Optics of heterotrophic nanoflagellates and ciliates: A tentative assessment of their scattering role in oceanic waters compared to those of bacterial and algal cells

Heterotrophic nanoflagellates and naked ciliates have been isolated from open sea waters and separately grown by using free living marine bacteria as food. The modal diameters of purified (by differential screening) populations are about 3 and 12.5 μm, respectively. The spectral determination of their absorption and scattering properties have been carried out. By combining these values with the cell number density and size distribution function, simultaneously measured, the efficiency factors for absorption and scattering at the level of individual cells can be derived. From these factors and by using the anomalous diffraction theory, the relative index of refraction can be derived (at least for flagellates); it agrees with the predictions made from the intracellular carbon concentrations (mean value 129 kgC m–3). In addition, backscattering efficiency (not determined) is computed through Mie theory. Like bacteria, these larger protists exhibit the typical absorption maximum of cytochrome (at about 410–415 nm). The impact of these organisms upon the properties of oceanic waters is compared to that of the bacterial compartment, in terms of scattering and backscattering coefficients. For that, the bacterial number-to-chlorophyll concentration relationship, as proposed by Cole et al. (1988), is adopted and reasonable assumptions resting on field data are made concerning the respective biomasses of bacterioplankton and heterotrophic nanoplankton. An assessment of the comparative role of the phototrophic and heterotrophic communities is also attempted. Algal cells in open ocean, and to a lesser extent small heterotrophs, dominate the scattering coefficients; the sum of their contributions is close to the coefficient measured in various (from oligotrophic to eutrophic) waters. On the contrary, these organisms are definitely insignificant contributors to the backscattering coefficient. In the backscattering process, heterotrophic bacteria are the more efficient agents; they, however, account only for a small part of the coefficient as actually derived from measurements at sea. The main contributors would presumably be the abundant population of very tiny, poorly known particles with size similar to, or below that of commonly identified bacteria. This partly speculative conclusion, based on theoretical considerations, is supported by recent studies demonstrating the importance of submicrometer detrital particles

Prochlorococcus and Synechococcus: A comparative study of their optical properties in relation to their size and pigmentation

Three unialgal strains of Prochlorococcus and four of Synechococcus were grown in batch culture at low irradiances. The spectral values of light absorption, scattering and backscattering of intact cells in suspension were determined, together with cell counts, size distribution and pigment composition (via HPLC). The spectral efficiency factors Qa, Qb, Qbb for light absorption, scattering and backscattering respectively, were derived, as well as the corresponding chlorophyll-specific coefficients a*, b* and bb*. The pigment used when normalizing is “true” chlorophyll a for Synechococcus, and divinyl-chlorophyll a for Prochlorococcus. In correspondence with small sizes (0.6 μm, on average) Prochlorococcus exhibits Qb values below those of Synechococcus (size about 0.9 μm, on average). In contrast, Qa is higher for Prochlorococcus than for Synechococcus, in response to high internal divinyl-chlorophyll content. In the blue part of the spectrum the probability for photons of being absorbed by a Prochlorococcus cell exceeds that of being scattered. Such a combination has never been found before for other algal cells, consistently more efficient as scatterers than as absorbers. The magnitude of the three efficiency Q-factors, as well as their spectral variations, can be understood and reconstructed in the frame of the Mie theory. The impact of these small organisms, dominant in oligotrophic environment, upon the optical properties of such waters are discussed on the basis of their chlorophyll-specific optical coefficients. Their absorption capabilities (per unit of chlorophyll) are not far from being maximum, to the extent that the package effect is rather reduced. With respect to scattering, Prochlorococcus cells have a minute signature compared to that of Synechococcus. This point is illustrated using vertical profiles of fluorescence, attenuation coefficient, cell number, Chl a and divinyl-Chl a concentrations, as observed in an oligotrophic tropical situation. Even if the backscattering-to-scattering ratio is, as theoretically expected, higher for Prochlorococcus than for all other algae (including Synechococcus), their light backscattering capacity definitely remains negligible

Design of a robust modem for power line communications

We design a power line communication (PLC) modem robust to frequency-selective and timevarying channel condition. We consider the use of an adaptive CPFSK modulation scheme at a transmission rate of up to 2Mbps and TDMA scheme for multiple access. We propose a synchronization scheme for robust and fast frame synchronization and the channel change detector for adaptive modulation. The performance of the designed modem is verified by computer simulation. Numerical results show that the use of the proposed modem can transmit data without interruption even in the case of sudden change of the channel condition

Genome-wide expression patterns associated with oncogenesis and sarcomatous transdifferentation of cholangiocarcinoma

BACKGROUND: The molecular mechanisms of CC (cholangiocarcinoma) oncogenesis and progression are poorly understood. This study aimed to determine the genome-wide expression of genes related to CC oncogenesis and sarcomatous transdifferentiation. METHODS: Genes that were differentially expressed between CC cell lines or tissues and cultured normal biliary epithelial (NBE) cells were identified using DNA microarray technology. Expressions were validated in human CC tissues and cells. RESULTS: Using unsupervised hierarchical clustering analysis of the cell line and tissue samples, we identified a set of 342 commonly regulated (>2-fold change) genes. Of these, 53, including tumor-related genes, were upregulated, and 289, including tumor suppressor genes, were downregulated (<0.5 fold change). Expression of SPP1, EFNB2, E2F2, IRX3, PTTG1, PPARγ, KRT17, UCHL1, IGFBP7 and SPARC proteins was immunohistochemically verified in human and hamster CC tissues. Additional unsupervised hierarchical clustering analysis of sarcomatoid CC cells compared to three adenocarcinomatous CC cell lines revealed 292 differentially upregulated genes (>4-fold change), and 267 differentially downregulated genes (<0.25 fold change). The expression of 12 proteins was validated in the CC cell lines by immunoblot analysis and immunohistochemical staining. Of the proteins analyzed, we found upregulation of the expression of the epithelial-mesenchymal transition (EMT)-related proteins VIM and TWIST1, and restoration of the methylation-silenced proteins LDHB, BNIP3, UCHL1, and NPTX2 during sarcomatoid transdifferentiation of CC. CONCLUSION: The deregulation of oncogenes, tumor suppressor genes, and methylation-related genes may be useful in identifying molecular targets for CC diagnosis and prognosis

Comparison of the Efficacy of Glimepiride, Metformin, and Rosiglitazone Monotherapy in Korean Drug-Naïve Type 2 Diabetic Patients: The Practical Evidence of Antidiabetic Monotherapy Study

BackgroundAlthough many anti-diabetic drugs have been used to control hyperglycemia for decades, the efficacy of commonly-used oral glucose-lowering agents in Korean type 2 diabetic patients has yet to be clearly demonstrated.MethodsWe evaluated the efficacy of glimepiride, metformin, and rosiglitazone as initial treatment for drug-naïve type 2 diabetes mellitus patients in a 48-week, double-blind, randomized controlled study that included 349 Korean patients. Our primary goal was to determine the change in HbA1c levels from baseline to end point. Our secondary goal was to evaluate changes in fasting plasma glucose (FPG) levels, body weight, frequency of adverse events, and the proportion of participants achieving target HbA1c levels.ResultsHbA1c levels decreased from 7.8% to 6.9% in the glimepiride group (P<0.001), from 7.9% to 7.0% in the metformin group (P<0.001), and from 7.8% to 7.0% (P<0.001) in the rosiglitazone group. Glimepiride and rosiglitazone significantly increased body weight and metformin reduced body weight during the study period. Symptomatic hypoglycemia was more frequent in the glimepiride group and diarrhea was more frequent in the metformin group.ConclusionThe efficacy of glimepiride, metformin, and rosiglitazone as antidiabetic monotherapies in drug-naïve Korean type 2 diabetic patients was similar in the three groups, with no statistical difference. This study is the first randomized controlled trial to evaluate the efficacy of commonly-used oral hypoglycemic agents in Korean type 2 diabetic patients. An additional subgroup analysis is recommended to obtain more detailed information

Clinical significance of insulin-like growth factor-1 receptor expression in stage I non-small-cell lung cancer: immunohistochemical analysis

BACKGROUND/AIMS: The insulin-like growth factor (IGF) system has been implicated in tumor growth, invasion, and metastasis. However, reports on the IGF-1 receptor (IGF-1R) based on radioimmunoassays are conflicting, and its prognostic implications in non-small-cell lung cancer (NSCLC) are still controversial. METHODS: Seventy-one paraffin-embedded tissue sections from stage I NSCLC patients were stained using a mouse monoclonal antibody against human IGF-1R. RESULTS: The intensity and frequency of IGF-1R expression on the membrane and cytoplasm of cancer cells was evaluated and scored using a semiquantitative system. IGF-1R expression was detected in nine of 71 (12.7%) cases. No significant relationship was found between clinical/histopathological parameters and IGF-1R expression. None of the patients whose tumor expressed IGF-1R had experienced distant metastasis or cancer-related death, although the difference did not reach statistical significance. CONCLUSIONS: We conclude that IGF-1R expression may not be a major prognostic factor for stage I NSCLC.ope

Netrin Inhibits Regenerative Axon Growth of Adult Dorsal Root Ganglion Neurons in Vitro

Netrin is a neuronal guidance molecule implicated in the development of spinal commissural neurons and cortical neurons. The attractive function of netrin requires the receptor, Deleted in Colorectal Cancer (DCC), while the receptor Unc5h is involved in the repulsive action of netrin during embryonic development. Although the expression of netrin and its receptor has been demonstrated in the adult nervous system, the function of netrin in adult neurons has not yet been elucidated. Here, we show that netrin treatment inhibited neurite outgrowth of adult dorsal root ganglion (DRG) neurons in explant and dissociated cultures. In addition, unc5h1-3 mRNAs, but not the dcc mRNA, are abundantly expressed in the adult DRG. An in situ hybridization study demonstrated that unc5h mRNAs were expressed in DRG neurons. This finding indicates that netrin/Unc5h signaling may play a role in the neurite outgrowth of adult DRG neurons and that netrin may be involved in the regulation of peripheral nerve regeneration

Selective ROCK2 inhibition in focal cerebral ischemia

Objective: Rho-associated kinase (ROCK) is a key regulator of numerous processes in multiple cell types relevant in stroke pathophysiology. ROCK inhibitors have improved outcome in experimental models of acute ischemic or hemorrhagic stroke. However, the relevant ROCK isoform (ROCK1 or ROCK2) in acute stroke is not known. Methods: We characterized the pharmacodynamic and pharmacokinetic profile, and tested the efficacy and safety of a novel selective ROCK2 inhibitor KD025 (formerly SLx-2119) in focal cerebral ischemia models in mice. Results: KD025 dose-dependently reduced infarct volume after transient middle cerebral artery occlusion. The therapeutic window was at least 3 h from stroke onset, and the efficacy was sustained for at least 4 weeks. KD025 was at least as efficacious in aged, diabetic or female mice, as in normal adult males. Concurrent treatment with atorvastatin was safe, but not additive or synergistic. KD025 was also safe in a permanent ischemia model, albeit with diminished efficacy. As one mechanism of protection, KD025 improved cortical perfusion in a distal middle cerebral artery occlusion model, implicating enhanced collateral flow. Unlike isoform-nonselective ROCK inhibitors, KD025 did not cause significant hypotension, a dose-limiting side effect in acute ischemic stroke. Interpretation Altogether, these data show that KD025 is efficacious and safe in acute focal cerebral ischemia in mice, implicating ROCK2 as the relevant isoform in acute ischemic stroke. Data suggest that selective ROCK2 inhibition has a favorable safety profile to facilitate clinical translation

Assessment of Deceased Donor Kidneys Using a Donor Scoring System

∙The authors have no financial conflicts of interest. Purpose: Marginal grafts should be used more actively in Asian countries where deceased donor transplantation is unpopular. We modified a quantitative donor scoring system proposed by Nyberg and his colleagues and developed a donor scoring system in order to assess the quality of deceased donor grafts and their prognostic value as an initial effort to promote usage of marginal donors. Materials and Methods: We retrospectively evaluated 337 patients. Results: A scoring system was derived from six donor variables [age, 0-25; renal function, 0-4; history of hypertension