Refining trace metal temperature proxies in cold-water scleractinian and stylasterid corals

The Li/Mg, Sr/Ca and oxygen isotopic (O) compositions of many marine biogenic carbonates are sensitive to seawater temperature. Corals, as cosmopolitan marine taxa with carbonate skeletons that can be precisely dated, represent ideal hosts for these geochemical proxies. However, efforts to calibrate and refine temperature proxies in cold-water corals (<20 °C) remain limited. Here we present skeletal Li/Mg, Sr/Ca, O and carbon isotope (C) data from live-collected specimens of aragonitic scleractinian corals (Balanophyllia, Caryophyllia, Desmophyllum, Enallopsammia, Flabellum, Lophelia, and Vaughanella), both aragonitic and high-Mg calcitic stylasterid genera (Stylaster and Errina), and shallow-water high-Mg calcite crustose coralline algae (Lithophyllum, Hydrolithon, and Neogoniolithon). We interpret these data in conjunction with results from previously explored taxa including aragonitic zooxanthellate scleractinia and foraminifera, and high-Mg calcite octocorals. We show that Li/Mg ratios covary most strongly with seawater temperature, both for aragonitic and high-Mg calcitic taxa, making for reliable and universal seawater temperature proxies. Combining all of our biogenic aragonitic Li/Mg data with previous calibration efforts we report a refined relationship to temperature: Li/MgAll Aragonite = (). This calibration now permits paleo-temperature reconstruction to better than ±3.4 °C (95% prediction intervals) across biogenic aragonites, regardless of taxon, from 0 to 30 °C. For taxa in this study, aragonitic stylasterid Li/Mg offers the most robust temperature proxy (Li/MgStylasterid (Arag) = ()) with a reproducibility of ±2.3 °C. For the first time, we show that high-Mg calcites have a similar exponential relationship with temperature, but with a lower intercept value (Li/Mg = ()). This calibration opens the possibility of temperature reconstruction using high-Mg calcite corals and coralline algae. The commonality in the relationship between Li/Mg and temperature transcends phylogeny and suggests abiogenic trace metal incorporation mechanism

Phylogenomic analysis of a 55.1 kb 19-gene dataset resolves a monophyletic Fusarium that includes the Fusarium solani Species Complex

Scientific communication is facilitated by a data-driven, scientifically sound taxonomy that considers the end-user¿s needs and established successful practice. In 2013, the Fusarium community voiced near unanimous support for a concept of Fusarium that represented a clade comprising all agriculturally and clinically important Fusarium species, including the F. solani species complex (FSSC). Subsequently, this concept was challenged in 2015 by one research group who proposed dividing the genus Fusarium into seven genera, including the FSSC described as members of the genus Neocosmospora, with subsequent justification in 2018 based on claims that the 2013 concept of Fusarium is polyphyletic. Here, we test this claim and provide a phylogeny based on exonic nucleotide sequences of 19 orthologous protein-coding genes that strongly support the monophyly of Fusarium including the FSSC. We reassert the practical and scientific argument in support of a genus Fusarium that includes the FSSC and several other basal lineages, consistent with the longstanding use of this name among plant pathologists, medical mycologists, quarantine officials, regulatory agencies, students, and researchers with a stake in its taxonomy. In recognition of this monophyly, 40 species described as genus Neocosmospora were recombined in genus Fusarium, and nine others were renamed Fusarium. Here the global Fusarium community voices strong support for the inclusion of the FSSC in Fusarium, as it remains the best scientific, nomenclatural, and practical taxonomic option availabl

The effect of acidified water on the cold-water coral, Lophelia pertusa: Distribution in the Southern California Bight and analysis of skeletal dissolution

As the aragonite saturation horizon shoals globally, cold-water corals may be among the first organisms affected by an acidifying ocean. The current study evaluated the effect of low aragonite saturation states (Ω arag) on the cosmopolitan cold-water reef-forming coral, Lophelia pertusa. Part I employed laboratory experiments to identify threshold Ω arag below which the skeleton begins to dissolve and to quantify the dissolution rate of L. pertusa skeleton in acidified water. Aside from the lowest treatment (Ωarag =0.5) dissolution rates were lower than many published growth rates. The critical Ω arag was near 0.80, indicating that skeletal fragments not covered by tissue, such as hold-fasts and dead coral matrix, would be vulnerable to dissolution at Ωarag 0.9). Total area of L. pertusa was not correlated with depth, but proportion of live coral decreased with increasing depth. Oxygen concentrations and Ωarag near aggregations were lower than reported for L. pertusa in other ocean basins. The SCB reflects marginal habitat for L. pertusa and provides insight to the future of cold-water coral reefs as the ocean acidifies globally

Distribution of mega fauna on sulfide edifices on the Eastern Lau Spreading Center and Valu Fa Ridge

International audienceHydrothermal vent sulfide edifices contain some of the most extreme thermal and chemical conditions in which animals are able to live. As a result, sulfide edifices in the East Pacific Rise, Juan de Fuca Ridge, and Mid Atlantic Ridge vent systems often contain distinct faunal assemblages. In this study, we used high-resolution imagery and in-situ physico-chemical measurements within the context of a Geographic Information System (GIS) to examine community structure and niche differentiation of dominant fauna on sulfide edifices in the Eastern Lau Spreading Center (ELSC) and Valu Fa Ridge (VFR) in the Western Pacific Ocean. Our results show that ELSC and VFR sulfide edifices host two distinct types of communities. One type, that covers the majority of sulfide edifice faces, is overall very similar to nearby lava communities and biomass is dominated by the same chemoautotrophic symbiont-containing molluscs that dominate lava communities, namely the provannid gastropods Alviniconcha spp. and Ifremeria nautilei and the mytilid bivalve Bathymodiolus brevior. The spatial distribution of the dominant molluscs is often a variation of the pattern of concentric rings observed on lavas, with Alviniconcha spp. at the tops of edifices where exposure to vent flow is the highest, and I. nautilei and B. brevior below. Our physico-chemical measurements indicate that because of rapid dispersion of vent fluid, habitable area for symbiont-containing fauna is quite limited on sulfide edifices, and the realized niches of the mollusc groups are narrower on sulfide edifices than on lavas. We suggest that competition plays an important role in determining the realized distributions of the mollusc groups on edifices. The other habitat, present in small patches of presumably hot, new anhydrite, is avoided by the dominant symbiont-containing molluscs and inhabited by crabs, shrimp and polynoids that are likely more heat tolerant. The ratio of sulfide concentration to temperature anomaly of vent fluids was significantly different between sulfide edifice sites and lava sites in the southern vent fields but not in the northern vent fields. We suggest that this is due to increased sulfide consumption by a large microbial consortium associated with the more friable andesitic lava substrates in the south

No to Neocosmospora: Phylogenomic and Practical Reasons for Continued Inclusion of the Fusarium solani Species Complex in the Genus Fusarium

Contains fulltext : 225984.pdf (publisher's version ) (Open Access)This article is to alert medical mycologists and infectious disease specialists of recent name changes of medically important species of the filamentous mold Fusarium Fusarium species can cause localized and life-threating infections in humans. Of the 70 Fusarium species that have been reported to cause infections, close to one-third are members of the Fusarium solani species complex (FSSC), and they collectively account for approximately two-thirds of all reported Fusarium infections. Many of these species were recently given scientific names for the first time by a research group in the Netherlands, but they were misplaced in the genus Neocosmospora In this paper, we present genetic arguments that strongly support inclusion of the FSSC in Fusarium There are potentially serious consequences associated with using the name Neocosmospora for Fusarium species because clinicians need to be aware that fusaria are broadly resistant to the spectrum of antifungals that are currently available

No to <i>Neocosmospora</i>: Phylogenomic and Practical Reasons for Continued Inclusion of the <i>Fusarium solani</i> Species Complex in the Genus <i>Fusarium</i>

ABSTRACT This article is to alert medical mycologists and infectious disease specialists of recent name changes of medically important species of the filamentous mold Fusarium. Fusarium species can cause localized and life-threating infections in humans. Of the 70 Fusarium species that have been reported to cause infections, close to one-third are members of the Fusarium solani species complex (FSSC), and they collectively account for approximately two-thirds of all reported Fusarium infections. Many of these species were recently given scientific names for the first time by a research group in the Netherlands, but they were misplaced in the genus Neocosmospora. In this paper, we present genetic arguments that strongly support inclusion of the FSSC in Fusarium. There are potentially serious consequences associated with using the name Neocosmospora for Fusarium species because clinicians need to be aware that fusaria are broadly resistant to the spectrum of antifungals that are currently available

Phylogenomic analysis of a 55.1-kb 19-gene dataset resolves a monophyletic Fusarium that includes the Fusarium solani species complex.

Scientific communication is facilitated by a data-driven, scientifically sound taxonomy that considers the end-user's needs and established successful practice. In 2013, the Fusarium community voiced near unanimous support for a concept of Fusarium that represented a clade comprising all agriculturally and clinically important Fusarium species, including the F. solani species complex (FSSC). Subsequently, this concept was challenged in 2015 by one research group who proposed dividing the genus Fusarium into seven genera, including the FSSC described as members of the genus Neocosmospora, with subsequent justification in 2018 based on claims that the 2013 concept of Fusarium is polyphyletic. Here, we test this claim and provide a phylogeny based on exonic nucleotide sequences of 19 orthologous protein-coding genes that strongly support the monophyly of Fusarium including the FSSC. We reassert the practical and scientific argument in support of a genus Fusarium that includes the FSSC and several other basal lineages, consistent with the longstanding use of this name among plant pathologists, medical mycologists, quarantine officials, regulatory agencies, students, and researchers with a stake in its taxonomy. In recognition of this monophyly, 40 species described as genus Neocosmospora were recombined in genus Fusarium, and nine others were renamed Fusarium. Here the global Fusarium community voices strong support for the inclusion of the FSSC in Fusarium, as it remains the best scientific, nomenclatural, and practical taxonomic option available

Phylogenomic analysis of a 55.1 kb 19-gene dataset resolves a monophyletic Fusarium that includes the Fusarium solani Species Complex

Scientific communication is facilitated by a data-driven, scientifically sound taxonomy that considers the end-user's needs and established successful practice. Previously (Geiser et al. 2013; Phytopathology 103:400-408. 2013), the Fusarium community voiced near unanimous support for a concept of Fusarium that represented a clade comprising all agriculturally and clinically important Fusarium species, including the F. solani Species Complex (FSSC). Subsequently, this concept was challenged by one research group (Lombard et al. 2015 Studies in Mycology 80: 189-245) who proposed dividing Fusarium into seven genera, including the FSSC as the genus Neocosmospora, with subsequent justification based on claims that the Geiser et al. (2013) concept of Fusarium is polyphyletic (Sandoval-Denis et al. 2018; Persoonia 41:109-129). Here we test this claim, and provide a phylogeny based on exonic nucleotide sequences of 19 orthologous protein-coding genes that strongly support the monophyly of Fusarium including the FSSC. We reassert the practical and scientific argument in support of a Fusarium that includes the FSSC and several other basal lineages, consistent with the longstanding use of this name among plant pathologists, medical mycologists, quarantine officials, regulatory agencies, students and researchers with a stake in its taxonomy. In recognition of this monophyly, 40 species recently described as Neocosmospora were recombined in Fusarium, and nine others were renamed Fusarium. Here the global Fusarium community voices strong support for the inclusion of the FSSC in Fusarium, as it remains the best scientific, nomenclatural and practical taxonomic option available