Unsaturated zone travel time to groundwater on a vulnerable site

peer-reviewedThis is an electronic version of an article published in Irish Geography, 2005, vol.38(1), pp57-71. Irish Geography is available online at: http://www.tandfonline.com/doi/pdf/10.1080/00750770509555849. For the avoidance of doubt, ‘your version’ is the author version and not the publisher-created PDF, HTML or XML version posted as the definitive, final version of scientific record.A bromide (Br) tracing experiment was conducted to ascertain unsaturated zone travel time to groundwater on a site with a karstified limestone aquifer overlain by a thin free-draining overburden. Br tracer was applied to areas surrounding two boreholes; soil solution and groundwater Br concentrations were monitored. Bromide was first detected after eight and 34 days in the soil solution and groundwater. The quick break-through of the applied Br in the soil solution and groundwater indicates the presence of preferential flow in the soil at this site. The time to maximum groundwater Br concentration supports a dominant matrix flow path through the overburden and then preferential flow through the unsaturated limestone bedrock. The results indicated that the transport of conservative contaminants, such as nitrate, can be expected to occur in a single recharge season. The occurrence of preferential flow raises concerns over rapid transport of non-conservative contaminants such as faecal coliforms and this merits further investigation

Physiological and biochemical controls over methyl halide emissions from rice plants

This paper investigates physiological and biochemical aspects of methyl halide production in rice plants over two growing seasons. Multiple separate mechanisms appear to be responsible for production of methyl halides in rice plant tissues. Evidence for multiple mechanisms is found in timing of peak emissions of methyl halides from rice, inconsistent effects of competitive inhibitors on methyl halide emissions, and large differences in methyl halide emission rates when compared to plant tissue halide concentrations. Other results show that chloride, bromide, and iodide ion concentrations in plant tissue appear to be regulated throughout the season, and observed changes in leaf tissue concentration cannot explain observed methyl halide emissions. The Km for methyl iodide formation in leaf tissue cell-free extract is 0.018 mM, suggesting a very efficient mechanism. Of the seven competitive inhibitors used, only thiol had a consistently strong effect on both methyl iodide and methyl bromide. Copyright 2004 by the American Geophysical Union

Sensing Tissue Damage by Myeloid C-Type Lectin Receptors

After both sterile and infectious insults, damage is inflicted on tissues leading to accidental or programmed cell death. In addition, events of programmed cell death also take place under homeostatic conditions, such as in embryo development or in the turnover of hematopoietic cells. Mammalian tissues are seeded with myeloid immune cells, which harbor a plethora of receptors that allow the detection of cell death, modulating immune responses. The myeloid C-type lectin receptors (CLRs) are one of the most prominent families of receptors involved in tailoring immunity after sensing dead cells. In this chapter, we will cover a diversity of signals arising from different forms of cell death and how they are recognized by myeloid CLRs. We will also explore how myeloid cells develop their sentinel function, exploring how some of these CLRs identify cell death and the type of responses triggered thereof. In particular, we will focus on DNGR-1 (CLEC9A), Mincle (CLEC4E), CLL-1 (CLEC12A), LOX-1 (OLR1), CD301 (CLEC10A) and DEC-205 (LY75) as paradigmatic death-sensing CLRs expressed by myeloid cells. The molecular processes triggered after cell death recognition by myeloid CLRs contribute to the regulation of immune responses in pathologies associated with tissue damage, such as infection, autoimmunity and cancer. A better understanding of these processes may help to improve the current approaches for therapeutic intervention.Carlos Del Fresno is supported by AECC Foundation (INVES192DELF). Francisco Javier Cueto is the recipient of a Ph.D. “La Caixa” fellowship (LCF/BQ/ES14/10320011). Work in the DS laboratory is funded by the CNIC; by the European Research Council (ERC-2016-Consolidator Grant 725091); by the European Commission (635122-PROCROP H2020); by Ministerio de Ciencia, Innovación e Universidades (MICINN), Agencia Estatal de Investigación and Fondo Europeo de Desarrollo Regional (FEDER) (SAF2016-79040-R); by Comunidad de Madrid (B2017/BMD-3733 Immunothercan-CM); by FIS-Instituto de Salud Carlos III, MICINN and FEDER (RD16/0015/0018-REEM); by Acteria Foundation; by Atresmedia (Constantes y Vitales prize) and by Fundació La Marató de TV3 (201723). The CNIC is supported by the Instituto de Salud Carlos III (ISCIII), the MICINN and the Pro-CNIC Foundation and is a Severo Ochoa Center of Excellence (SEV-2015-0505).S