XML for Domain Viewpoints

Within research institutions like CERN (European Organization for Nuclear Research) there are often disparate databases (different in format, type and structure) that users need to access in a domain-specific manner. Users may want to access a simple unit of information without having to understand detail of the underlying schema or they may want to access the same information from several different sources. It is neither desirable nor feasible to require users to have knowledge of these schemas. Instead it would be advantageous if a user could query these sources using his or her own domain models and abstractions of the data. This paper describes the basis of an XML (eXtended Markup Language) framework that provides this functionality and is currently being developed at CERN. The goal of the first prototype was to explore the possibilities of XML for data integration and model management. It shows how XML can be used to integrate data sources. The framework is not only applicable to CERN data sources but other environments too.Comment: 9 pages, 6 figures, conference report from SCI'2001 Multiconference on Systemics & Informatics, Florid

Database independent Migration of Objects into an Object-Relational Database

This paper reports on the CERN-based WISDOM project which is studying the serialisation and deserialisation of data to/from an object database (objectivity) and ORACLE 9i.Comment: 26 pages, 18 figures; CMS CERN Conference Report cr02_01

Mobile Computing in Physics Analysis - An Indicator for eScience

This paper presents the design and implementation of a Grid-enabled physics analysis environment for handheld and other resource-limited computing devices as one example of the use of mobile devices in eScience. Handheld devices offer great potential because they provide ubiquitous access to data and round-the-clock connectivity over wireless links. Our solution aims to provide users of handheld devices the capability to launch heavy computational tasks on computational and data Grids, monitor the jobs status during execution, and retrieve results after job completion. Users carry their jobs on their handheld devices in the form of executables (and associated libraries). Users can transparently view the status of their jobs and get back their outputs without having to know where they are being executed. In this way, our system is able to act as a high-throughput computing environment where devices ranging from powerful desktop machines to small handhelds can employ the power of the Grid. The results shown in this paper are readily applicable to the wider eScience community.Comment: 8 pages, 7 figures. Presented at the 3rd Int Conf on Mobile Computing & Ubiquitous Networking (ICMU06. London October 200

Design Patterns for Description-Driven Systems

In data modelling, product information has most often been handled separately from process information. The integration of product and process models in a unified data model could provide the means by which information could be shared across an enterprise throughout the system lifecycle from design through to production. Recently attempts have been made to integrate these two separate views of systems through identifying common data models. This paper relates description-driven systems to multi-layer architectures and reveals where existing design patterns facilitate the integration of product and process models and where patterns are missing or where existing patterns require enrichment for this integration. It reports on the construction of a so-called description-driven system which integrates Product Data Management (PDM) and Workflow Management (WfM) data models through a common meta-model.Comment: 14 pages, 13 figures. Presented at the 3rd Enterprise Distributed Object Computing EDOC'99 conference. Mannheim, Germany. September 199

UTILIZATION OF THE LINE-INTERCEPT METHOD TO ESTIMATE THE COVERAGE, DENSITY, AND AVERAGE LENGTH OF ROW SKIPS IN COTTON AND OTHER ROW CROPS

In row crops, a skip is a length of row within the drill where the crop has failed to establish. If the number of skips and their mean length per acre becomes too high, then considerable losses in crop yield occur. Frequently, farmers are faced with the decision to replant a crop which has row skips. To make the best decision, reliable estimates of the stand loss due to skips must be available. In making this decision, three parameters are useful: the percent of the area per acre that is skipped, the number of individual skips (that is, density) per acre, and the mean row length per skip. The line-intercept method for the sampling of two-dimensional objects (particles) can be used to obtain estimates of these parameters. The method is illustrated with an example from a cotton field

Intrinsic and extrinsic x-ray absorption effects in soft x-ray diffraction from the superstructure in magnetite

We studied the (001/2) diffraction peak in the low-temperature phase of magnetite (Fe3O4) using resonant soft x-ray diffraction (RSXD) at the Fe-L2,3 and O-K resonance. We studied both molecular-beam-epitaxy (MBE) grown thin films and in-situ cleaved single crystals. From the comparison we have been able to determine quantitatively the contribution of intrinsic absorption effects, thereby arriving at a consistent result for the (001/2) diffraction peak spectrum. Our data also allow for the identification of extrinsic effects, e.g. for a detailed modeling of the spectra in case a "dead" surface layer is present that is only absorbing photons but does not contribute to the scattering signal.Comment: to appear in Phys. Rev.

A database for on-line event analysis on a distributed memory machine

Parallel in-memory databases can enhance the structuring and parallelization of programs used in High Energy Physics (HEP). Efficient database access routines are used as communication primitives which hide the communication topology in contrast to the more explicit communications like PVM or MPI. A parallel in-memory database, called SPIDER, has been implemented on a 32 node Meiko CS-2 distributed memory machine. The spider primitives generate a lower overhead than the one generated by PVM or PMI. The event reconstruction program, CPREAD of the CPLEAR experiment, has been used as a test case. Performance measurerate generated by CPLEAR

A SIMULATION STUDY ON THE RELATIONSHIP BETWEEN THE ABUNDANCE AND SPATIAL DISTRIBUTION OF INSECTS AND SELECTED SAMPLING SCHEMES

During the development of a Bayesian approach to estimate insect population abundance, it was necessary to compare not only the reliability of Bayesian estimates, but to also compare these estimates to those obtained by traditional methods employed by entomologists. To facilitate these comparisons it was necessary to use simulated fields apportioned into quadrats where conditions representative of insect abundance and dispersion are modeled. Thus, a simulation model was developed using SAS to derive example insect populations from which samples could be drawn. The negative binomial distribution was used to simulate the proportion of infested plants (p) with various degrees of clustering (k) for specified quadrat sizes. Another component varies sample parameters which represent the total number of plants sampled per field, the number of plants sampled per quadrat, and thus the number of quadrats sampled per field