Eotaxin: a potent eosinophil chemoattractant cytokine detected in a guinea pig model of allergic airways inflammation.

Eosinophil accumulation is a prominent feature of allergic inflammatory reactions, such as those occurring in the lung of the allergic asthmatic, but the endogenous chemoattractants involved have not been identified. We have investigated this in an established model of allergic inflammation, using in vivo systems both to generate and assay relevant activity. Bronchoalveolar lavage (BAL) fluid was taken from sensitized guinea pigs at intervals after aerosol challenge with ovalbumin. BAL fluid was injected intradermally in unsensitized assay guinea pigs and the accumulation of intravenously injected 111In-eosinophils was measured. Activity was detected at 30 min after allergen challenge, peaking from 3 to 6 h and declining to low levels by 24 h. 3-h BAL fluid was purified using high performance liquid chromatography techniques in conjunction with the skin assay. Microsequencing revealed a novel protein from the C-C branch of the platelet factor 4 superfamily of chemotactic cytokines. The protein, eotaxin, exhibits homology of 53% with human MCP-1, 44% with guinea pig MCP-1, 31% with human MIP-1α, and 26% with human RANTES. Laser desorption time of flight mass analysis gave four different signals (8.15, 8.38, 8.81, and 9.03 kD), probably reflecting differential O-glycosylation. Eotaxin was highly potent, inducing substantial 111In-eosinophil accumulation at a 1-2-pmol dose in the skin, but did not induce significant 111In-neutrophil accumulation. Eotaxin was a potent stimulator of both guinea pig and human eosinophils in vitro. Human recombinant RANTES, MIP-1α, and MCP-1 were all inactive in inducing 111In-eosinophil accumulation in guinea pig skin; however, evidence was obtained that eotaxin shares a binding site with RANTES on guinea pig eosinophils. This is the first description of a potent eosinophil chemoattractant cytokine generated in vivo and suggests the possibility that similar molecules may be important in the human asthmatic lung

Synchrotron analysis of toughness anomalies in nanostructured bainite

High-resolution synchrotron X-ray diffraction has been used to characterise the notch root regions of Charpy impact test specimens of a superbainitic steel, both before and after loading. The changes in the volume fraction of austenite induced by the application of a three-point-bending load were quantified. Analysis of diffraction peak shifts revealed the extent of residual tensile and compressive strains present due to both machining and an applied load. The results lend support to the hypothesis that the comparatively low energies absorbed during Charpy impact testing of superbainitic steels, < 7 J, are due to the formation of stress-induced martensite at the notch root, prior to crack initiation.The authors are grateful to Prakash Srirangam Venkata and Bernard Ennis for their valuable contribution to the synchrotron work; to Diamond Light Source (Oxford) for access to the synchrotron facilities (under experiment EE8564); to Tata Steel UK and the Engineering and Physical Sciences Research Council of the UK for financial support (under EP/H500375/1 and EP/I02249X/1).This is the final version of the article. It was first available from Elsevier via http://dx.doi.org/10.1016/j.actamat.2015.11.02

Probing midplane CO abundance and gas temperature with DCO+ in the protoplanetary disk around HD 169142

Context. Physical and chemical processes in protoplanetary disks affect the disk structure and the midplane environment within which planets form. The simple deuterated molecular cation DCO+ has been proposed to act as a tracer of the disk midplane conditions. Aims. This work aims to understand which midplane conditions are probed by the DCO+ emission in the disk around the Herbig Ae star HD 169142. We explore the sensitivity of the DCO+ formation pathways to gas temperature and CO abundance. Methods. The DCO+ J = 3−2 transition was observed with Atacama Large Millimeter/submillimeter Array at a spatial resolution of ~0.3′′ (35 AU at 117 pc). We modeled the DCO+ emission in HD 169142 with a physical disk structure adapted from the literature, and employed a simple deuterium chemical network to investigate the formation of DCO+ through the cold deuterium fractionation pathway via H2D+. Parameterized models are used to modify the gas temperature and CO abundance structure of the disk midplane to test their effect on DCO+ production. Contributions from the warm deuterium fractionation pathway via CH2D+ are approximated using a constant abundance in the intermediate disk layers. Results. The DCO+ line is detected in the HD 169142 disk with a total integrated line flux of 730 ± 73 mJy km s−1. The radial intensity profile reveals a warm, inner component of the DCO+ emission at radii ≲30 AU and a broad, ring-like structure from ~50–230 AU with a peak at 100 AU just beyond the edge of the millimeter grain distribution. Parameterized models show that alterations to the midplane gas temperature and CO abundance are both needed to recover the observed DCO+ radial intensity profile. The alterations are relative to the fiducial physical structure of the literature model constrained by dust and CO observations. The best-fit model contains a shadowed, cold midplane in the region z∕r 120 AU. The warm deuterium fractionation pathway is implemented as a constant DCO+ abundance of 2.0 × 10−12 between 30–70 K and contributes >85% to the DCO+ emission at r < 83 AU in the best-fit model. Conclusions. The DCO+ emission probes a reservoir of cold material in the HD 169142 outer disk that is not probed by the millimeter continuum, the spectral energy distribution, nor the emission from the 12 CO, 13 CO, or C18O J = 2−1 lines. The DCO+ emission is a sensitive probe of gas temperature and CO abundance near the disk midplane and provides information about the outer disk beyond the millimeter continuum distribution that is largely absent in abundant gaseous tracers such as CO isotopologues

Adaptive Lévy processes and area-restricted search in human foraging

A considerable amount of research has claimed that animals’ foraging behaviors display movement lengths with power-law distributed tails, characteristic of Lévy flights and Lévy walks. Though these claims have recently come into question, the proposal that many animals forage using Lévy processes nonetheless remains. A Lévy process does not consider when or where resources are encountered, and samples movement lengths independently of past experience. However, Lévy processes too have come into question based on the observation that in patchy resource environments resource-sensitive foraging strategies, like area-restricted search, perform better than Lévy flights yet can still generate heavy-tailed distributions of movement lengths. To investigate these questions further, we tracked humans as they searched for hidden resources in an open-field virtual environment, with either patchy or dispersed resource distributions. Supporting previous research, for both conditions logarithmic binning methods were consistent with Lévy flights and rank-frequency methods–comparing alternative distributions using maximum likelihood methods–showed the strongest support for bounded power-law distributions (truncated Lévy flights). However, goodness-of-fit tests found that even bounded power-law distributions only accurately characterized movement behavior for 4 (out of 32) participants. Moreover, paths in the patchy environment (but not the dispersed environment) showed a transition to intensive search following resource encounters, characteristic of area-restricted search. Transferring paths between environments revealed that paths generated in the patchy environment were adapted to that environment. Our results suggest that though power-law distributions do not accurately reflect human search, Lévy processes may still describe movement in dispersed environments, but not in patchy environments–where search was area-restricted. Furthermore, our results indicate that search strategies cannot be inferred without knowing how organisms respond to resources–as both patched and dispersed conditions led to similar Lévy-like movement distributions

TOPBP1 missense variant Arg309Cys and breast cancer in a German hospital-based case-control study

The DNA double strand break repair gene TOPBP1 has been suggested as a breast cancer susceptibility gene and a missense variant Arg309Cys was observed at elevated frequency in familial breast cancer cases compared to healthy controls from Finland. We found the Arg309Cys allele at a 13% carrier frequency in a hospital-based series of 1064 German breast cancer patients and at a 14% carrier frequency in 1014 population controls (OR 0.89, 95%CI 0.69-1.15; p = 0.4). Arg309Cys carriers were not enriched among patients with a family history of breast cancer (OR = 0.87, 95%CI 0.53-1.43, p = 0.6) and were slightly underrepresented in patients with bilateral disease (OR = 0.49, 95%CI = 0.24-0.99; p = 0.047). In the latter group, the mean age at diagnosis was 62 years in carriers and 54 years in non-carriers (p = 0.004). We conclude that there is no evidence for the TOPBP1*Arg309Cys variant to confer an increased risk for breast cancer in the German population

Mycolactone Diffuses into the Peripheral Blood of Buruli Ulcer Patients - Implications for Diagnosis and Disease Monitoring.

BACKGROUND: Mycobacterium ulcerans, the causative agent of Buruli ulcer (BU), is unique among human pathogens in its capacity to produce a polyketide-derived macrolide called mycolactone, making this molecule an attractive candidate target for diagnosis and disease monitoring. Whether mycolactone diffuses from ulcerated lesions in clinically accessible samples and is modulated by antibiotic therapy remained to be established. METHODOLOGY/PRINCIPAL FINDING: Peripheral blood and ulcer exudates were sampled from patients at various stages of antibiotic therapy in Ghana and Ivory Coast. Total lipids were extracted from serum, white cell pellets and ulcer exudates with organic solvents. The presence of mycolactone in these extracts was then analyzed by a recently published, field-friendly method using thin layer chromatography and fluorescence detection. This approach did not allow us to detect mycolactone accurately, because of a high background due to co-extracted human lipids. We thus used a previously established approach based on high performance liquid chromatography coupled to mass spectrometry. By this means, we could identify structurally intact mycolactone in ulcer exudates and serum of patients, and evaluate the impact of antibiotic treatment on the concentration of mycolactone. CONCLUSIONS/SIGNIFICANCE: Our study provides the proof of concept that assays based on mycolactone detection in serum and ulcer exudates can form the basis of BU diagnostic tests. However, the identification of mycolactone required a technology that is not compatible with field conditions and point-of-care assays for mycolactone detection remain to be worked out. Notably, we found mycolactone in ulcer exudates harvested at the end of antibiotic therapy, suggesting that the toxin is eliminated by BU patients at a slow rate. Our results also indicated that mycolactone titres in the serum may reflect a positive response to antibiotics, a possibility that it will be interesting to examine further through longitudinal studies

Ground Dwelling Ants as Surrogates for Establishing Conservation Priorities in the Australian Wet Tropics

This study aims to identify a set of areas with high biodiversity value over a small spatial scale within the Australian Wet Tropics. We identified sites of high biodiversity value across an altitudinal gradient of ground dwelling ant communities using three measures of biodiversity. The three measures considered were estimated species richness, complementarity between sites and evolutionary history. The latter measure was derived using the systematic nomenclature of the ants to infer a surrogate phylogeny. The goal of conservation assessments could then be achieved by choosing the most diverse site combinations. This approach was found to be valuable for identifying the most diverse site combinations across an altitudinal gradient that could ensure the preservation of terrestrial ground dwelling invertebrates in the Australian Wet Tropics