Colony size predicts division of labour in Attine ants

Division of labour is central to the ecological success of eusocial insects, yet the evolutionary factors driving increases in complexity in division of labour are little known. The size–complexity hypothesis proposes that, as larger colonies evolve, both non-reproductive and reproductive division of labour become more complex as workers and queens act to maximize inclusive fitness. Using a statistically robust phylogenetic comparative analysis of social and environmental traits of species within the ant tribe Attini, we show that colony size is positively related to both non-reproductive (worker size variation) and reproductive (queen–worker dimorphism) division of labour. The results also suggested that colony size acts on non-reproductive and reproductive division of labour in different ways. Environmental factors, including measures of variation in temperature and precipitation, had no significant effects on any division of labour measure or colony size. Overall, these results support the size–complexity hypothesis for the evolution of social complexity and division of labour in eusocial insects. Determining the evolutionary drivers of colony size may help contribute to our understanding of the evolution of social complexity

Colony size predicts division of labour in Attine ants

Division of labour is central to the ecological success of eusocial insects, yet the evolutionary factors driving increases in complexity in division of labour are little known. The size–complexity hypothesis proposes that, as larger colonies evolve, both non-reproductive and reproductive division of labour become more complex as workers and queens act to maximize inclusive fitness. Using a statistically robust phylogenetic comparative analysis of social and environmental traits of species within the ant tribe Attini, we show that colony size is positively related to both non-reproductive (worker size variation) and reproductive (queen–worker dimorphism) division of labour. The results also suggested that colony size acts on non-reproductive and reproductive division of labour in different ways. Environmental factors, including measures of variation in temperature and precipitation, had no significant effects on any division of labour measure or colony size. Overall, these results support the size–complexity hypothesis for the evolution of social complexity and division of labour in eusocial insects. Determining the evolutionary drivers of colony size may help contribute to our understanding of the evolution of social complexity

Low-frequency vibrational spectrum of mean-field disordered systems

We study a recently introduced and exactly solvable mean-field model for the density of vibrational states D(ω) of a structurally disordered system. The model is formulated as a collection of disordered anharmonic oscillators, with random stiffness κ drawn from a distribution p(κ), subjected to a constant field h and interacting bilinearly with a coupling of strength J. We investigate the vibrational properties of its ground state at zero temperature. When p(κ) is gapped, the emergent D(ω) is also gapped, for small J. Upon increasing J, the gap vanishes on a critical line in the (h, J) phase diagram, whereupon replica symmetry is broken. At small h, the form of this pseudogap is quadratic, D(ω) ~ ω2, and its modes are delocalized, as expected from previously investigated mean-field spin glass models. However, we determine that for large enough h, a quartic pseudogap D(ω) ~ ω4, populated by localized modes, emerges, the two regimes being separated by a special point on the critical line. We thus uncover that mean-field disordered systems can generically display both a quadratic-delocalized and a quartic-localized spectrum at the glass transition.</p

fuzzySim: applying fuzzy logic to binary similarity indices in ecology

Binary similarity indices are widely used in ecology, for example for detecting associations between species occurrence patterns, comparing regional and temporal species assemblages, and assessing beta diversity patterns, including spatial and temporal species loss and turnover. Such indices have widespread applications in biogeography, global change biology and biodiversity conservation. Similarity indices are commonly calculated upon binary presence/absence (or sometimes modelled suitable/unsuitable) data, which are generally incomplete and more categorical than their underlying natural patterns. Probable false absences are disregarded, amplifying the effects of data deficiencies and the scale dependence of the results. Fuzzy occurrence data, with a degree of uncertainty attributed to localities where presence or absence cannot be safely assigned, could better reflect species distributions, compensating for incomplete knowledge and methodological errors. Similarity indices would therefore also benefit from accommodating such fuzzy data directly. This study proposes fuzzy versions of the binary similarity indices most commonly used in ecology, so that they can be directly applied to continuous (fuzzy) rather than binary occurrence values, thus producing more realistic similarity assessments. Fuzzy occurrence can be obtained with several methods, some of which are also provided. The procedure is robust to data source disparities, gaps or other errors in species occurrence records, even for restricted species for which slight inaccuracies can affect substantial parts of their range. The method is implemented in a free and open-source software package, fuzzySim, which is available for the R statistical software and under implementation for the QGIS geographic information system. It is provided with sample data and an illustrated tutorial suitable for non-experienced users

Isolation and Expansion of Muscle Precursor Cells from Human Skeletal Muscle Biopsies

One of the major issues concerning human skeletal muscle progenitor cells is represented by the efficient isolation and in vitro expansion of cells retaining the ability to proliferate, migrate and differentiate once transplanted. Here we describe a method (1) effective in obtaining human muscle precursor cells both from fresh and frozen biopsies coming from different muscles, (2) selective to yield cells uniformly positive for CD56 and negative for CD34 without FACS sorting, (3) reliable in maintaining proliferative and in vitro differentiative capacity up to passage 10

Isolation and Expansion of Muscle Precursor Cells from Human Skeletal Muscle Biopsies

One of the major issues concerning human skeletal muscle progenitor cells is represented by the efficient isolation and in vitro expansion of cells retaining the ability to proliferate, migrate and differentiate once transplanted. Here we describe a method (1) effective in obtaining human muscle precursor cells both from fresh and frozen biopsies coming from different muscles, (2) selective to yield cells uniformly positive for CD56 and negative for CD34 without FACS sorting, (3) reliable in maintaining proliferative and in vitro differentiative capacity up to passage 10

Marvels and Pitfalls of the Langevin Algorithm in Noisy High-Dimensional Inference

Gradient-descent-based algorithms and their stochastic versions have widespread applications in machine learning and statistical inference. In this work, we carry out an analytic study of the performance of the algorithm most commonly considered in physics, the Langevin algorithm, in the context of noisy high-dimensional inference. We employ the Langevin algorithm to sample the posterior probability measure for the spiked mixed matrix-tensor model. The typical behavior of this algorithm is described by a system of integrodifferential equations that we call the Langevin state evolution, whose solution is compared with the one of the state evolution of approximate message passing (AMP). Our results show that, remarkably, the algorithmic threshold of the Langevin algorithm is suboptimal with respect to the one given by AMP. This phenomenon is due to the residual glassiness present in that region of parameters. We also present a simple heuristic expression of the transition line, which appears to be in agreement with the numerical results

Stendhal : le théâtre avant le roman, le roman contre le théâtre ?

Le théâtre de Stendhal, qui l’a pourtant beaucoup occupé de son adolescence à l’âge mûr, est traditionnellement considéré comme un échec. Il ne trouverait ainsi son épanouissement que dans la forme romanesque à partir de la fin des années 1820. Or la situation est en réalité plus compliquée. De fait, certains de ses projets ne déparent pas face aux pièces jouées à son époque, et le jeune homme se montre dans ses jeunes années vraiment persuadé de la supériorité du genre dramatique sur tous les autres, au point d’envisager de transposer des romans célèbres au théâtre ou du moins s’en inspirer. D’autre part, il faut semble-t-il moins opposer que rapprocher théâtre et roman, ce dernier s’immisçant dans plusieurs de ses projets dramaturgiques. C’est donc à regret, à cause d’une défaillance de l’intérêt du public pour la comédie qu’il renonce à cette dernière, même s’il est persuadé que les générations suivantes reviendront au théâtre. Enfin, non seulement Stendhal emploie une méthode analogue pour construire ses pièces et ses romans, mais ces derniers se caractérisent par leur théâtralité, avec des scènes très visuelles où les dialogues prolifèrent, et c’est dans le genre romanesque qu’il arrive enfin à trouver le bon ton comique qu’il n’a pas réussi à atteindre dans ses projets dramaturgiques

Proteomic and ionomic profiling reveals significant alterations of protein expression and calcium homeostasis in cystic fibrosis cells

Cystic fibrosis (CF) is an autosomal recessive disorder associated with mutations of the cystic fibrosis transmembrane conductance regulator (CFTR) gene and defective chloride transport across the epithelial cell membranes. Abnormal epithelial ion transport is the primary cause of persistent airway infections and chronic inflammation in CF patients. In order to gain further insight into the mechanisms of epithelial dysfunctions linked to CFTR mutations, we performed and integrated proteomic and ionomic analysis of human bronchial epithelial IB3-1 cells and compared them with a CFTR-complemented isogenic cell line (C38). Aside from changes that were consistent with known effects related to CFTR mutations, such as differences in glycolytic and gluconeogenic pathways and unfolded protein responses, differential proteomics highlighted significant alteration of protein expression and, in particular, of the 14-3-3 signalling pathway that is known to be involved in cellular calcium (Ca) homeostasis. Of note, restoring chloride efflux by acting on Ca cellular homeostasis has been shown to be a promising therapeutic intervention for CF. Ionomic analysis showed significant changes in the IB3-1 element profile compared with C38 cells and in particular we observed an increase of intracellular Ca that significantly correlates with intracellular zinc (Zn) levels, suggesting a synergistic role of Ca and Zn influx. This finding is particularly intriguing because Zn has been reported to be effective in CF treatment increasing Ca influx. Taken together, our proteomic and ionomic data reveal that CFTR mutation sets in motion endogenous mechanisms counteracting impaired chloride transport mainly acting on epithelial ion transport and increasing intracellular Ca, suggesting potential links between protein expression and this response