Xenogeneic silencing strategies in bacteria are dictated by RNA polymerase promiscuity

Horizontal gene transfer facilitates dissemination of favourable traits among bacteria. However, foreign DNA can also reduce host fitness: incoming sequences with a higher AT content than the host genome can misdirect transcription. Xenogeneic silencing proteins counteract this by modulating RNA polymerase binding. In this work, we compare xenogeneic silencing strategies of two distantly related model organisms: Escherichia coli and Bacillus subtilis. In E. coli, silencing is mediated by the H-NS protein that binds extensively across horizontally acquired genes. This prevents spurious non-coding transcription, mostly intragenic in origin. By contrast, binding of the B. subtilis Rok protein is more targeted and mostly silences expression of functional mRNAs. The difference reflects contrasting transcriptional promiscuity in E. coli and B. subtilis, largely attributable to housekeeping RNA polymerase σ factors. Thus, whilst RNA polymerase specificity is key to the xenogeneic silencing strategy of B. subtilis, transcriptional promiscuity must be overcome to silence horizontally acquired DNA in E. coli

Which is a better predictor of plant traits : temperature or precipitation?

Question: Are plant traits more closely correlated with mean annual temperature, or with mean annual precipitation? Location: Global. Methods: We quantified the strength of the relationships between temperature and precipitation and 21 plant traits from 447,961 species-site combinations worldwide. We used meta-analysis to provide an overall answer to our question. Results: Mean annual temperature was significantly more strongly correlated with plant traits than was mean annual precipitation. Conclusions: Our study provides support for some of the assumptions of classical vegetation theory, and points to many interesting directions for future research. The relatively low R² values for precipitation might reflect the weak link between mean annual precipitation and the availability of water to plants.14 page(s