Enhancing Yield and Biological Nitrogen Fixation of Common Beans

Two studies were conducted at the ISU Horticulture Station to evaluate potential limitations on yield and atmospheric nitrogen fixation by common bean (Phaseolus vulgaris L.). This legume is a food staple for small landholder farm families worldwide. But it has a limited capacity for nitrogen fixation and often yields only a fraction of its genetic potential. In these studies, we examined the dependence of pod filling on current assimilate supply, as well as the potential to improve nitrogen fixation using an inoculant shown to enhance biological nitrogen fixation under stressful conditions

Feasibility of incorporating objective measures of physical activity in the STEPS program. A pilot study in Malawi

Background Physical activity is an important determinant of human health but it is inherently difficult to measure. Global surveillance systems for physical activity have so far only included self-report measures, which capture only a small subset of daily activity and are limited due to issues of recall bias. Wrist-worn accelerometry offers a reasonably cost-effective objective method of measuring physical activity during free-living with proven feasibility in large-scale population studies. The key objective of this project was to pilot wrist-worn accelerometry within a surveillance setting in order to inform the implementation of this methodology into the global WHO STEPS programme. Method development and implementation Accelerometry protocols were developed and deployed within an existing STEPS survey in two regions of Malawi (Dowa and Lilongwe). This also included developing training for local staff. Survey information was collected on tablets. Accelerometers could only be set up on PCs, so the protocol was adapted to do this in advance of recruiting participants. For this, an alternative Participant ID linkage system was developed to enable linking accelerometer files to the rest of the survey data. On the whole, the implementation was successful. During the process evaluation, some issues were identified. For example, black wrist straps were culturally associated with the Devil by some participants. A total of 499 participants were recruited for Step 1 and 2, of whom 446 returned for Step 3 measurements which included accelerometry. The accelerometry data collection was well accepted by both fieldwork team members and study participants, with only four participants (<1% of those eligible) declining to wear the device. There were no major technical issues with devices, although a small number of wrist straps were damaged and 13 monitors were lost (3% of deployed). Of 456 accelerometer files retrieved, 410 files (90%) could be linked to survey participants. All but two accelerometer files could be processed with standard techniques to produce participant-level summary results. Sufficient valid data (defined as at least 48 hours of monitor wear time with reasonable diurnal representation) were available for 386 survey participants (87% of eligible). Results Objective levels of physical activity in Malawi from this pilot study were about 50% higher than levels observed in the UK using similar methodology. Rural dwellers were more active than urban dwellers, particularly in the morning hours of the day. Men had higher activity levels compared to women, and there were decreasing trends with advancing age. Conclusion and recommendations This pilot demonstrated that it is feasible to implement wrist-worn accelerometry within the STEPS program in settings such as Malawi. Detailed description of objectively measured physical activity patterns could be produced from nearly all accelerometer files retrieved, including behavioural indicators known to be important for human health. In future surveys, culturally specific issues that could impact data collection should be identified early in the fieldwork planning stage and changes to the protocol made. Experiences from this pilot have led to development of software platforms that allow accelerometers to be set up from Android tablets at the point of issuing the device to the participant, which would simplify future fieldwork training and reduce risk of data linkage error

Diurnal Profiles of Physical Activity and Postures Derived From Wrist-Worn Accelerometry in UK Adults

Background: Wrist-worn accelerometry is the commonest objective method for measuring physical activity in large-scale epidemiological studies. Research-grade devices capture raw triaxial acceleration which, in addition to quantifying movement, facilitates assessment of orientation relative to gravity. No population-based study has yet described the interrelationship and variation of these features by time and personal characteristics. Methods: 2,043 United Kingdom adults (35–65 years) wore an accelerometer on the non-dominant wrist and a chest-mounted combined heart-rate-and-movement sensor for 7 days free-living. From raw (60 Hz) wrist acceleration, we derived movement (non-gravity acceleration) and pitch and roll (forearm) angles relative to gravity. We inferred physical activity energy expenditure (PAEE) from combined sensing and sedentary time from approximate horizontal arm angle coupled with low movement. Results: Movement differences by time-of-day and day-of-week were associated with forearm angles; more movement in downward forearm positions. Mean (SD) movement was similar between sexes ∼31 (42) mg, despite higher PAEE in men. Women spent longer with the forearm pitched &gt;0°, above horizontal (53% vs 36%), and less time at &lt;0° (37% vs 53%). Diurnal pitch was 2.5–5° above and 0–7.5°below horizontal during night and daytime, respectively; corresponding roll angles were ∼0° (hand flat) and ∼20° (thumb-up). Differences were more pronounced in younger participants. All diurnal profiles indicated later wake-times on weekends. Daytime pitch was closer to horizontal on weekdays; roll was similar. Sedentary time was higher (17 vs 15 hours/day) in obese vs normal-weight individuals. Conclusions: More movement occurred in forearm positions below horizontal, commensurate with activities including walking. Findings suggest time-specific population differences in behaviors by age, sex, and BMI.The authors were supported by the UK Medical Research Council (MC_UU_12015/3) and the NIHR Biomedical Research Centre in Cambridge (IS-BRC-1215-20014). We would also like to thank EPSRC and GlaxoSmithKline for their support through graduate fellowships (iCase 17100053)

Describing objectively measured physical activity levels, patterns, and correlates in a cross sectional sample of infants and toddlers from South Africa.

BACKGROUND: Physical activity is considered to have health benefits across the lifespan but levels, patterns, and correlates have not been well described in infants and toddlers under the age of two years. METHODS: This study aimed to describe objectively and subjectively measured physical activity in a group of South African infants aged 3- to 24-months (n = 140), and to investigate individual and maternal correlates of physical activity in this sample. Infants' physical activity was measured using an Axivity AX3 wrist-worn accelerometer for one week and the mean vector magnitude was calculated. In addition, mothers reported the average amount of time their infant spent in various types of activities (including in front of the TV), their beliefs about infants' physical activity, access to equipment in the home environment, and ages of motor development milestone attainment. Analysis of variance (ANOVA) and pair-wise correlations were used to test age and sex differences and associations with potential correlates. RESULTS: There were significant age and sex effects on the distribution of time spent at different physical activity intensities (Wilks' lambda = 0.06, p < 0.01). In all cases, the trend was for boys to spend more time in higher intensity physical activity and less time in lower intensity activity than girls; and for time spent in higher intensity activities to be higher in older children. Time spent outside was higher in boys, and this reached significance at 18-months (F = 3.84, p = 0.02). Less concern around floor play was associated with higher physical activity at 12-months in females only (p = 0.03, r = 0.54), and no other maternal beliefs were correlated with physical activity. The majority (94%) of children were exceeding TV time recommendations. When controlling for age and sex, overall TV time was positively associated with BMI z-score (β=0.01, p = 0.05). CONCLUSION: This study is the first to show sex and age differences in the patterns of physical activity, and to report on objectively measured and maternal reported physical activity and sedentary behaviour in the first two years of life in South Africa infants. Infants and toddlers should be provided with as many opportunities to be active through play as possible, and TV time should be limited

Flower numbers, pod production, pollen viability, and pistil function are reduced and flower and pod abortion increased in chickpea (Cicer arietinum L.) under terminal drought

Terminal drought during the reproductive stage is a major constraint to yield of chickpea in many regions of the world. Termination of watering (WS) during podding in a small-seeded desi chickpea (Cicer arietinum L.) cultivar, Rupali, and a large-seeded kabuli chickpea cultivar, Almaz, induced a decrease in predawn leaf water potential (LWP), in the rate of photosynthesis, and in stomatal conductance. Compared to well-watered (WW) controls, the WS treatment reduced flower production by about two-thirds. In the WW treatment, about 15% of the flowers aborted and 42% (Rupali) and 67% (Almaz) of the pods aborted, whereas in the WS treatment 37% and 56% of the flowers aborted and 54% and 73% of the pods aborted, resulting in seed yields of 33% and 15% of the yields in WW plants in Rupali and Almaz, respectively. In vitro pollen viability and germination in Rupali decreased by 50% and 89% in the WS treatment, and pollen germination decreased by 80% in vivo when pollen from a WS plant was placed on a stigma of a WW plant. While about 37% of the germinated pollen tubes from WW plants and 22% from the WS plants reached the ovary in the WW plants, less than 3% of pollen grains reached the ovary when pollen from either WS or WW plants was placed on a stigma of a WS plant. It is concluded that, in addition to pod abortion, flower abortion is an important factor limiting yield in chickpea exposed to terminal drought and that water deficit impaired the function of the pistil/style more than the pollen

The descriptive epidemiology of accelerometer-measured physical activity in older adults.

BACKGROUND: Objectively measured physical activity between older individuals and between populations has been poorly described. We aimed to describe and compare the variation in accelerometry data in older UK (EPIC-Norfolk) and American (NHANES) adults. METHODS: Physical activity was measured by uniaxial accelerometry in 4,052 UK (49-91 years) and 3459 US older adults (49-85 years). We summarized physical activity as volume (average counts/minute), its underlying intensity distribution, and as time spent 809 counts/minute is used 18.7% of people reached the 30 min/day threshold. By comparison, 2.5% and 9.5% of American older adults accumulated activity at these levels, respectively. CONCLUSION: As assessed by objectively measured physical activity, the majority of older adults in this UK study did not meet current activity guidelines. Older adults in the UK were more active overall, but also spent more time being sedentary than US adults.This work was supported by programme grants from the Medical Research Council [G9502233; G0401527] and Cancer Research UK [C864/A8257]. A grant from Research into Ageing [262] funded the 3rd health check clinic. KW is supported by a British Heart Foundation Intermediate Basic Science Research Fellowship [FS/12/58/29709], and AJMC, SJG, NJW, and SB are supported by MRC programme grants [MC_UU_12015/3 and MC_UU_12015/4].This is the final version of the article. It was first available from BioMed Central via http://dx.doi.org/10.1186/s12966-015-0316-

Network Harmonisation of Physical Activity Variables Through Indirect Validation

Harmonisation of data for pooled analysis relies on the principle of inferential equivalence between variables from different sources. Ideally, this is achieved using models of the direct relationship with gold standard criterion measures, but the necessary validation study data are often unavailable. This study examines an alternative method of network harmonisation using indirect models. Starting methods were self-report or accelerometry, from which we derived indirect models of relationships with doubly labelled water (DLW)-based physical activity energy expenditure (PAEE) using sets of two bridge equations via one of three intermediate measures. Coefficients and performance of indirect models were compared to corresponding direct models (linear regression of DLW-based PAEE on starting methods). Indirect model beta coefficients were attenuated compared to direct model betas (10-63%), narrowing the range of PAEE values; attenuation was greater when bridge equations were weak. Directly and indirectly harmonised models had similar error variance but most indirectly derived values were biased at group-level. Correlations with DLW-based PAEE were identical after harmonisation using continuous linear but not categorical models. Wrist acceleration harmonised to DLW-based PAEE via combined accelerometry and heart rate sensing had lowest error variance (24.5%) and non-significant mean bias 0.9 (95%CI: -1.6; 3.4) kJ•day-1•kg-1. Associations between PAEE and BMI were similar for directly and indirectly harmonised values, but most fell outside the confidence interval of the criterion PAEE-to-BMI association. Indirect models can be used for harmonisation. Performance depends on the measurement properties of original data, variance explained by available bridge equations, and similarity of population characteristics.This work was funded by UK Medical Research Council (MC_UU_12015/3) and the NIHR Biomedical Research Centre in Cambridge (IS-BRC-1215-20014). UK Biobank is acknowledged for contributing to the costs of the fieldwork. Newcastle University and MedImmune are acknowledged for contributing to the costs of the doubly labelled water measurements. The funders had no role in the design, conduct, analysis, and decision to publish results from this study

Applicability of a Markov-chain Monte Carlo method for damage detection on data from the Z-24 and Tamar suspension bridges

In the Structural Health Monitoring of bridges, the effects of the operational and environmental variability on the structural responses have posed several challenges for early damage detection. In order to overcome those challenges, in the last decade recourse has been made to the statistical pattern recognition paradigm based on vibration data from long-term monitoring. The use of purely data-based algorithms that do not depend on the physical descriptions of the structures have characterized this paradigm. However, one drawback of this procedure is how to set up the baseline condition for new and existing bridges. Therefore, this paper proposes an algorithm with a Bayesian approach based on a Markov-chain Monte Carlo method to cluster structural responses of the bridges into a reduced number of global state conditions, by taking into account eventual multimodality and heterogeneity of the data distribution. This approach, along with the Mahalanobis squared-distance, permits one to form an algorithm able to detect structural damage based on daily response data even under abnormal events caused by operational and environmental variability. The applicability of this approach is first demonstrated on standard data sets from the Z-24 Bridge, Switzerland. Afterwards, for generalization purposes, it is applied on datasets from a supposed undamaged bridge condition, namely the Tamar Bridge, England. The analysis suggests that this algorithm might be useful for bridge applications, because it permits one to overcome some of the limitations posed by the pattern recognition paradigm, especially when dealing with limited amounts of training data.info:eu-repo/semantics/publishedVersio

Sleep duration and cardiometabolic risk factors among individuals with type 2 diabetes.

OBJECTIVE: To examine the association between sleep duration and cardiometabolic risk factors among individuals with recently diagnosed type 2 diabetes (n = 391). METHODS: Sleep duration was derived using a combination of questionnaire and objective heart rate and movement sensing in the UK ADDITION-Plus study (2002-2007). Adjusted means were estimated for individual cardiometabolic risk factors and clustered cardiometabolic risk (CCMR) by five categories of sleep duration. RESULTS: We observed a J-shaped association between sleep duration and CCMR - individuals sleeping 7 to <8 h had a significantly better CCMR profile than those sleeping ≥9 h. Independent of physical activity and sedentary time, individuals sleeping 7 to <8 h had lower triacylglycerol (0.62 mmol/l (0.29, 1.06)) and higher high-density lipoprotein (HDL)-cholesterol levels (0.23 mmol/l (0.16, 0.30)) compared with those sleeping ≥9 h, and a lower waist circumference (7.87 cm (6.06, 9.68)) and body mass index (BMI) (3.47 kg/m(2) (2.69, 4.25)) than those sleeping <6 h. Although sleeping 7 to <8 h was associated with lower levels of systolic and diastolic blood pressure, HbA1c, total cholesterol, and low-density lipoprotein (LDL)-cholesterol, these associations were not statistically significant. CONCLUSIONS: Sleep duration has a J-shaped association with CCMR in individuals with diabetes, independent of potential confounding. Health promotion interventions might highlight the importance of adequate sleep in this high-risk population.The trial is supported by the Wellcome Trust, the Medical Research Council, Diabetes UK and National Health Service R&D support funding. SJG was a member of the National Institute for Health Research (NIHR) School for Primary Care Research. The General Practice and Primary Care Research Unit was supported by NIHR Research funds. SJG received support from the Department of Health NIHR Programme Grant funding scheme [RP-PG-0606-1259]. ATP is supported by the NIHR Biomedical Research Centre at Guy’s and St Thomas’ NHS Foundation Trust and King’s College London.This is the author accepted manuscript. The final version is available from Elsevier via http://dx.doi.org/10.1016/j.sleep.2014.10.00

Magnetic properties of the Old Crow tephra: Identification of a complex iron titanium oxide mineralogy

International audience[1] The mineralogy and grain-size distribution of the Fe-Ti oxide population of the Old Crow tephra bed, outcropping at the Halfway House loess deposit in central Alaska, are characterized through multiple low-and high-temperature magnetization experiments. The characterization is facilitated by heavy liquid separation of the bulk sample into a low-density ( 0.8 and may play an equally important role as magnetic indicator of titanomagnetite. Furthermore, we demonstrate the ability of low-temperature magnetism to locate a 1 mm thick tephra bed dispersed in loess over 10 cm depth, through the identification of very low concentrations of a titanohematite phase with y = 0.9. The potential for advancing regional correlation of sedimentary deposits through the identification of Fe-Ti oxides common to tephra beds by low-temperature magnetism is illustrated in this study. INDEX TERMS: 1540 Geomagnetism and Paleomagnetism: Rock and mineral magnetism; 1512 Geomagnetism and Paleomagnetism: Environmental magnetism; 1519 Geomagnetism and Paleomagnetism: Magnetic mineralogy and petrology; 8404 Volcanology: Ash deposits; 5109 Physical Properties of Rocks: Magnetic and electrical properties; KEYWORDS: low-temperature magnetism, frequency and amplitude dependence of AC susceptibility, ilmenite-hematite and magnetite-ulvospinel solid solution series, tephra, stratigraphic correlatio