Temperature measurements and thermal gradient estimates on the slope and shelf edge region of the Beaufort Sea, Canada

In situ temperature measurements were conducted at 63 gravity-core stations during the 2013 expedition with the CCGS Sir Wilfrid Laurier in the Canadian Beaufort Sea. Outriggers attached to the outside of the gravity core-barrel were used to mount portable miniature temperature loggers (MTL) for down-core in situ temperature measurements. Several sub-regions were investigated during the expedition including two shelf-slope crossings, three mud volcano-type expulsion features, as well as two canyon sites. The last site visited was at the Gary Knolls, just east of the Mackenzie Trough at water depths of less than 100 m. Overall, temperature data obtained from the MTLs were of high quality at most stations and the data acquisition technique was proven to be robust and easy to adapt in the Arctic. However, depth determination for each logger position remains the largest challenge as no additional pressure sensor was used with the MTLs. Instead, depths were estimated based on the apparent core penetration and the geometry of the outriggers. The most significant result from this work is the discovery of the very large apparent geothermal gradients associated with the two expulsion features (EF) Coke Cap and the mud volcano at 420 m water depth. Temperatures measured within the top 2.5 meter below seafloor suggest geothermal gradients of up to 2.94ºC/m (Station 96, 420m EF) and 1.37 ºC/m (Station 58, Coke Cap EF). Away from the centre of the EFs, thermal gradients decrease to values of 0.5ºC/m for Station 99 at the 420 m EF, and 0.92ºC/m at Station 21 at the Coke Cap EF. Temperature data across the slope-shelf transect and the two transects across the canyon heads did not reveal considerable geothermal gradients, but show a water-depth dependent trend in temperature. From deep to shallow water, temperature appear to decrease until the most negative temperature values are found on the shelf itself at water depths of ~100 m (-1.2 to -1.4ºC). Overall, data from the top 1.0 to 1.5 meter below seafloor are likely affected by seasonal variations in the water column temperature and may not be used to define geothermal gradients. With an optimal full penetration of the core barrel, the deepest temperature data are from ~2.3 mbsf, which limits the accuracy of the estimated geothermal gradients as only few data points (2 - 4) can be used in the calculations

Thermal Characterization of Pockmarks Across Vestnesa and Svyatogor Ridges, Offshore Svalbard

The Svalbard margin represents one of the northernmost gas hydrate provinces worldwide. Vestnesa Ridge (VR) and Svyatogor Ridge (SR) west of Svalbard are two prominent sediment drifts showing abundant pockmarks and sites of seismic chimney structures. Some of these sites at VR are associated with active gas venting and were the focus of drilling and coring with the seafloor‐deployed MARUM‐MeBo70 rig. Understanding the nature of fluid migration and gas hydrate distribution requires (among other parameters) knowledge of the thermal regime and in situ gas and pore fluid composition. In situ temperature data were obtained downhole at a reference site at VR defining a geothermal gradient of ~78 mK m−1 (heat flow ~95 mW m−2). Additional heat probe data were obtained to describe the thermal regime of the pockmarks. The highest heat flow values were systematically seen within pockmark depressions and were uncorrelated to gas venting occurrences. Heat flow within pockmarks is typically ~20 mW m−2 higher than outside pockmarks. Using the downhole temperature data and gas compositions from drilling we model the regional base of the gas hydrate stability zone (BGHSZ). Thermal modeling including topographic effects suggest a BGHSZ up to 40 m deeper than estimated from seismic data. Uncertainties in sediment properties (velocity and thermal conductivity) are only partially explaining the mismatch. Capillary effects due to small sediment grain sizes may shift the free gas occurrence above the equilibrium BGHSZ. Changes in gas composition or pore fluid salinity at greater depth may also explain the discrepancy in observed and modeled BGHSZ

Heat flux estimation from borehole temperatures acquired during logging while tripping: a case study with the sea floor drill rig MARUM-MeBo

During trip out of the drill string at the end of a drilling operation (logging while tripping) borehole temperatures can be measured without the need for additional operational time. A simple interpretation of the measured borehole temperatures is difficult due to the interfering influences of the drilling operations, mainly due to flushing the borehole during drilling. In this study, we present borehole temperature data from drilling campaigns with the sea floor drill rig MARUM-MeBo200 at the Danube Deep Sea Fan (Black Sea) and west of Taiwan (South China Sea). The temperature measurements were conducted with a PT1000 temperature sensor which is integrated in a memory acoustic borehole logging tool. We developed a modeling approach in order to simulate the drilling perturbations and subsequent evolution of the temperature field within the borehole. By fitting the model data to the measured time dependent temperature depth profiles, we estimated the undisturbed heat flux at the drill sites. This study shows that knowledge of the pattern of drilling operations with alternating phases of drilling/flushing and drill string handling is crucial for comparing temperatures measured during logging while tripping and simulated temperatures

Little-studied arc-backarc system in the spotlight

A research cruise has documented changes in rift tectonics, volcanism, and hydrothermalism along the least studied and most enigmatic sector of a crustal complex in the southwest Pacific Ocean. Results from the longitudinal transect are expected to provide insight into processes involving the Kermadec arc-Havre backarc (KAHB) system, a continuum from oceanic spreading to continental rifting at a convergent plate boundary KAHB forms the central sector of an active, 2000-km arc-backarc complex between Tonga and New Zealand (Figure 1). The expedition also engaged in the first comprehensive survey of submarine vents in the Taupo Volcanic Zone (TVZ) at the south end of the KAHB system. Identified in the off-shore segment of TVZ were three major hydrothermal vent areas associated with late Quaternary fault structures. Data from the expedition and from other recent research in the same area addressed questions concerning the type of hydrothermal venting, magmatic heterogeneity along and across KAHB, the style of backarc rifting, and tectonic and magmatic consequences of anomalous terranes colliding with the subduction margin

Sexual Transmission of XMRV: A Potential Infection Route

Although XMRV dissemination in humans is a matter of debate, the prostate of select patients seem to harbor XMRV, which raises questions about its potential route of transmission. We established a model of infection in rhesus macaques inoculated with XMRV. In spite of the intravenous inoculation, all infected macaques exhibited readily detectable XMRV signal in the reproductive tract of all 4 males and 1 female during both acute and chronic infection stages. XMRV showed explosive growth in the acini of prostate during acute but not chronic infection. In seminal vesicles, epididymis, and testes, XMRV protein production was detected throughout infection in interstitial or epithelial cells. In the female monkey, epithelial cells in the cervix and vagina were also positive for XMRV gag. The ready detection of XMRV in the reproductive tract of male and female macaques infected intravenously suggests the potential for sexual transmission for XMRV

Characterization of antibodies elicited by XMRV infection and development of immunoassays useful for epidemiologic studies

<p>Abstract</p> <p>Background</p> <p>Xenotropic Murine Leukemia Virus-related Virus (XMRV) is a human gammaretrovirus recently identified in prostate cancer tissue and in lymphocytes of patients with chronic fatigue syndrome. To establish the etiologic role of XMRV infection in human disease requires large scale epidemiologic studies. Development of assays to detect XMRV-specific antibodies would greatly facilitate such studies. However, the nature and kinetics of the antibody response to XMRV infection have yet to be determined.</p> <p>Results</p> <p>Three rhesus macaques were infected with XMRV to determine the dynamics of the antibody responses elicited by infection with XMRV. All macaques developed antibodies to XMRV during the second week of infection, and the predominant responses were to the envelope protein gp70, transmembrane protein p15E, and capsid protein p30. In general, antibody responses to gp70 and p15E appeared early with higher titers than to p30, especially in the early period of seroconversion. Antibodies to gp70, p15E and p30 persisted to 158 days and were substantially boosted by re-infection, thus, were identified as useful serologic markers. Three high-throughput prototype assays were developed using recombinant proteins to detect antibodies to these viral proteins. Both gp70 and p15E prototype assays demonstrated 100% sensitivity by detecting all Western blot (WB) positive serial bleeds from the XMRV-infected macaques and good specificity (99.5-99.9%) with blood donors. Seroconversion sensitivity and specificity of the p30 prototype assay were 92% and 99.4% respectively.</p> <p>Conclusions</p> <p>This study provides the first demonstration of seroconversion patterns elicited by XMRV infection. The nature and kinetics of antibody responses to XMRV in primates were fully characterized. Moreover, key serologic markers useful for detection of XMRV infection were identified. Three prototype immunoassays were developed to detect XMRV-specific antibodies. These assays demonstrated good sensitivity and specificity; thus, they will facilitate large scale epidemiologic studies of XMRV infection in humans.</p

New Tools for Decomposition of Sea Floor Pressure Data - A Practical Comparison of Modern and Classical Approaches

In recent years more and more long-term broadband data sets are collected in geosciences. Therefore there is an urgent need of algorithms which semi-automatically analyse and decompose these data into separate periods which are associated with different processes. Often Fourier and Wavelet Transform is used to decompose the data into short and long period effects but these fail often because of their simplicity. In this paper we investigate the novel approaches Empircial Mode Decomposition and Sparse Decomposition for long-term sea floor pressure data analysis and compare them with the classical ones. Our results indicate that none of the methods fulfils all the requirements but Sparse Decomposition performed best except for computing efficiency.Comment: 20 pages, 2 tables, 7 figure