149 research outputs found
Sequential decoupling of negative-energy states in Douglas-Kroll-Hess theory
Here, we review the historical development, current status, and prospects of
Douglas--Kroll--Hess theory as a quantum chemical relativistic electrons-only
theory.Comment: 15 page
Formation and dynamics of van der Waals molecules in buffer-gas traps
We show that weakly bound He-containing van der Waals molecules can be
produced and magnetically trapped in buffer-gas cooling experiments, and
provide a general model for the formation and dynamics of these molecules. Our
analysis shows that, at typical experimental parameters, thermodynamics favors
the formation of van der Waals complexes composed of a helium atom bound to
most open-shell atoms and molecules, and that complex formation occurs quickly
enough to ensure chemical equilibrium. For molecular pairs composed of a He
atom and an S-state atom, the molecular spin is stable during formation,
dissociation, and collisions, and thus these molecules can be magnetically
trapped. Collisional spin relaxations are too slow to affect trap lifetimes.
However, helium-3-containing complexes can change spin due to adiabatic
crossings between trapped and untrapped Zeeman states, mediated by the
anisotropic hyperfine interaction, causing trap loss. We provide a detailed
model for Ag3He molecules, using ab initio calculation of Ag-He interaction
potentials and spin interactions, quantum scattering theory, and direct Monte
Carlo simulations to describe formation and spin relaxation in this system. The
calculated rate of spin-change agrees quantitatively with experimental
observations, providing indirect evidence for molecular formation in
buffer-gas-cooled magnetic traps.Comment: 20 pages, 13 figure
Mn-Acetate Complexes Studied as Single Molecules
The phenomenon of single molecule magnet (SMM) behavior of mixed valent Mn12 coordination clusters of general formula [MnMnO(RCOO)(HO)] had been exemplified by bulk samples of the archetypal [MnMnO(CHCOO)(HO)] (4) molecule, and the molecular origin of the observed magnetic behavior has found support from extensive studies on the Mn12 system within crystalline material or on molecules attached to a variety of surfaces. Here we report the magnetic signature of the isolated cationic species [MnO(CHCOO)(CHCN)] (1) by gas phase X-ray Magnetic Circular Dichroism (XMCD) spectroscopy, and we find it closely resembling that of the corresponding bulk samples. Furthermore, we report broken symmetry DFT calculations of spin densities and single ion tensors of the isolated, optimized complexes [MnO(CHCOO)(CHCN)] (1), [[MnO(CHCOO)] (2), [MnO(CHCOO)(HO)] (3), and the complex in bulk geometry [MnMnO(CHCOO)(HO)] (5). The found magnetic fingerprints – experiment and theory alike – are of a remarkable robustness: The Mn core bears almost no magnetic anisotropy while the surrounding MnIII8 ring is highly anisotropic. These signatures are truly intrinsic properties of the Mn core scaffold within all of these complexes and largely void of the environment. This likely holds irrespective of bulk packing effects
Complex lithium ion dynamics in simulated LiPO3 glass studied by means of multi-time correlation functions
Molecular dynamics simulations are performed to study the lithium jumps in
LiPO3 glass. In particular, we calculate higher-order correlation functions
that probe the positions of single lithium ions at several times. Three-time
correlation functions show that the non-exponential relaxation of the lithium
ions results from both correlated back-and-forth jumps and the existence of
dynamical heterogeneities, i.e., the presence of a broad distribution of jump
rates. A quantitative analysis yields that the contribution of the dynamical
heterogeneities to the non-exponential depopulation of the lithium sites
increases upon cooling. Further, correlated back-and-forth jumps between
neighboring sites are observed for the fast ions of the distribution, but not
for the slow ions and, hence, the back-jump probability depends on the
dynamical state. Four-time correlation functions indicate that an exchange
between fast and slow ions takes place on the timescale of the jumps
themselves, i.e., the dynamical heterogeneities are short-lived. Hence, sites
featuring fast and slow lithium dynamics, respectively, are intimately mixed.
In addition, a backward correlation beyond the first neighbor shell for highly
mobile ions and the presence of long-range dynamical heterogeneities suggest
that fast ion migration occurs along preferential pathways in the glassy
matrix. In the melt, we find no evidence for correlated back-and-forth motions
and dynamical heterogeneities on the length scale of the next-neighbor
distance.Comment: 12 pages, 13 figure
Outer-Sphere Contributions to the Electronic Structure of Type Zero Copper Proteins
Bioinorganic canon states that active-site
thiolate coordination promotes rapid electron transfer (ET)
to and from type 1 copper proteins. In recent work, we have
found that copper ET sites in proteins also can be constructed
without thiolate ligation (called “type zero” sites). Here we
report multifrequency electron paramagnetic resonance
(EPR), magnetic circular dichroism (MCD), and nuclear
magnetic resonance (NMR) spectroscopic data together with
density functional theory (DFT) and spectroscopy-oriented
configuration interaction (SORCI) calculations for type zero Pseudomonas aeruginosa azurin variants. Wild-type (type 1) and type
zero copper centers experience virtually identical ligand fields. Moreover, O-donor covalency is enhanced in type zero centers
relative that in the C112D (type 2) protein. At the same time, N-donor covalency is reduced in a similar fashion to type 1
centers. QM/MM and SORCI calculations show that the electronic structures of type zero and type 2 are intimately linked to the
orientation and coordination mode of the carboxylate ligand, which in turn is influenced by outer-sphere hydrogen bonding
TURBOMOLE: Modular program suite for ab initio quantum-chemical and condensed-matter simulations
TURBOMOLE is a collaborative, multi-national software development project aiming to provide highly efficient and stable computational tools for quantum chemical simulations of molecules, clusters, periodic systems, and solutions. The TURBOMOLE software suite is optimized for widely available, inexpensive, and resource-efficient hardware such as multi-core workstations and small computer clusters. TURBOMOLE specializes in electronic structure methods with outstanding accuracy–cost ratio, such as density functional theory including local hybrids and the random phase approximation (RPA), GW-Bethe–Salpeter methods, second-order Møller–Plesset theory, and explicitly correlated coupled-cluster methods. TURBOMOLE is based on Gaussian basis sets and has been pivotal for the development of many fast and low-scaling algorithms in the past three decades, such as integral-direct methods, fast multipole methods, the resolution-of-the-identity approximation, imaginary frequency integration, Laplace transform, and pair natural orbital methods. This review focuses on recent additions to TURBOMOLE’s functionality, including excited-state methods, RPA and Green’s function methods, relativistic approaches, high-order molecular properties, solvation effects, and periodic systems. A variety of illustrative applications along with accuracy and timing data are discussed. Moreover, available interfaces to users as well as other software are summarized. TURBOMOLE’s current licensing, distribution, and support model are discussed, and an overview of TURBOMOLE’s development workflow is provided. Challenges such as communication and outreach, software infrastructure, and funding are highlighted
TURBOMOLE: Modular program suite for ab initio quantum-chemical and condensed-matter simulations
TURBOMOLE is a collaborative, multi-national software development project aiming to provide highly efficient and stable computational tools for quantum chemical simulations of molecules, clusters, periodic systems, and solutions. The TURBOMOLE software suite is optimized for widely available, inexpensive, and resource-efficient hardware such as multi-core workstations and small computer clusters. TURBOMOLE specializes in electronic structure methods with outstanding accuracy–cost ratio, such as density functional theory including local hybrids and the random phase approximation (RPA), GW-Bethe–Salpeter methods, second-order Møller–Plesset theory, and explicitly correlated coupled-cluster methods. TURBOMOLE is based on Gaussian basis sets and has been pivotal for the development of many fast and low-scaling algorithms in the past three decades, such as integral-direct methods, fast multipole methods, the resolution-of-the-identity approximation, imaginary frequency integration, Laplace transform, and pair natural orbital methods. This review focuses on recent additions to TURBOMOLE’s functionality, including excited-state methods, RPA and Green’s function methods, relativistic approaches, high-order molecular properties, solvation effects, and periodic systems. A variety of illustrative applications along with accuracy and timing data are discussed. Moreover, available interfaces to users as well as other software are summarized. TURBOMOLE’s current licensing, distribution, and support model are discussed, and an overview of TURBOMOLE’s development workflow is provided. Challenges such as communication and outreach, software infrastructure, and funding are highlighted
Exact decoupling of the relativistic Fock operator
ISSN:1432-881XISSN:1432-223
New Strategies in Modeling Electronic Structures and Properties with Applications to Actinides
This chapter discusses contemporary quantum chemical methods and provides
general insights into modern electronic structure theory with a focus on
heavy-element-containing compounds. We first give a short overview of
relativistic Hamiltonians that are frequently applied to account for
relativistic effects. Then, we scrutinize various quantum chemistry methods
that approximate the -electron wave function. In this respect, we will
review the most popular single- and multi-reference approaches that have been
developed to model the multi-reference nature of heavy element compounds and
their ground- and excited-state electronic structures. Specifically, we
introduce various flavors of post-Hartree--Fock methods and optimization
schemes like the complete active space self-consistent field method, the
configuration interaction approach, the Fock-space coupled cluster model, the
pair-coupled cluster doubles ansatz, also known as the antisymmetric product of
1 reference orbital geminal, and the density matrix renormalization group
algorithm. Furthermore, we will illustrate how concepts of quantum information
theory provide us with a qualitative understanding of complex electronic
structures using the picture of interacting orbitals. While modern quantum
chemistry facilitates a quantitative description of atoms and molecules as well
as their properties, concepts of quantum information theory offer new
strategies for a qualitative interpretation that can shed new light onto the
chemistry of complex molecular compounds.Comment: 43 pages, 3 figures, Version of Recor
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