Stable isotopes demonstrate seasonally stable benthic-pelagic coupling as newly-fixed nutrients are rapidly transferred through food chains in an estuarine fish community

Seasonal differences in the availability of resources potentially result in food web architecture also varying through time. Stable isotope analyses are a logistically simple but powerful tool for inferring trophic interactions and food web structure, but relatively few studies quantify seasonal variations in food web structure or nutrient flux across multiple trophic levels. We determined the temporal dynamics in stable isotope compositions (carbon, nitrogen and sulfur) of a fish community from a highly seasonal, temperate estuary sampled monthly over a full annual cycle. Sulfur isotope values in fish tissues discriminated among consumers exploiting pelagic and benthic resources but showed no seasonal variation. This implied limited change in the relative consumption of pelagic and benthic resources by the fish community over the study period despite major seasonal changes in phytoplankton biomass. Conversely carbon and nitrogen isotope values exhibited seasonality marked by the commencement of the spring phytoplankton bloom and peak chlorophyll concentration, with δ13C values following expected trends in phytoplankton growth physiology and variation in δ15N values coinciding with changes in major nitrogen sources to plankton between nitrate and ammonium. Isotope shifts in fish muscle were detected within two weeks of the peak spring phytoplankton bloom, suggesting a rapid trophic transfer of carbon and nitrogen along food chains within the estuarine food web during periods of high production. We therefore caution against the assumption that temporal averaging effectively dampens isotopic variability in tissues of higher trophic level animals in highly dynamic ecosystems such as temperate estuaries. This work highlights how stable isotope analyses can be combined with environmental data to gain broader understanding of ecosystem functioning, while emphasising the need for temporally appropriate sampling in stable isotope-based studies

Vitamin D associates with improved quality of life in participants with irritable bowel syndrome: outcomes from a pilot trial

Background: Vitamin D deficiency has been associated or implicated with the pathophysiology of the gastrointestinal conditions inflammatory bowel disease and colorectal cancer, as well as with depression. No trials or epidemiology studies to date have investigated a link with irritable bowel syndrome (IBS). A single case report has suggested a benefit in IBS of vitamin D supplementation. We hypothesised that IBS participants with vitamin D insufficiency would benefit from repletion in terms of their IBS symptoms. We undertook a pilot trial to provide data to support a power calculation and to justify a full trial. Methods: This was a randomised, double blinded, three-arm parallel design trial of vitamin D, placebo or a combination of vitamin D and probiotics. Participants were further stratified according to whether they were vitamin D replete or insufficient. Vitamin D status was determined by blood test at baseline and exit; IBS symptoms were assessed by validated questionnaire; dietary intakes were assessed by food frequency questionnaire. Results: A significant proportion of the IBS population were vitamin D deficient, such that the replete stratum could not be adequately recruited. There was a significant association in the baseline data between circulating vitamin D level and quality of life (“How much has IBS affected your life?”). Supplementation significantly improved vitamin D level versus placebo. IBS symptoms were not significantly improved in this pilot, although a power calculation was enabled from the intervention data. Conclusions: The IBS population exhibits significant levels of vitamin D insufficiency and would benefit from screening and possible supplementation. The impact of IBS on quality of life may be reduced by vitamin D level. Future trials should have a sample size of over 9

Single Spin Asymmetry ANA_N in Polarized Proton-Proton Elastic Scattering at s=200\sqrt{s}=200 GeV

We report a high precision measurement of the transverse single spin asymmetry $A_N$ at the center of mass energy $\sqrt{s}=200$ GeV in elastic proton-proton scattering by the STAR experiment at RHIC. The $A_N$ was measured in the four-momentum transfer squared $t$ range $0.003 \leqslant |t| \leqslant 0.035$ \GeVcSq, the region of a significant interference between the electromagnetic and hadronic scattering amplitudes. The measured values of $A_N$ and its $t$-dependence are consistent with a vanishing hadronic spin-flip amplitude, thus providing strong constraints on the ratio of the single spin-flip to the non-flip amplitudes. Since the hadronic amplitude is dominated by the Pomeron amplitude at this $\sqrt{s}$, we conclude that this measurement addresses the question about the presence of a hadronic spin flip due to the Pomeron exchange in polarized proton-proton elastic scattering.Comment: 12 pages, 6 figure

Spatial models of carbon, nitrogen and sulphur stable isotope distributions (isoscapes) across a shelf sea: An INLA approach

Spatial models of variation in the isotopic composition of structural nutrients across habitats (isoscapes) offer information on physical, biogeochemical and anthropogenic processes occurring across space, and provide a tool for retrospective assignment of animals or animal products to their foraging area or geographic origin. The isotopic differences among reference samples used to construct isoscapes may vary spatially and according to non‐spatial terms (e.g. sampling date, or among individual or species effects). Partitioning variance between spatially dependent and spatially independent terms is a critical but overlooked aspect of isoscape creation with important consequences for the design of studies collecting reference data for isoscape creation and the accuracy and precision of isoscape models.We introduce the use of integrated nested Laplace approximation (INLA) to construct isoscape models. Integrated nested Laplace approximation provides a computationally efficient framework to construct spatial models of isotopic variability explicitly addressing additional variation introduced by including multiple reference species (or other recognized sources of variance).We present carbon, nitrogen and sulphur isoscape models extending over c. 1 million km2 of the UK shelf seas. Models were built using seven different species of jellyfish as spatial reference data and a suite of environmental correlates. Compared to alternative isoscape prediction methods, INLA‐spatial isotope models show high spatial precision and reduced variance. We briefly discuss the likely biogeochemical explanations for the observed spatial isotope distributions. We show for the first time that sulphur isotopes display systematic spatial variation across open marine shelf seas and may therefore be a useful additional tool for marine spatial ecology.The INLA technique provides a promising tool for generating isoscape models and associated uncertainty surfaces where reference data are accompanied by multiple, quantifiable sources of uncertaint

Electrospray ionisation mass spectrometric analysis of lipid restructuring in the carp (Cyprinus carpio L.) during cold acclimation

Cold acclimation of carp from 30°C to 10°C causes a restructuring of liver microsomal phospholipids characterised by increased proportions of monounsaturated fatty acid in phosphatidylcholine (PC) and phosphatidylethanolamine (PE). Here, we have used electrospray ionisation mass spectrometry (ESI-MS) to determine the patterns of alteration to individual molecular species compositions of PC, PE and phosphatidylinositol (PI) in response to gradually decreasing temperature.The results demonstrate that cold induces precise changes to a limited number of phospholipid species, and that these changes are distinct and different for each phospholipid class. The major change for PC was increased 16:1/22:6, but for PE the species that increased was 18:1/22:6. By contrast, the PI species that increased during cold acclimation were characterised by an sn-1 monounsaturated fatty acid in combination with arachidonoyl or eicosapentaenoyl fatty acid at the sn-2 position. Analysis of acyl distribution indicates that cold only caused the accumulation of monounsaturated fatty acids at the sn-1 and not at the sn-2 position of phospholipids. These results highlight the tight and restricted range of modifications that membranes make to their phospholipid composition in response to thermal stress. <br/

CrystalGrower: a generic computer program for Monte Carlo modelling of crystal growth

A Monte Carlo crystal growth simulation tool,CrystalGrower, is described which is able to simultaneously model both the crystal habit and nanoscopic surface topography of any crystal structure under conditions of variable supersaturation or at equilibrium. This tool has been developed in order to permit the rapid simulation of crystal surface maps generated by scanning probe microscopies in combination with overall crystal habit. As the simulation is based upon a coarse graining at the nanoscopic level features such as crystal rounding at low supersaturation or undersaturation conditions are also faithfully reproduced.CrystalGrowerpermits the incorporation of screw dislocations with arbitrary Burgers vectors and also the investigation of internal point defects in crystals. The effect of growth modifiers can be addressed by selective poisoning of specific growth sites. The tool is designed for those interested in understanding and controlling the outcome of crystal growth through a deeper comprehension of the key controlling experimental parameters