Multiphoton Imaging of Labeled Breast Cancer Cells to Quantify Intra and Extracellular Receptors

Every year 200,000 women in the United States are diagnosed with breast cancer. Of the cases diagnosed, 10% -15% are classified as triple negative breast cancer (TNBC) due to the absence of estrogen, progesterone, and HER-2/Neu receptors. This breast cancer sub-type is markedly more aggressive and twice as likely to develop in premenopausal women. TNBC is resistant to endocrine therapies and current targeted agents, making clinical need for the development of validated therapeutics for TNBC a pressing matter. To initiate drug development, the internalization of directly immunolabeled epidermal growth factor receptors (EGFR) in SK-BR-3 human breast adenocarcinoma cells was quantitated using live-cell multiphoton microscopy for 30 minutes over 5 minute intervals. EGFR targeting is of interest because its internalization triggers the signaling pathway that disrupts cell-cell adhesion and induces cell motility. The images acquired were processed using ImageJ and analyzed through line profiles. After measuring the full width half max at each time point of the 30-minute time series, it was determined that significant EGFR internalization did not occur

Transmitter switch for high-power microwave output

Combiner system can be used for combining output powers of two transmitters or for switching from one to the other. This can be done when pair of transmitters operate on same frequency and carriers are phase coherent as by excitation from single exciter

A Computational Procedure to Detect a New Type of High Dimensional Chaotic Saddle and its Application to the 3-D Hill's Problem

A computational procedure that allows the detection of a new type of high-dimensional chaotic saddle in Hamiltonian systems with three degrees of freedom is presented. The chaotic saddle is associated with a so-called normally hyperbolic invariant manifold (NHIM). The procedure allows to compute appropriate homoclinic orbits to the NHIM from which we can infer the existence a chaotic saddle. NHIMs control the phase space transport across an equilibrium point of saddle-centre-...-centre stability type, which is a fundamental mechanism for chemical reactions, capture and escape, scattering, and, more generally, ``transformation'' in many different areas of physics. Consequently, the presented methods and results are of broad interest. The procedure is illustrated for the spatial Hill's problem which is a well known model in celestial mechanics and which gained much interest e.g. in the study of the formation of binaries in the Kuiper belt.Comment: 12 pages, 6 figures, pdflatex, submitted to JPhys

Time-frequency analysis of chaotic systems

We describe a method for analyzing the phase space structures of Hamiltonian systems. This method is based on a time-frequency decomposition of a trajectory using wavelets. The ridges of the time-frequency landscape of a trajectory, also called instantaneous frequencies, enable us to analyze the phase space structures. In particular, this method detects resonance trappings and transitions and allows a characterization of the notion of weak and strong chaos. We illustrate the method with the trajectories of the standard map and the hydrogen atom in crossed magnetic and elliptically polarized microwave fields.Comment: 36 pages, 18 figure

Chemochromic Hydrogen Sensors

As fossil fuel supplies decline, hydrogen is quickly becoming an increasingly important fuel source. Currently hydrogen is the prime fuel of today's space vehicles (e.g., Space Shuttle) and featured as a fuel for some prototype vehicles such as the BMW seven series model. Hydrogen is a colorless, odorless gas with a 4% lower explosive limit which makes leak detection a priority. In an effort to support the use of hydrogen, a chemochromic (color changing) sensor was developed that is robust, simple to use, and does not require active operation. It can be made into a thin tape which can be conveniently used for leak detection at flanges, valves, or outlets. Chemochromic sensors can be either reversible or irreversible; however, irreversible chemochromic sensors will be analyzed in this report. The irreversible sensor is useful during hazardous operations when personnel cannot be present. To actively monitor leaks, testing of the irreversible sensor against environmental effects was completed and results indicated this material is suitable for outdoor use in the harsh beachside environment of Kennedy Space Center. The experiments in this report will give additional results to the environmental testing by adding solid rocket booster residue as a variable. The primary motivation for these experiments is to prepare the sensors for the launch pad environment at the Kennedy Space Center. In an effort to simulate the atmosphere at the pads before and after launch, the chemochromic sensors are exposed to solid rocket residue under various conditions

Researcher’s Reactions to Compelled Disclosure of Scientific Information

Demands placed on researchers by subpoenas for scientific information are not necessarily any greater than those placed on other third-party recipients of subpoenas

Coupling of transverse and longitudinal response in stiff polymers

The time-dependent transverse response of stiff polymers, represented as weakly-bending wormlike chains (WLCs), is well-understood on the linear level, where transverse degrees of freedom evolve independently from the longitudinal ones. We show that, beyond a characteristic time scale, the nonlinear coupling of transverse and longitudinal motion in an inextensible WLC significantly weakens the polymer response compared to the widely used linear response predictions. The corresponding feedback mechanism is rationalized by scaling arguments and quantified by a multiple scale approach that exploits an inherent separation of transverse and longitudinal correlation length scales. Crossover scaling laws and exact analytical and numerical solutions for characteristic response quantities are derived for different experimentally relevant setups. Our findings are applicable to cytoskeletal filaments as well as DNA under tension.Comment: 4 pages, 3 figures, 1 table; final versio

Telling time with an intrinsically noisy clock

Intracellular transmission of information via chemical and transcriptional networks is thwarted by a physical limitation: the finite copy number of the constituent chemical species introduces unavoidable intrinsic noise. Here we provide a method for solving for the complete probabilistic description of intrinsically noisy oscillatory driving. We derive and numerically verify a number of simple scaling laws. Unlike in the case of measuring a static quantity, response to an oscillatory driving can exhibit a resonant frequency which maximizes information transmission. Further, we show that the optimal regulatory design is dependent on the biophysical constraints (i.e., the allowed copy number and response time). The resulting phase diagram illustrates under what conditions threshold regulation outperforms linear regulation.Comment: 10 pages, 5 figure

Preface "Nonlinear processes in oceanic and atmospheric flows"

Nonlinear phenomena are essential ingredients in many oceanic and atmospheric processes, and successful understanding of them benefits from multidisciplinary collaboration between oceanographers, meteorologists, physicists and mathematicians. The present Special Issue on ``Nonlinear Processes in Oceanic and Atmospheric Flows'' contains selected contributions from attendants to the workshop which, in the above spirit, was held in Castro Urdiales, Spain, in July 2008. Here we summarize the Special Issue contributions, which include papers on the characterization of ocean transport in the Lagrangian and in the Eulerian frameworks, generation and variability of jets and waves, interactions of fluid flow with plankton dynamics or heavy drops, scaling in meteorological fields, and statistical properties of El Ni\~no Southern Oscillation.Comment: This is the introductory article to a Special Issue on "Nonlinear Processes in Oceanic and Atmospheric Flows'', published in the journal Nonlinear Processes in Geophysics, where the different contributions are summarized. The Special Issue itself is freely available from http://www.nonlin-processes-geophys.net/special_issue103.htm