Inhibition of the stress-activated kinase, p38, does not affect the virus transcriptional program of herpes simplex virus type 1

To investigate the impact of stress kinase p38 activation on HSV-1 transcription, we performed a global transcript profile analysis of viral mRNA using an oligonucleotide-based DNA microarray. RNA was isolated from Vero cells infected with the KOS strain of HSV-1 in the presence or absence of SB203580, a pyridinyl imidazole inhibitor of p38. Under conditions that eliminated ATF2 activation but had no effect on c-, and reduced virus yield by 85–90%, no effect on accumulation of viral IE, DE, or L transcripts was observed by array analysis or selected Northern blot analysis at 2, 4, and 6 h post infection. Results of array data from cells infected with the ICP27 mutant d27-1 in the presence or absence of SB203580 only reflected the known restricted transcription phenotype of the ICP27 mutant. This result is consistent with a role for p38 activation on virus replication lying downstream of the essential role of ICP27 in DE and perhaps late transcription regulation. No effect of SB203580 on transcription was detected after infection with the ICP0 mutant 7134, at 0.5 or 5.0 PFU/cell, though decreases in the rate of accumulation of all kinetic classes of mRNA could be detected, relative to virus. These results indicate that inhibiting p38 activity in Vero cells, while significantly reducing virus yield, demonstrated no obvious impact on the program of viral transcription

The Special Science Dilemma and How Culture Solves It

This is the final version of the article. It first appeared from Taylor & Francis via http://dx.doi.org/10.1080/00048402.2014.987149I argue that there is a tension between the claim that at least some kinds in the special sciences are multiply realized and the claim that the reason kinds are prized by science is that they enter into a variety of different empirical generalizations. Nevertheless, I show that this tension ceases in the case of ‘cultural homologues’–such as specific ideologies, religions, and folk wisdom. I argue that the instances of such special science kinds do have several projectable properties in common due to their shared history of reproduction, and that the social learning involved means we should also expect these kinds to be multiply realized

CPsuperH2.3: an Updated Tool for Phenomenology in the MSSM with Explicit CP Violation

We describe the Fortran code CPsuperH2.3, which incorporates the following updates compared with its predecessor CPsuperH2.0. It implements improved calculations of the Higgs-boson masses and mixing including stau contributions and finite threshold effects on the tau-lepton Yukawa coupling. It incorporates the LEP limits on the processes e^+ e^- to H_i Z, H_i H_j and the CMS limits on H_i to tau^+ tau^- obtained from 4.6/fb of data at a centre-of-mass energy of 7 TeV. It also includes the decay mode H_i to Z gamma and the Schiff-moment contributions to the electric dipole moments of Mercury and Radium225, with several calculational options for the case of Mercury. These additions make CPsuperH2.3 a suitable tool for analyzing possible CP-violating effects in the MSSM in the era of the LHC and a new generation of EDM experimentsComment: 31 pages, 10 eps figures, 7 tables; H to Z gamma and SM BRs included; To appear in CPC; Typos in Eq.(A.2) corrected;The program may be obtained from http://www.hep.man.ac.uk/u/jslee/CPsuperH.html, or by contacting the first author at [email protected]; A comment added after Eq.(15) and a typo in Eq.(A.4) correcte

Relaxation Effects in the Transition Temperature of Superconducting HgBa2CuO4+delta

In previous studies on a number of under- and overdoped high temperature superconductors, including YBa_{2}Cu_{3}O_{7-y} and Tl_{2}Ba_{2}CuO_{6+\delta}, the transition temperature T_c has been found to change with time in a manner which depends on the sample's detailed temperature and pressure history. This relaxation behavior in T_c is believed to originate from rearrangements within the oxygen sublattice. In the present high-pressure studies on HgBa_{2}CuO_{4+\delta} to 0.8 GPa we find clear evidence for weak relaxation effects in strongly under- and overdoped samples ($T_c\simeq 40 - 50 K$) with an activation energy $E_{A}(1 bar) \simeq 0.8 - 0.9 eV$. For overdoped HgBa_{2}CuO_{4+\delta} E_{A} increases under pressure more rapidly than previously observed for YBa_{2}Cu_{3}O_{6.41}, yielding an activation volume of +11 \pm 5 cm^{3}; the dependence of T_c on pressure is markedly nonlinear, an anomalous result for high-T_c superconductors in the present pressure range, giving evidence for a change in the electronic and/or structural properties near 0.4 GPa

PT-Symmetry Quantum Electrodynamics--PTQED

The construction of $\mathcal{PT}$-symmetric quantum electrodynamics is reviewed. In particular, the massless version of the theory in 1+1 dimensions (the Schwinger model) is solved. Difficulties with unitarity of the $S$-matrix are discussed.Comment: 11 pages, 1 figure, contributed to Proceedings of 6th International Workshop on Pseudo-Hermitian Hamiltonians in Quantum Physic

Screening polymeric ionic liquids for chromatography-based purification of bacteriophage M13

M13 bacteriophage is a key instrument in phage display applications, as well as a possible antibacterial therapeutic agent due to its highly restrictive bacterial pathogenesis, and other applications. The traditional phage purification process is usually achieved by gradient ultracentrifugation or a combination of precipitation, centrifugation and microfiltration. These approaches easily lead to long process times, high operational costs, phage aggregation and consequent product loss (approximately 60%). This work is thus focused on an alternative potential large-scale process to achieve high yield and purity while minimizing the operational costs. Electrostatic-based separation processes are also common biomolecules purification techniques. Although anion exchange chromatography has been used before to purify several viral particles, this technique has been poorly reported for the purification of M13 phage. In a recent work, our group has demonstrated the use of a predominant anion exchange process, where a polymeric ionic liquid (PIL) was used as an alternative separation matrix for M13 bacteriophage. In this work, a variety of system parameters was studied, including chemical structure of the cation and the anion, the crosslinker nature and its concentration, either in batch adsorption/elution or chromatographic operation mode. The PIL-based chromatographic operation mode revealed to be a suitable separation process for M13 from directly filtered E. coli supernatant, reaching over 70% M13 recovery and 4.6 purification factor in a single step. To our knowledge, this is the first time that PILs have been reported as separation agents for bioproducts from complex mixtures.publishe

The Effect of Shear on Phase-Ordering Dynamics with Order-Parameter-Dependent Mobility: The Large-n Limit

The effect of shear on the ordering-kinetics of a conserved order-parameter system with O(n) symmetry and order-parameter-dependent mobility \Gamma({\vec\phi}) \propto (1- {\vec\phi} ^2/n)^\alpha is studied analytically within the large-n limit. In the late stage, the structure factor becomes anisotropic and exhibits multiscaling behavior with characteristic length scales (t^{2\alpha+5}/\ln t)^{1/2(\alpha+2)} in the flow direction and (t/\ln t)^{1/2(\alpha+2)} in directions perpendicular to the flow. As in the \alpha=0 case, the structure factor in the shear-flow plane has two parallel ridges.Comment: 6 pages, 2 figure

Sneutrino-induced like sign dilepton signal with conserved R-parity

Lepton number violation could be manifest in the sneutrino sector of supersymmetric extensions of the standard model with conserved R-parity. Then sneutrinos decay partly into the ``wrong sign charged lepton'' final state, if kinematically accessible. In sneutrino pair production or associated single sneutrino production, the signal then is a like sign dilepton final state. Under favourable circumstances, such a signal could be visible at the LHC or a next generation linear collider for a relative sneutrino mass-splitting of order ${\cal O}(0.001)$ and sneutrino width of order ${\cal O}$(1 GeV). On the other hand, the like sign dilepton event rate at the TEVATRON is probably too small to be observable.Comment: 19 pages, 14 Figures. Section about LSD at LHC and TEVATRON added. Previous Title "Single sneutrino production and the wrong charged lepton signal

Multispectral UV Fluorescence Detection of a Dilute Constituent in an Optically Dense Matrix

Multispectral UV fluorescence measurements were made of an optically dense medium (fetal bovine serum, FBS) spiked with sodium salicylate at concentrate ions from 0.2 to 500 pg/ml . Analysis of the spectra show that, depending on experimental conditions, reasonably good estimates of concentration can be obtained across the entire range of concentrate ions. Experimental conditions required for recovering these estimates are demonstrated