Water quality improvements offset the climatic debt for stream macroinvertebrates over twenty years

Many species are accumulating climatic debt as they fail to keep pace with increasing global temperatures. In theory, concomitant decreases in other stressors (e.g. pollution, fragmentation) could offset some warming effects, paying climatic debt with accrued environmental credit. This process may be occurring in many western European rivers. We fit a Markov chain model to ~20,000 macroinvertebrate samples from England and Wales, and demonstrate that despite large temperature increases 1991–2011, macroinvertebrate communities remained close to their predicted equilibrium with environmental conditions. Using a novel analysis of multiple stressors, an accumulated climatic debt of 0.64 (±0.13 standard error) °C of warming was paid by a water-quality credit equivalent to 0.89 (±0.04)°C of cooling. Although there is finite scope for mitigating additional climate warming in this way, water quality improvements appear to have offset recent temperature increases, and the concept of environmental credit may be a useful tool for communicating climate offsetting

Development of species distribution models and their application to birds in river habitats

1. Distribution models are used as management tools to predict species' distributions and quantify their habitat preferences. Numerous methodological issues require further development, which are explored using the distribution of birds along rivers as a model system in which there is a need to i) develop the quantification and analysis of variation in river habitat features and ii) better quantify species' habitat preferences for conservation and prediction. These themes were linked using a combination of the British Trust for Ornithology's Waterways Breeding Bird Survey (WBBS) and the Environment Agency's River Habitat Survey (RHS), along with similar data from upland Wales and the Himalayan mountains. 2. Training data are the starting point for distribution models and their properties can have profound effects. These issues were investigated via a literature review, which identified key factors including the type of predictors chosen, the approach to environmental sampling and spatial autocorrelation in distribution patterns. Recommendations are made that should optimise model quality, whilst making the most efficient use of available resources. 3. Testing the performance of distribution models is vital. Using a review of the available literature, highlighting weaknesses in current practice, and a case study using a Himalayan river bird, recommendations are made for improved practice. Bootstrapping and independent data should be used to assess overfitting and transportability, respectively. Accuracy statistics should facilitate inter-model comparisons, examining both discrimination and calibration. Nominal presence/absence predictions are problematic: information-theoretic methods may be the most useful approach. 4. Complex habitat data, such as RHS, may create a range of problems during statistical analyses unless the sample size is large. Data reduction, using methods such as principal components analysis (PCA), is an effective solution, but the resulting axes may be difficult to interpret. Using models built with Welsh river bird-RHS data, I compared the interpretability and predictive efficacy of PCA used in its conventional form against PCA preceded by the clustering of RHS variables that referred to the same ecological factors. The two approaches produced similar predictive performance but habitat indices produced by the latter were easier to interpret. A variant of PCA devised for qualitative data was also examined, and benefited RHS analyses involving ordinal variables. 5. Predictive models for 28 river birds, built with the WBBS, represent the first quantitative study linking detailed river habitat data with river bird distributions across the UK. Accuracy varied widely, with better performance for species associated with the river channel, rather than floodplain habitats, reflecting the relative coverage of these river features in RHS. By using variable clustering, the likelihood of species occurrences could be easily related to the observed habitat. 6. By utilising important methodological developments, this project provides important evidence that RHS forms an effective basis for relating many river birds to their habitats, and that when used in conjunction with the WBBS, could bring valuable benefits to river bird conservation. More generally, the work illustrates how RHS can describe variations in river structure and anthropogenic modification in a manner that is relevant to riverine organisms, along with transferable methods for describing and modelling the resulting relationships.EThOS - Electronic Theses Online ServiceGBUnited Kingdo

The forgotten flies:The importance of non-syrphid Diptera as pollinators

Bees, hoverflies and butterflies are taxa frequently studied as pollinators in agricultural and conservation contexts. Although there are many records of non-syrphid Diptera visiting flowers, they are generally not regarded as important pollinators. We use data from 30 pollen-transport networks and 71 pollinator-visitation networks to compare the importance of various flower-visiting taxa as pollen-vectors. We specifically compare non-syrphid Diptera and Syrphidae to determine whether neglect of the former in the literature is justified. We found no significant difference in pollen-loads between the syrphid and non-syrphid Diptera. Moreover, there was no significant difference in the level of specialization between the two groups in the pollen-transport networks, though the Syrphidae had significantly greater visitation evenness. Flower visitation data from 33 farms showed that non-syrphid Diptera made up the majority of the flower-visiting Diptera in the agricultural studies (on average 82% abundance and 73% species richness), and we estimate that non-syrphid Diptera carry 84% of total pollen carried by farmland Diptera. As important pollinators, such as bees, have suffered serious declines, it would be prudent to improve our understanding of the role of non-syrphid Diptera as pollinators

The impact of the invasive alien plant, impatiens glandulifera, on pollen transfer networks

Biological invasions are a threat to the maintenance of ecological processes, including pollination. Plant-flower visitor networks are traditionally used as a surrogated for pollination at the community level, despite they do not represent the pollination process, which takes place at the stigma of plants where pollen grains are deposited. Here we investigated whether the invasion of the alien plant Impatiens glandulifera (Balsaminaceae) affects pollen transfer at the community level. We asked whether more alien pollen is deposited on the stigmas of plants on invaded sites, whether deposition is affected by stigma type (dry, semidry and wet) and whether the invasion of I. glandulifera changes the structure of the resulting pollen transfer networks. We sampled stigmas of plants on 10 sites invaded by I. glandulifera (hereafter, balsam) and 10 non-invaded control sites. All 20 networks had interactions with balsam pollen, although significantly more balsam pollen was found on plants with dry stigmas in invaded areas. Balsam pollen deposition was restricted to a small subset of plant species, which is surprising because pollinators are known to carry high loads of balsam pollen. Balsam invasion did not affect the loading of native pollen, nor did it affect pollen transfer network properties; networks were modular and poorly nested, both of which are likely to be related to the specificity of pollen transfer interactions. Our results indicate that pollination networks become more specialized when moving from the flower visitation to the level of pollen transfer networks. Therefore, caution is needed when inferring pollination from patterns of insect visitation or insect pollen loads as the relationship between these and pollen deposition is not straightforward. © 2015 Emer et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited

Dynamics of laterally-coupled pairs of spin-VCSELs

A newly-developed normal mode model of laser dynamics in a generalised array of waveguides is applied to extend the spin-flip model (SFM) to pairs of evanescently-coupled spin-VCSELS. The effect of high birefringence is explored, revealing new dynamics and regions of bistability. It is shown that optical switching of the polarisation states of the lasers may be controlled through the optical pump and that, under certain conditions, the polarisation of one laser may be switched by controlling the intensity and polarisation in the other

Interaction generalisation and demographic feedbacks drive the resilience of plant–insect networks to extinctions

Understanding the processes driving ecological resilience, that is the extent to which systems retain their structure while absorbing perturbations, is a central challenge for theoretical and applied ecologists. Plant–insect assemblages are well-suited for the study of ecological resilience as they are species-rich and encompass a variety of ecological interactions that correspond to essential ecosystem functions. Mechanisms affecting community response to perturbations depend on both the natural history and structure of ecological interactions. Natural history attributes of the interspecific interactions, for example whether they are mutualistic or antagonistic, may affect the ecological resilience by controlling the demographic feedbacks driving ecological dynamics at the community level. Interaction generalisation may also affect resilience, by defining opportunities for interaction rewiring, the extent to which species are able to switch interactions in fluctuating environments. These natural history attributes may also interact with network structure to affect ecological resilience. Using adaptive network models, we investigated the resilience of plant–pollinator and plant–herbivore networks to species loss. We specifically investigated how fundamental natural history differences between these systems, namely the demographic consequences of the interaction and their level of generalisation—mediating rewiring opportunities—affect the resilience of dynamic ecological networks to extinctions. We also create a general benchmark for the effect of network structure on resilience simulating extinctions on theoretical networks with controlled structures. When network structure was static, pollination networks were less resilient than herbivory networks; this is related to their high levels of nestedness and the reciprocally positive feedbacks that define mutualisms, which made co-extinction cascades more likely and longer in plant–pollinator assemblages. When considering interaction rewiring, the high generalisation and the structure of pollination networks boosted their resilience to extinctions, which approached those of herbivory networks. Simulation results using theoretical networks suggested that the empirical structure of herbivory networks may protect them from collapse. Elucidating the ecological and evolutionary processes driving interaction rewiring is key to understanding the resilience of plant–insect assemblages. Accounting for rewiring requires ecologists to combine natural history with network models that incorporate feedbacks between species abundances, traits and interactions. This combination will elucidate how perturbations propagate at community level, reshaping biodiversity structure and ecosystem functions

Turnover in floral composition explains species diversity and temporal stability in the nectar supply of urban residential gardens

Residential gardens are a valuable habitat for insect pollinators worldwide, but differences in individual gardening practices substantially affect their floral composition. It is important to understand how the floral resource supply of gardens varies in both space and time so we can develop evidence‐based management recommendations to support pollinator conservation in towns and cities. We surveyed 59 residential gardens in the city of Bristol, UK, at monthly intervals from March to October. For each of 472 garden surveys, we combined floral abundances with nectar sugar data to quantify the nectar production of each garden, investigating the magnitude, temporal stability, and diversity and composition of garden nectar supplies. We found that individual gardens differ markedly in the quantity of nectar sugar they supply (from 2 to 1,662 g), and nectar production is higher in more affluent neighbourhoods, but not in larger gardens. Nectar supply peaks in July (mid‐summer), when more plant taxa are in flower, but temporal patterns vary among individual gardens. At larger spatial scales, temporal variability averages out through the portfolio effect, meaning insect pollinators foraging across many gardens in urban landscapes have access to a relatively stable and continuous supply of nectar through the year. Turnover in species composition among gardens leads to an extremely high overall plant richness, with 636 taxa recorded flowering. The nectar supply is dominated by non‐natives, which provide 91% of all nectar sugar, while shrubs are the main plant life form contributing to nectar production (58%). Two‐thirds of nectar sugar is only available to relatively specialised pollinators, leaving just one‐third that is accessible to all. Synthesis and applications. By measuring nectar supply in residential gardens, our study demonstrates that pollinator‐friendly management, affecting garden quality, is more important than the size of a garden, giving every gardener an opportunity to contribute to pollinator conservation in urban areas. For gardeners interested in increasing the value of their land to foraging pollinators, we recommend planting nectar‐rich shrubs with complementary flowering periods and prioritising flowers with an open structure in late summer and autumn

Spatial and temporal behavioural responses of wild cattle to tropical forest degradation

<div><p>Identifying the consequences of tropical forest degradation is essential to mitigate its effects upon forest fauna. Large forest-dwelling mammals are often highly sensitive to environmental perturbation through processes such as fragmentation, simplification of habitat structure, and abiotic changes including increased temperatures where the canopy is cleared. Whilst previous work has focused upon species richness and rarity in logged forest, few look at spatial and temporal behavioural responses to forest degradation. Using camera traps, we explored the relationships between diel activity, behavioural expression, habitat use and ambient temperature to understand how the wild free-ranging Bornean banteng (<i>Bos javanicus lowi</i>) respond to logging and regeneration. Three secondary forests in Sabah, Malaysian Borneo were studied, varying in the time since last logging (6–23 years). A combination of generalised linear mixed models and generalised linear models were constructed using >36,000 trap-nights. Temperature had no significant effect on activity, however it varied markedly between forests, with the period of intense heat shortening as forest regeneration increased over the years. Bantengs regulated activity, with a reduction during the wet season in the most degraded forest (z = -2.6, Std. Error = 0.13, p = 0.01), and reductions during midday hours in forest with limited regeneration, however after >20 years of regrowth, activity was more consistent throughout the day. Foraging and use of open canopy areas dominated the activity budget when regeneration was limited. As regeneration advanced, this was replaced by greater investment in travelling and using a closed canopy. Forest degradation modifies the ambient temperature, and positively influences flooding and habitat availability during the wet season. Retention of a mosaic of mature forest patches within commercial forests could minimise these effects and also provide refuge, which is key to heat dissipation and the prevention of thermal stress, whilst retention of degraded forest could provide forage.</p></div

Testing the ecosystem service cascade framework for Atlantic salmon

Aligning nature protection with human well-being for the UN Sustainable Development Goals implies that conservation monitoring should indicate the sustainability of ecosystem services (ES). Here we test the value of the ES cascade framework using national, multi-decadal data for an iconic freshwater fish, the Atlantic salmon Salmo salar. For the first time, we assemble all long-term monitoring data for England and Wales along the ES cascade for this species from resource to benefit: juvenile density to measure the biological resource, returning adult numbers to measure potential ES use, and rod catches and angling effort as measures of actual ES use. We aimed to understand how the ES cascade framework reconciled conservation with ES sustainability targets. Only some linkages along the ES cascade could be evidenced: in catchments where juveniles declined, rod catches also generally decreased, but angling effort declined everywhere irrespective of the biological resource trends. We suggest that i) programmes focused on juvenile monitoring provide an early-warning system for ES provision as well as nature conservation, ii) the ES cascade framework can reconcile nature conservation and ES sustainability if monitoring efforts link biological resources fully to the ES, and ES monitoring explicitly relates biological resources to human use

Using natural marks in a spatially explicit capture-recapture framework to estimate preliminary population density of cryptic endangered wild cattle in Borneo

The behaviour of cryptic tropical forest ungulates that are not identifiable from unique coat colour and patterns often impedes detectability and investigations of population density, which underpin conservation plans. The shy and endangered Bornean banteng has a declining trend, but quantifying this requires sufficient detections to estimate robust population parameters, which are currently unavailable. Using intensive camera trapping and individual identification from natural marks by two observers, we estimated the baseline population density of Bornean bantengs in Malua and Tabin forests in Sabah (Malaysian Borneo) using a spatially explicit capture-recapture framework. We also investigated the efficacy of two commonly-used survey methods (camera trapping and signs) that have previously failed to detect the species, by contrasting capture frequencies to estimate the probability of odds of capture. Density estimates and simulated 95% confidence limits were exceptionally low in both forests and with negligible differences arising from small disparities in the interpretation of natural marks. Density in Malua ranged from 0.5 individuals per 100 km2 (0.21–1.48) to 0.56 (0.15–2.09), and in Tabin between 0.61 (0.32–1.16) to 0.95 (0.54–1.66). The capture odds were significantly greater for camera traps (X2 = 20, p  4, p < 0.001); sign survey efficacy declined at higher elevations and under dense canopy. Using natural marks for individual identification was resource-demanding, but provided robust population density parameters for an otherwise challenging species to detect. Extremely low-density estimates of Bornean bantengs highlights the urgency for greater control of poaching, which is almost certainly decimating the population. Rapid implementation of actions to mitigate against further losses are essential for halting the declining trend. The estimation of density parameters in other forests in Sabah that contain bantengs would set the context for our density estimates. It would additionally provide a basis for long-term population monitoring, and facilitate investigations into the effectiveness of enforcement strategies