427 research outputs found
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Binding to medium and long chain fatty acyls is a common property of HEAT and ARM repeat modules.
Covalent post-translational modification (PTM) of proteins with acyl groups of various carbon chain-lengths regulates diverse biological processes ranging from chromatin dynamics to subcellular localization. While the YEATS domain has been found to be a prominent reader of acetylation and other short acyl modifications, whether additional acyl-lysine reader domains exist, particularly for longer carbon chains, is unclear. Here, we employed a quantitative proteomic approach using various modified peptide baits to identify reader proteins of various acyl modifications. We discovered that proteins harboring HEAT and ARM repeats bind to lysine myristoylated peptides. Recombinant HEAT and ARM repeats bind to myristoylated peptides independent of the peptide sequence or the position of the myristoyl group. Indeed, HEAT and ARM repeats bind directly to medium- and long-chain free fatty acids (MCFA and LCFA). Lipidomic experiments suggest that MCFAs and LCFAs interact with HEAT and ARM repeat proteins in mammalian cells. Finally, treatment of cells with exogenous MCFAs and inhibitors of MCFA-CoA synthases increase the transactivation activity of the ARM repeat protein β-catenin. Taken together, our results suggest an unappreciated role for fatty acids in the regulation of proteins harboring HEAT or ARM repeats
Interactions of the Infrared bubble N4 with the surroundings
The physical mechanisms that induce the transformation of a certain mass of
gas in new stars are far from being well understood. Infrared bubbles
associated with HII regions have been considered to be good samples of
investigating triggered star formation. In this paper we report on the
investigation of the dust properties of the infrared bubble N4 around the HII
region G11.898+0.747, analyzing its interaction with its surroundings and star
formation histories therein, with the aim of determining the possibility of
star formation triggered by the expansion of the bubble. Using Herschel PACS
and SPIRE images with a wide wavelength coverage, we reveal the dust properties
over the entire bubble. Meanwhile, we are able to identify six dust clumps
surrounding the bubble, with a mean size of 0.50 pc, temperature of about 22 K,
mean column density of 1.7 cm, mean volume density of
about 4.4 cm, and a mean mass of 320 . In
addition, from PAH emission seen at 8 m, free-free emission detected at 20
cm and a probability density function in special regions, we could identify
clear signatures of the influence of the HII region on the surroundings. There
are hints of star formation, though further investigation is required to
demonstrate that N4 is the triggering source.Comment: Accepted by ApJ (16 pages, 11 figures, 9 tables
Electric-field-induced alignment of electrically neutral disk-like particles: modelling and calculation
This work reveals a torque from electric field to electrically neutral flakes that are suspended in a higher electrical conductive matrix. The torque tends to rotate the particles toward an orientation with its long axis parallel to the electric current flow. The alignment enables the anisotropic properties of tiny particles to integrate together and generate desirable macroscale anisotropic properties. The torque was obtained from thermodynamic calculation of electric current free energy at various microstructure configurations. It is significant even when the electrical potential gradient becomes as low as 100 v/m. The changes of electrical, electroplastic and thermal properties during particles alignment were discussed
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SETD3 is an actin histidine methyltransferase that prevents primary dystocia.
For more than 50Â years, the methylation of mammalian actin at histidine 73 has been known to occur1. Despite the pervasiveness of His73 methylation, which we find is conserved in several model animals and plants, its function remains unclear and the enzyme that generates this modification is unknown. Here we identify SET domain protein 3 (SETD3) as the physiological actin His73 methyltransferase. Structural studies reveal that an extensive network of interactions clamps the actin peptide onto the surface of SETD3 to orient His73 correctly within the catalytic pocket and to facilitate methyl transfer. His73 methylation reduces the nucleotide-exchange rate on actin monomers and modestly accelerates the assembly of actin filaments. Mice that lack SETD3 show complete loss of actin His73 methylation in several tissues, and quantitative proteomics analysis shows that actin His73 methylation is the only detectable physiological substrate of SETD3. SETD3-deficient female mice have severely decreased litter sizes owing to primary maternal dystocia that is refractory to ecbolic induction agents. Furthermore, depletion of SETD3 impairs signal-induced contraction in primary human uterine smooth muscle cells. Together, our results identify a mammalian histidine methyltransferase and uncover a pivotal role for SETD3 and actin His73 methylation in the regulation of smooth muscle contractility. Our data also support the broader hypothesis that protein histidine methylation acts as a common regulatory mechanism
Infall Signatures in a Prestellar Core embedded in the High-Mass 70 m Dark IRDC G331.372-00.116
Using Galactic Plane surveys, we have selected a massive (1200 M),
cold (14 K) 3.6-70 m dark IRDC G331.372-00.116. This IRDC has the
potential to form high-mass stars and, given the absence of current star
formation signatures, it seems to represent the earliest stages of high-mass
star formation. We have mapped the whole IRDC with the Atacama Large
Millimeter/submillimeter Array (ALMA) at 1.1 and 1.3 mm in dust continuum and
line emission. The dust continuum reveals 22 cores distributed across the IRDC.
In this work, we analyze the physical properties of the most massive core,
ALMA1, which has no molecular outflows detected in the CO (2-1), SiO (5-4), and
HCO (3-2) lines. This core is relatively massive ( = 17.6 M),
subvirialized (virial parameter ), and is barely
affected by turbulence (transonic Mach number of 1.2). Using the HCO (3-2)
line, we find the first detection of infall signatures in a relatively massive,
prestellar core (ALMA1) with the potential to form a high-mass star. We
estimate an infall speed of 1.54 km s and a high accretion rate of 1.96
10 M yr. ALMA1 is rapidly collapsing, out of
virial equilibrium, more consistent with competitive accretion scenarios rather
than the turbulent core accretion model. On the other hand, ALMA1 has a mass
6 times larger than the clumps Jeans mass, being in an intermediate mass
regime ( 30 M), contrary to what both the
competitive accretion and turbulent core accretion theories predict.Comment: 13 Pages, 5 Figures, 3 Table
INvestigations of massive Filaments ANd sTar formation (INFANT). I. Core Identification and Core Mass Function
Filamentary structures are ubiquitously found in high-mass star-forming
clouds. To investigate the relationship between filaments and star formation,
we carry out the INFANT (INvestigations of massive Filaments ANd sTar
formation) survey, a multi-scale, multi-wavelength survey of massive
filamentary clouds with ALMA band 3/band 6 and VLA K band. In this first paper,
we present the ALMA band 6 continuum observations toward a sample of 8
high-mass star forming filaments. We covered each target with approximately
rectangular mosaic field of view with two 12-m array configurations, achieving
an angular resolution of 0.6" (2700 AU at 4.5 kpc) and a continuum rms of
0.1 mJy/beam (0.06 Msun in gas mass assuming 15 K). We identify
cores using the getsf and astrodendro and find the former is more robust in
terms of both identification and measuring flux densities. We identify in total
183 dense cores (15--36 cores in each cloud) and classify their star formation
states via outflow and warm gas tracers. The protostellar cores are
statistically more massive than the prestellar cores, possibly indicating
further accretion onto cores after formation of protostars. For the high-mass
end ( 1.5 Msun) of the core mass function (CMF) we derive a
power-law index of 1.15 0.12 for the whole sample, and 1.70
0.25 for the prestellar population. We also find a steepening trend in CMF with
cloud evolution (0.89 0.15 for the young group v.s. 1.44 0.25
for the evolved group) and discuss its implication for cluster formation.Comment: 25 pages, 8 figures, accepted for Ap
The ALMA Survey of 70 Dark High-mass Clumps in Early Stages (ASHES). II: Molecular Outflows in the Extreme Early Stages of Protocluster Formation
We present a study of outflows at extremely early stages of high-mass star
formation obtained from the ALMA Survey of 70 dark High-mass clumps
in Early Stages (ASHES). Twelve massive 3.670 dark prestellar
clump candidates were observed with the Atacama Large Millimeter/submillimeter
Array (ALMA) in Band 6. Forty-three outflows are identified toward 41 out of
301 dense cores using the CO and SiO emission lines, yielding a detection rate
of 14%. We discover 6 episodic molecular outflows associated with low- to
high-mass cores, indicating that episodic outflows (and therefore episodic
accretion) begin at extremely early stages of protostellar evolution for a
range of core masses. The time span between consecutive ejection events is much
smaller than those found in more evolved stages, which indicates that the
ejection episodicity timescale is likely not constant over time. The estimated
outflow dynamical timescale appears to increase with core masses, which likely
indicates that more massive cores have longer accretion timescales than less
massive cores. The lower accretion rates in these 70 dark objects
compared to the more evolved protostars indicate that the accretion rates
increase with time. The total outflow energy rate is smaller than the turbulent
energy dissipation rate, which suggests that outflow induced turbulence cannot
sustain the internal clump turbulence at the current epoch. We often detect
thermal SiO emission within these 70 dark clumps that is unrelated
to CO outflows. This SiO emission could be produced by collisions, intersection
flows, undetected protostars, or other motions.Comment: 32 pages, 9 figures, 4 tables, accepted for publication in Ap
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