Editorial: Controversies and solutions in environmental sciences: Addressing toxicity of sediments and soils

This is the author's accepted manuscript. The final published article is available from the link below. Copyright @ 2007 Ecomed Publishers

The Hermit March

https://digitalcommons.library.umaine.edu/mmb-ps/1300/thumbnail.jp

Nanoliter-sized overheated reactor

We report on a microfluidic system formed by 200 nl water droplets, encapsulated by a 600 nl mineral oil placed on a hydrophobically coated glass microscope cover slip. The micromachined heater underneath the glass was able to heat up the sample at a heating rate of 650 °C/s, heating the water sample up to 200 °C in less than 2 s. The sample/glass and the sample/oil interface did not have nucleation centers, showing that the sample reached a superheated stage without the necessity of being pressurized to suppress boiling. This method can be utilized for various applications currently being conducted in autoclaves.Web of Science1062art. no. 02410

Dynamics of the hydrocarbon-degrading Cycloclasticus bacteria during mesocosm-simulated oil spills

Original research articleWe used catalysed reported deposition – fluorescence in situ hybridization (CARD-FISH) to analyse changes in the abundance of the bacterial groups Alphaproteobacteria, Gammaproteobacteria and Bacteroidetes, and of hydrocarbon-degrading Cycloclasticus bacteria in mesocosms that had received polycyclic aromatic hydrocarbons (PAHs) additions. The effects of PAHs were assessed under four contrasting hydrographic conditions in the coastal upwelling system of the Rías Baixas: winter mixing, spring bloom, summer stratification and autumn upwelling. We used realistic additions of water soluble PAHs (approximately 20–30 μg l−1 equivalent of chrysene), but during the winter period we also investigated the effect of higher PAHs concentrations (10–80 μg l−1 chrysene) on the bacterial community using microcosms. The most significant change observed was a significant reduction (68 ± 5%) in the relative abundance of Alphaproteobacteria. The magnitude of the response of Cycloclasticus bacteria (positive with probe CYPU829) to PAHs additions varied depending on the initial environmental conditions, and on the initial concentration of added PAHs. Our results clearly show that bacteria of the Cycloclasticus group play a major role in low molecular weight PAHs biodegradation in this planktonic ecosystem. Their response was stronger in colder waters, when their background abundance was also higher. During the warm periods, the response of Cycloclasticus was limited, possibly due to both, a lower bioavailability of PAHs caused by abiotic factors (solar radiation, temperature), and by inorganic nutrient limitation of bacterial growth.This research was supported by the MEC contract IMPRESION (VEM2003-20021); an European Community Marie Curie Reintegration Fellowship (MERG-CT-2004-511937) and a Juan de la Cierva-MEC contract.Versión del editor5,84

Resolution and Efficiency of the ATLAS Muon Drift-Tube Chambers at High Background Rates

The resolution and efficiency of a precision drift-tube chamber for the ATLAS muon spectrometer with final read-out electronics was tested at the Gamma Irradiation Facility at CERN in a 100 GeV muon beam and at photon irradiation rates of up to 990 Hz/square cm which corresponds to twice the highest background rate expected in ATLAS. A silicon strip detector telescope was used as external reference in the beam. The pulse-height measurement of the read-out electronics was used to perform time-slewing corrections which lead to an improvement of the average drift-tube resolution from 104 microns to 82 microns without irradiation and from 128 microns to 108 microns at the maximum expected rate. The measured drift-tube efficiency agrees with the expectation from the dead time of the read-out electronics up to the maximum expected rate

Casting Alloys: the Materials and "the Clinical Effects"

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/67282/2/10.1177_08959374920060011101.pd

Stochastic optimization of a cold atom experiment using a genetic algorithm

We employ an evolutionary algorithm to automatically optimize different stages of a cold atom experiment without human intervention. This approach closes the loop between computer based experimental control systems and automatic real time analysis and can be applied to a wide range of experimental situations. The genetic algorithm quickly and reliably converges to the most performing parameter set independent of the starting population. Especially in many-dimensional or connected parameter spaces the automatic optimization outperforms a manual search.Comment: 4 pages, 3 figure

Global turbulence simulations of the tokamak edge region with GRILLIX

Turbulent dynamics in the scrape-off layer (SOL) of magnetic fusion devices is intermittent with large fluctuations in density and pressure. Therefore, a model is required that allows perturbations of similar or even larger magnitude to the time-averaged background value. The fluid-turbulence code GRILLIX is extended to such a global model, which consistently accounts for large variation in plasma parameters. Derived from the drift reduced Braginskii equations, the new GRILLIX model includes electromagnetic and electron-thermal dynamics, retains global parametric dependencies and the Boussinesq approximation is not applied. The penalisation technique is combined with the flux-coordinate independent (FCI) approach [F. Hariri and M. Ottaviani, Comput.Phys.Commun. 184:2419, (2013); A. Stegmeir et al., Comput.Phys.Commun. 198:139, (2016)], which allows to study realistic diverted geometries with X-point(s) and general boundary contours. We characterise results from turbulence simulations and investigate the effect of geometry by comparing simulations in circular geometry with toroidal limiter against realistic diverted geometry at otherwise comparable parameters. Turbulence is found to be intermittent with relative fluctuation levels of up to 40% showing that a global description is indeed important. At the same time via direct comparison, we find that the Boussinesq approximation has only a small quantitative impact in a turbulent environment. In comparison to circular geometry the fluctuations are reduced in diverted geometry, which is related to a different zonal flow structure. Moreover, the fluctuation level has a more complex spatial distribution in diverted geometry. Due to local magnetic shear, which differs fundamentally in circular and diverted geometry, turbulent structures become strongly distorted in the perpendicular direction and are eventually damped away towards the X-point