Dynamical Locking of the Chiral and the Deconfinement Phase Transition in QCD

We study the fixed-point structure of four-fermion interactions in two-flavor QCD with Nc colors close to the finite-temperature phase boundary. In particular, we analyze how the fixed-point structure of four-fermion interactions is related to the confining dynamics in the gauge sector. We show that there exists indeed a mechanism which dynamically locks the chiral phase transition to the deconfinement phase transition. This mechanism allows us to determine a window for the values of physical observables in which the two phase transitions lie close to each other.Comment: 14 pages, 5 figure

Thermodynamically Stable One-Component Metallic Quasicrystals

Classical density-functional theory is employed to study finite-temperature trends in the relative stabilities of one-component quasicrystals interacting via effective metallic pair potentials derived from pseudopotential theory. Comparing the free energies of several periodic crystals and rational approximant models of quasicrystals over a range of pseudopotential parameters, thermodynamically stable quasicrystals are predicted for parameters approaching the limits of mechanical stability of the crystalline structures. The results support and significantly extend conclusions of previous ground-state lattice-sum studies.Comment: REVTeX, 13 pages + 2 figures, to appear, Europhys. Let

Chiral Quasicrystalline Order and Dodecahedral Geometry in Exceptional Families of Viruses

On the example of exceptional families of viruses we i) show the existence of a completely new type of matter organization in nanoparticles, in which the regions with a chiral pentagonal quasicrystalline order of protein positions are arranged in a structure commensurate with the spherical topology and dodecahedral geometry, ii) generalize the classical theory of quasicrystals (QCs) to explain this organization, and iii) establish the relation between local chiral QC order and nonzero curvature of the dodecahedral capsid faces.Comment: 8 pages, 3 figure

Neutrinos from Accreting Neutron Stars

The magnetospheres of accreting neutron stars develop electrostatic gaps with huge potential drops. Protons and ions, accelerated in these gaps along the dipolar magnetic field lines to energies greater than 100 TeV, can impact onto a surrounding accretion disc. A proton-induced cascade so develops, and $\nu$-emission is produced from charged pion decays. Using GEANT4, a computer code that tracks particles produced in high energy collisions, we have calculated the resulting $\nu$-spectrum with extensive disc shower simulations. We show that the $\nu$-spectrum produced out of the proton beam is a power law. We use this result to propose accretion-powered X-ray binaries (with highly magnetized neutron stars) as a new population of point-like $\nu$-sources for km-scale detectors, such as ICECUBE. As a particular example we discuss the case of A0535+26. We show that ICECUBE should find A0535+26 to be a periodic $\nu$-source: one for which the formation and loss of its accretion disc can be fully detected. Finally, we briefly comment on the possibility that smaller telescopes, like AMANDA, could also detect A0535+26 by folding observations with the orbital period.Comment: 7 pages, 5 figures. Updates to match accepted version in Astrophys.

Icosahedral multi-component model sets

A quasiperiodic packing Q of interpenetrating copies of C, most of them only partially occupied, can be defined in terms of the strip projection method for any icosahedral cluster C. We show that in the case when the coordinates of the vectors of C belong to the quadratic field Q[\sqrt{5}] the dimension of the superspace can be reduced, namely, Q can be re-defined as a multi-component model set by using a 6-dimensional superspace.Comment: 7 pages, LaTeX2e in IOP styl

The Entropy of Square-Free Words

Finite alphabets of at least three letters permit the construction of square-free words of infinite length. We show that the entropy density is strictly positive and derive reasonable lower and upper bounds. Finally, we present an approximate formula which is asymptotically exact with rapid convergence in the number of letters.Comment: 18 page

Identifying and Indexing Icosahedral Quasicrystals from Powder Diffraction Patterns

We present a scheme to identify quasicrystals based on powder diffraction data and to provide a standardized indexing. We apply our scheme to a large catalog of powder diffraction patterns, including natural minerals, to look for new quasicrystals. Based on our tests, we have found promising candidates worthy of further exploration.Comment: 4 pages, 1 figur

The variability behavior of CoRoT M-giant Stars

For 6 years the Convection, Rotation, and Planetary Transits (CoRoT) space mission has acquired photometric data from more than one hundred thousand point sources towards and directly opposite from the inner and outer regions of the Galaxy. The high temporal resolution of the CoRoT data combined with the wide time span of the observations has enabled the study of short and long time variations in unprecedented detail. From the initial sample of 2534 stars classified as M-giants in the CoRoT databasis, we selected 1428 targets that exhibit well defined variability, using visual inspection. The variability period and amplitude of C1 stars (stars having Teff < 4200 K) were computed using Lomb-Scargle and harmonic fit methods. The trends found in the V-I vs J-K color-color diagram are in agreement with standard empirical calibrations for M-giants. The sources located towards the inner regions of the Galaxy are distributed throughout the diagram while the majority of the stars towards the outer regions of the Galaxy are spread between the calibrations of M-giants and the predicted position for Carbon stars. The stars classified as supergiants follow a different sequence from the one found for giant stars. We also performed a KS test of the period and amplitude of stars towards the inner and outer regions of the Galaxy. We obtained a low probability that the two samples come from the same parent distribution. The observed behavior of the period-amplitude and period-Teff diagrams are, in general, in agreement with those found for Kepler sources and ground based photometry, with pulsation being the dominant cause responsible for the observed modulation. We also conclude that short-time variations on M-Giant stars do not exist orare very rare and the few cases we found are possibly related to biases or background stars.Comment: 11 pages, 6 figure

Affine extension of noncrystallographic Coxeter groups and quasicrystals

Unique affine extensions H^{\aff}_2, H^{\aff}_3 and H^{\aff}_4 are determined for the noncrystallographic Coxeter groups $H_2$, $H_3$ and $H_4$. They are used for the construction of new mathematical models for quasicrystal fragments with 10-fold symmetry. The case of H^{\aff}_2 corresponding to planar point sets is discussed in detail. In contrast to the cut-and-project scheme we obtain by construction finite point sets, which grow with a model specific growth parameter.Comment: (27 pages, to appear in J. Phys. A

Norine, the knowledgebase dedicated to nonribosomal peptides, is now open to crowdsourcing

International audienceSince its creation in 2006, Norine remains the unique knowledgebase dedicated to non-ribosomal pep-tides (NRPs). These secondary metabolites, produced by bacteria and fungi, harbor diverse interesting biological activities (such as antibiotic, anti-tumor, siderophore or surfactant) directly related to the diversity of their structures. The Norine team goal is to collect the NRPs and provide tools to analyze them efficiently. We have developed a user-friendly interface and dedicated tools to provide a complete bioinformatics platform. The knowledgebase gathers abundant and valuable annotations on more than 1100 NRPs. To increase the quantity of described NRPs and improve the quality of associated annotations , we are now opening Norine to crowdsourc-ing. We believe that contributors from the scientific community are the best experts to annotate the NRPs they work on. We have developed MyNorine to facilitate the submission of new NRPs or modifications of stored ones. This article presents MyNorine and other novelties of Norine interface released since the first publication. Norine is freely accessible from the following URL: http://bioinfo.lifl.fr/NRP