Sequence variation and phylogenetic relationship analysis of starch branching enzyme I gene (SBEI) in rice varieties from China, Laos and Thailand

The coding sequence of starch branching enzyme I gene (SBEI) of 30 rice varieties from China, Laos and Thailand were cloned. All thirty sequences contain 2,463 bp and 14 exons and encode for 820 amino acids. Three sites of Single Nucleotide Polymorphisms (SNPs) A < C, T < C, and T < C were found at positions 1,107, 2,156 and 2,271 in Exon with 6, 13 and 14 respectively. The SNPs at position 1,107 A < C and position 2,271 T < C were silent mutations. The SNP at position 2,156 T < C was a missense mutation and induced a mutation from valine (GTG) to alanine (GCG). Three haplotypes A/T/T, C/T/C and C/C/C were observed. The phylogenetic analysis of 81 SBEI CDS sequences, out of which 30 are from this study and 51 are from previous, classifies them into 2 major groups using 4 sequences as outgroup. The group of monocot comprised of rice, barley, wheat, sorghum whereas maize and the group of dicot comprised of potato, cassava, poplar, Chinese chestnut, bean, legumes and apple. The group of rice SBEI CDS was a major clade in monocot group with high bootstrap value. SBEI gene of rice from China, Laos and Thailand, wheat, apple and poplar contain 14 exons while SBEI gene of rice from Japan and Korea contained only 12 exons. The GC content of SBEI gene of rice varieties was lower than that of wheat and apple but higher than that of poplar

Sorption of Eu(III) on Attapulgite Studied by Batch, XPS and EXAFS Techniques.

The effects of pH, ionic strength and temperature on sorption of Eu(III) on attapulgite were investigated in the presence and absence of fulvic acid (FA) and humic acid (HA). The results indicated that the sorption of Eu(III) on attapulgite was strongly dependent on pH and ionic strength, and independent of temperature. In the presence of FA/HA, Eu(III) sorption was enhanced at pH 7. The X-ray photoelectron spectroscopy (XPS) analysis suggested that the sorption of Eu(III) might be expressed as ≡X3Eu0 ≡SwOHEu3+ and ≡SOEu-OOC-/HA in the ternary Eu/HA/attapulgite system. The extended X-ray absorption fine structure (EXAFS) analysis of Eu-HA complexes indicated that the distances of d(Eu-O) decreased from 2.451 to 2.360 Å with increasing pH from 1.76 to 9.50, whereas the coordination number (N) decreased from ~9.94 to ~8.56. Different complexation species were also found for the different addition sequences of HA and Eu(III) to attapulgite suspension. The results are important to understand the influence of humic substances on Eu(III) behavior in the natural environment

Study of a cold spray nozzle throat on acceleration characteristics via CFD

Cold spray technology can obtain coatings in a solid state, suitable for deposition protection, repair, and additive manufacturing. In order to further expand the application areas of cold spraying nozzles, especially the inner surface of the components or areas where a Straight-line conical nozzle cannot be applied, because the study of the throat of the nozzle with the angle will directly reduce the total length of the nozzle (the horizontal direction), hence, the spray with the angle will show its advantage. This study discusses the influence of the throat structure of the conical cold spray nozzle on the acceleration characteristics, including the throat’s size, length, and angle. The results show the following. Firstly, under the premise of keeping the shrinkage ratio and divergence ratio unchanged at normal temperature, the throat diameter is between 2–6 mm in size, and the maximum growth rate exceeds 20 m/s. When the throat exceeds 6mm, the growth rate of the outlet slows down, and the growth rate is only 8 m/s. Secondly, the length of the throat has little effect on the acceleration characteristics, the total range fluctuated from 533 to 550 m/s, and 11 mm length of the throat is the closest to 0mm. Additionally, the 90° throat angle has the least effect on the acceleration characteristics. Finally, the particle trajectory is affected by inlet pressure, injection pressure, particle size, and other factors

Variational approximation for mixtures of linear mixed models

Mixtures of linear mixed models (MLMMs) are useful for clustering grouped data and can be estimated by likelihood maximization through the EM algorithm. The conventional approach to determining a suitable number of components is to compare different mixture models using penalized log-likelihood criteria such as BIC.We propose fitting MLMMs with variational methods which can perform parameter estimation and model selection simultaneously. A variational approximation is described where the variational lower bound and parameter updates are in closed form, allowing fast evaluation. A new variational greedy algorithm is developed for model selection and learning of the mixture components. This approach allows an automatic initialization of the algorithm and returns a plausible number of mixture components automatically. In cases of weak identifiability of certain model parameters, we use hierarchical centering to reparametrize the model and show empirically that there is a gain in efficiency by variational algorithms similar to that in MCMC algorithms. Related to this, we prove that the approximate rate of convergence of variational algorithms by Gaussian approximation is equal to that of the corresponding Gibbs sampler which suggests that reparametrizations can lead to improved convergence in variational algorithms as well.Comment: 36 pages, 5 figures, 2 tables, submitted to JCG

Nonradiative recombination - Critical in choosing quantum well number for InGaN/GaN light-emitting diodes

In this work, InGaN/GaN light-emitting diodes (LEDs) possessing varied quantum well (QW) numbers were systematically investigated both numerically and experimentally. The numerical computations show that with the increased QW number, a reduced electron leakage can be achieved and hence the efficiency droop can be reduced when a constant Shockley-Read-Hall (SRH) nonradiative recombination lifetime is used for all the samples. However, the experimental results indicate that, though the efficiency droop is suppressed, the LED optical power is first improved and then degraded with the increasing QW number. The analysis of the measured external quantum efficiency (EQE) with the increasing current revealed that an increasingly dominant SRH nonradiative recombination is induced with more epitaxial QWs, which can be related to the defect generation due to the strain relaxation, especially when the effective thickness exceeds the critical thickness. These observations were further supported by the carrier lifetime measurement using a pico-second time-resolved photoluminescence (TRPL) system, which allowed for a revised numerical modeling with the different SRH lifetimes considered. This work provides useful guidelines on choosing the critical QW number when designing LED structures. © 2014 Optical Society of America

Search for the Rare Decays J/Psi --> Ds- e+ nu_e, J/Psi --> D- e+ nu_e, and J/Psi --> D0bar e+ e-

We report on a search for the decays J/Psi --> Ds- e+ nu_e + c.c., J/Psi --> D- e+ nu_e + c.c., and J/Psi --> D0bar e+ e- + c.c. in a sample of 5.8 * 10^7 J/Psi events collected with the BESII detector at the BEPC. No excess of signal above background is observed, and 90% confidence level upper limits on the branching fractions are set: B(J/Psi --> Ds- e+ nu_e + c.c.)<4.8*10^-5, B(J/Psi --> D- e+ nu_e + c.c.) D0bar e+ e- + c.c.)<1.1*10^-5Comment: 10 pages, 4 figure

Study of J/psi decays to Lambda Lambdabar and Sigma0 Sigma0bar

The branching ratios and Angular distributions for J/psi decays to Lambda Lambdabar and Sigma0 Sigma0bar are measured using BESII 58 million J/psi.Comment: 11 pages, 5 figure

Measurement of \chi_cJ--> K+K-K+K-

Using 14M psi(2S) events taken with the BES-II detector, chi_cJ-->K+K-K+K- decays are studied. For the four-kaon final state, the branching fractions are B(chi_c0,1,2 -->K+K-K+K-)=(3.48\pm 0.23\pm 0.47)\times 10^{-3}, (0.70\pm 0.13\pm 0.10)\times 10^{-3}, and (2.17\pm 0.20\pm 0.31)\times 10^{-3}. For the \phi K+K- final state, the branching fractions, which are measured for the first time, are B(chi_c0,1,2-->\phi K+K-)=(1.03\pm 0.22\pm 0.15)\times 10^{-3}, (0.46\pm 0.16\pm 0.06)\times 10^{-3}, and (1.67\pm 0.26\pm 0.24)\times 10^{-4}. For the \phi\phi final state, B(chi_{c0,2}-->\phi\phi)=(0.94\pm 0.21\pm 0.13)\times 10^{-3} and (1.70\pm 0.30\pm 0.25)\times 10^{-3}.Comment: 7 pages, 7 figure

Partial wave analyses of J/psi to gamma pi^+ pi^- and gamma pi^0 pi^0

Results are presented on J/psi radiative decays to pi^+pi^- and pi^0pi^0 based on a sample of 58M J/psi events taken with the BESII detector. Partial wave analyses are carried out using the relativistic covariant tensor amplitude method in the 1.0 to 2.3 GeV/c^2 pipi mass range. There are conspicuous peaks due to the f_2(1270) and two 0^++ states in the 1.45 and 1.75 GeV/c^2 mass regions. The first 0^++ state has a mass of 1466\pm 6\pm 20 MeV/c^2, a width of 108^{+14}_{-11}\pm 25 MeV/c^2, and a branching fraction B(J/psi \to \gamma f_0(1500) \to\gamma \pi^+\pi^-) = (0.67\pm0.02\pm0.30) \times 10^{-4}. Spin 0 is strongly preferred over spin 2. The second 0^++ state peaks at 1765^{+4}_{-3}\pm 13 MeV/c^2 with a width of 145\pm8\pm69 MeV/c^2. If this 0^++ is interpreted as coming from f_0(1710), the ratio of its branching fractions to pipi and K\bar K is 0.41^{+0.11}_{-0.17}.Comment: 9 pages, 6 figure