 helix. Seventy-five percent of the cases (120 of 160) showed DNA aneuploidy, whereas 18% of these (22 of 120) were multiclonal. The major independent predictors for both disease relapse and death were advanced Dukes' stage, p53 mutations affecting L3 loop, DNA-aneuploid tumors, and high SPF (>18.5%). Our results show that mutations in L3 functional domain, more than any mutations, are important biological indicators to predict the outcome of patients indicating that these mutations have biological relevance in terms of colorectal cancer disease course

SULT1A1gene deletion inBRCA2-associated male breast cancer: a link between genes and environmental exposures?

SULT1A1, a member of sulfotransferase superfamily, is a drug and hormone metabolizing enzyme involved in the metabolism of a variety of potential mammary carcinogens of endogenous and exogenous origin. Interestingly, the metabolic activity of SULT1A1 can be affected by varia- tions in gene copy number. Male Breast Cancer (MBC) is a rare disease and less investigated disease compared to female BC (FBC). As in FBC, the concurrent effects of genetic risk factors, particularly BRCA2 mutations, increased exposure to estrogens and environmental carcinogens play a relevant role in MBC. By quantitative real-time PCR with TaqMan probes, we investigated the presence of SULT1A1 gene copy number variations (CNVs) in a series of 72 MBCs. SULT1A1 gene deletion was observed in 10 of the 72 MBCs (13.9%). In a multivariate analysis associ- ation between BRCA2 mutation and SULT1A1 gene deletion emerged (p = 0.0005). Based on the evidence that the level of SULT1A1 enzyme activity is correlated with CNV, our data suggest that in male breast tumors SULT1A1 activity may be decreased. Thus, it can be hypothesized that in a proportion of MBCs, particularly in BRCA2-associated MBCs, the level of estrogens and environmental carcinogens exposure might be increased suggesting a link between gene and environmental exposure in the pathogenesis of MBC

BRCA1/BRCA2 rearrangements and CHEK2 common mutations are infrequent in Italian male breast cancer cases.

Male breast cancer (MBC) is a rare and poorly known disease. Germ-line mutations of BRCA2 and, to lesser extent, BRCA1 genes are the highest risk factors associated with MBC. Interestingly, BRCA2 germ-line rearrangements have been described in high-risk breast/ovarian cancer families which included at least one MBC case. Germ-line mutations of CHEK2 gene have been also implicated in inherited MBC predisposition. The CHEK2 1100delC mutation has been shown to increase the risk of breast cancer in men lacking BRCA1/BRCA2 mutations. Intriguingly, two other CHEK2 mutations (IVS2+1G > A and I157T) and a CHEK2 large genomic deletion (del9-10) have been associated with an elevated risk for prostate cancer. Here, we investigated the contribution of BRCA1, BRCA2 and CHEK2 alterations to MBC predisposition in Italy by analysing a large series of MBC cases, unselected for breast cancer family history and all negative for BRCA1/BRCA2 germ-line mutations. A total of 102 unrelated Italian MBC cases were screened for deletions/duplications of BRCA1, BRCA2 and CHEK2 by multiplex ligation-dependent probe amplification. No BRCA1, BRCA2 and CHEK2 genomic rearrangements, including the CHEK2 del9-10, were found in the series analysed. Furthermore, none of the MBC cases and 263 male population controls, also included in this study, carried the CHEK2 1100delC, IVS2+1G > A and I157T common mutations. Overall, our data suggest that screening of BRCA1/2 rearrangements is not advantageous in MBC cases not belonging to high-risk breast cancer families and that common CHEK2 mutations play an irrelevant role in MBC predisposition in Italy

Propagating Disturbances in Coronal Loops: A Detailed Analysis of Propagation Speeds

Quasi-periodic disturbances have been observed in the outer solar atmosphere for many years now. Although first interpreted as upflows (Schrijver et al. (1999)), they have been widely regarded as slow magnetoacoustic waves, due to observed velocities and periods. However, recent observations have questioned this interpretation, as periodic disturbances in Doppler velocity, line width and profile asymmetry were found to be in phase with the intensity oscillations (De Pontieu et al. (2010),Tian1 et al. (2011))}, suggesting the disturbances could be quasi-periodic upflows. Here we conduct a detailed analysis of the velocities of these disturbances across several wavelengths using the Atmospheric Imaging Assembly (AIA) on board the Solar Dynamics Observatory (SDO). We analysed 41 examples, including both sunspot and non sunspot regions of the Sun. We found that the velocities of propagating disturbances (PDs) located at sunspots are more likely to be temperature dependent, whereas the velocities of PDs at non sunspot locations do not show a clear temperature dependence. We also considered on what scale the underlying driver is affecting the properties of the PDs. Finally, we found that removing the contribution due to the cooler ions in the 193 A wavelength suggests that a substantial part of the 193 emission of sunspot PDs can be contributed to the cool component of 193\AA.Comment: 26 Papges, 15 Figure