1,023 research outputs found
PTFE-Doped CeO2 Films: Synthesis, Characterization and Properties
Multi-functional hybrid films were developed by doping PTFE into CeO2 by co-sputtering of CeO2 and PTFE targets. The hybrid films formed on borosilicate glass substrate containing from 5 to 15 vol. % PTFE in CeO2 showed UV shielding, high indentation hardness, hydrophobicity, optical transmittance in visible light, and high bending crack resistance. Optical properties of 100 nm thick CeO2 -5 vol. % PTFE film revealed UV light shielding of more than 80 % at 380 nm and visible light transmittance higher than 80 %. Indentation hardness measured under the load of 0.001mN was more than 16,000N/mm2 of 2.7 times higher than the glass substrate. No crack in the film was observed by bending 1.5 cm in diameter. Furthermore, the hydrophobic surface property was evaluated by the water contact angle to be higher than 90 degrees. Preliminary characterization of the CeO2-PTFE film using XPS and XMA revealed that chemical states of F in sputter doped PTFE in CeO2 can be considered to exist as C-F and Ce-F compounds. On the other hand, chemical states of Ce changed partially from Ce+4 (CeO2) to Ce+3 (Ce2O3 or CeF3) with increasing doped PTFEF in the film.In this rapid communication, we preliminary described the optical, mechanical and chemical properties of newly developed hybrid CeO2-PTFE films prepared by sputtering
A niche-mimicking polymer hydrogel-based approach to identify molecular targets for tackling human pancreatic cancer stem cells.
BACKGROUND: Pancreatic adenocarcinoma (PAAD) is one of the most fatal human cancers, but effective therapies remain to be established. Cancer stem cells (CSCs) are highly resistant to anti-cancer drugs and a deeper understanding of their microenvironmental niche has been considered important to provide understanding and solutions to cancer eradication. However, as the CSC niche is composed of a wide variety of biological and physicochemical factors, the development of multidisciplinary tools that recapitulate their complex features is indispensable. Synthetic polymers have been studied as attractive biomaterials due to their tunable biofunctionalities, while hydrogelation technique further renders upon them a diversity of physical properties, making them an attractive tool for analysis of the CSC niche. METHODS: To develop innovative materials that recapitulate the CSC niche in pancreatic cancers, we performed polymer microarray analysis to identify niche-mimicking scaffolds that preferentially supported the growth of CSCs. The niche-mimicking activity of the identified polymers was further optimized by polyethylene glycol (PEG)-based hydrogelation. To reveal the biological mechanisms behind the activity of the optimized hydrogels towards CSCs, proteins binding onto the hydrogel were analyzed by liquid chromatography with tandem mass spectrometry (LC-MS/MS), and the potential therapeutic targets were validated by looking at gene expression and patients' outcome in the TCGA database. RESULTS: PA531, a heteropolymer composed of 2-methoxyethyl methacrylate (MEMA) and 2-(diethylamino)ethyl methacrylate (DEAEMA) (5.5:4.5) that specifically supports the growth and maintenance of CSCs was identified by polymer microarray screening using the human PAAD cell line KLM1. The polymer PA531 was converted into five hydrogels (PA531-HG1 to HG5) and developed to give an optimized scaffold with the highest CSC niche-mimicking activities. From this polymer that recapitulated CSC binding and control, the proteins fetuin-B and angiotensinogen were identified as candidate target molecules with clinical significance due to the correlation between gene expression levels and prognosis in PAAD patients and the proteins associated with the niche-mimicking polymer. CONCLUSION: This study screened for biofunctional polymers suitable for recapitulation of the pancreatic CSC niche and one hydrogel with high niche-mimicking abilities was successfully fabricated. Two soluble factors with clinical significance were identified as potential candidates for biomarkers and therapeutic targets in pancreatic cancers. Such a biomaterial-based approach could be a new platform in drug discovery and therapy development against CSCs, via targeting of their niche
The M 31 double nucleus probed with OASIS and HST. A natural m=1 mode?
We present observations with the adaptive optics assisted integral field
spectrograph OASIS of the M 31 double nucleus at a spatial resolution better
than 0.5 arcsec FWHM. These data are used to derive the two-dimensional stellar
kinematics within the central 2 arcsec. Archival WFPC2/HST images are revisited
to perform a photometric decomposition of the nuclear region. We also present
STIS/HST kinematics obtained from the archive. The luminosity distribution of
the central region is well separated into the respective contributions of the
bulge, the nucleus including P1 and P2, and the so-called UV peak. We then show
that the axis joining P1 and P2, the two local surface brightness maxima, does
not coincide with the kinematic major-axis, which is also the major-axis of the
nuclear isophotes (excluding P1). We also confirm that the velocity dispersion
peak is offset by ~ 0.2 arcsec from the UV peak, assumed to mark the location
of the supermassive black hole. The newly reduced STIS/HST velocity and
dispersion profiles are then compared to OASIS and other published kinematics.
We find significant offsets with previously published data. Simple parametric
models are then built to successfully reconcile all the available kinematics.
We finally interpret the observations using new N-body simulations. The nearly
keplerian nuclear disk of M31 is subject to a natural m=1 mode, with a very
slow pattern speed (3 km/s/pc for M_BH = 7 10^7~\Msun), that can be maintained
during more than a thousand dynamical times. The resulting morphology and
kinematics of the mode can reproduce the M~31 nuclear-disk photometry and mean
stellar velocity, including the observed asymmetries. It requires a central
mass concentration and a cold disk system representing between 20 and 40% of
its mass. Abridged..Comment: 21 pages. accepted for publication in A&
Raman Scattering Study of Ba-doped C60 with t1g States
Raman spectra are reported for Ba doped fullerides, BaxC60(x=3,4,and 6). The
lowest frequency Hg modes split into five components for Ba4C60 and Ba6C60 even
at room temperature, allowing us a quantitative analysis based on the
electron-phonon couping theory. For the superconducting Ba4C60, the density of
states at the Fermi energy was derived as 7 eV-1, while the total value of
electron-phonon coupling \lambda was found to be 1.0, which is comparable to
that of K3C60. The tangential Ag(2) mode, which is known as a sensitive probe
for the degree of charge transfer on C60 molecule, shows a remarkable shift
depending on the Ba concentration, being roughly consistent with the full
charge transfer from Ba to C60. An effect of hybridization between Ba and C60
\pi orbitals is also discussed.Comment: 15 pages, 6 figures submitted to Phys. Rev. B (December 1,1998
Role of the Small GTPase Rho3 in Golgi/Endosome Trafficking through Functional Interaction with Adaptin in Fission Yeast
BACKGROUND: We had previously identified the mutant allele of apm1(+) that encodes a homolog of the mammalian µ1A subunit of the clathrin-associated adaptor protein-1 (AP-1) complex, and we demonstrated the role of Apm1 in Golgi/endosome trafficking, secretion, and vacuole fusion in fission yeast. METHODOLOGY/PRINCIPAL FINDINGS: In the present study, we isolated rho3(+), which encodes a Rho-family small GTPase, an important regulator of exocystosis, as a multicopy-suppressor of the temperature-sensitive growth of the apm1-1 mutant cells. Overexpression of Rho3 suppressed the Cl(-) sensitivity and immunosuppressant sensitivity of the apm1-1 mutant cells. Overexpression of Rho3 also suppressed the fragmentation of vacuoles, and the accumulation of v-SNARE Syb1 in Golgi/endosomes and partially suppressed the defective secretion associated with apm1-deletion cells. Notably, electron microscopic observation of the rho3-deletion cells revealed the accumulation of abnormal Golgi-like structures, vacuole fragmentation, and accumulation of secretory vesicles; these phenotypes were very similar to those of the apm1-deletion cells. Furthermore, the rho3-deletion cells and apm1-deletion cells showed very similar phenotypic characteristics, including the sensitivity to the immunosuppressant FK506, the cell wall-damaging agent micafungin, Cl(-), and valproic acid. Green fluorescent protein (GFP)-Rho3 was localized at Golgi/endosomes as well as the plasma membrane and division site. Finally, Rho3 was shown to form a complex with Apm1 as well as with other subunits of the clathrin-associated AP-1 complex in a GTP- and effector domain-dependent manner. CONCLUSIONS/SIGNIFICANCE: Taken together, our findings reveal a novel role of Rho3 in the regulation of Golgi/endosome trafficking and suggest that clathrin-associated adaptor protein-1 and Rho3 co-ordinate in intracellular transport in fission yeast. To the best of our knowledge, this study provides the first evidence of a direct link between the small GTPase Rho and the clathrin-associated adaptor protein-1 in membrane trafficking
An online database of infant functional near infraRed spectroscopy studies: a community-augmented systematic review
Until recently, imaging the infant brain was very challenging. Functional Near InfraRed Spectroscopy (fNIRS) is a promising, relatively novel technique, whose use is rapidly expanding. As an emergent field, it is particularly important to share methodological knowledge to ensure replicable and robust results. In this paper, we present a community-augmented database which will facilitate precisely this exchange. We tabulated articles and theses reporting empirical fNIRS research carried out on infants below three years of age along several methodological variables. The resulting spreadsheet has been uploaded in a format allowing individuals to continue adding new results, and download the most recent version of the table. Thus, this database is ideal to carry out systematic reviews. We illustrate its academic utility by focusing on the factors affecting three key variables: infant attrition, the reliability of oxygenated and deoxygenated responses, and signal-to-noise ratios. We then discuss strengths and weaknesses of the DBIfNIRS, and conclude by suggesting a set of simple guidelines aimed to facilitate methodological convergence through the standardization of reports
Treadmill Experience Alters Treadmill Effects on Perceived Visual Motion
Information on ongoing body movements can affect the perception of ambiguous visual motion. Previous studies on “treadmill capture” have shown that treadmill walking biases the perception of ambiguous apparent motion in backward direction in accordance with the optic flow during normal walking, and that long-term treadmill experience changes the effect of treadmill capture. To understand the underlying mechanisms for these phenomena, we conducted Experiment 1 with non-treadmill runners and Experiment 2 with treadmill runners. The participants judged the motion direction of the apparent motion stimuli of horizontal gratings in front of their feet under three conditions: walking on a treadmill, standing on a treadmill, and standing on the floor. The non-treadmill runners showed the presence of downward bias only under the walking condition, indicating that ongoing treadmill walking but not the awareness of being on a treadmill biased the visual directional discrimination. In contrast, the treadmill runners showed no downward bias under any of the conditions, indicating that neither ongoing activity nor the awareness of spatial context produced perception bias. This suggests that the long-term repetitive experience of treadmill walking without optic flow induced the formation of a treadmill-specific locomotor-visual linkage to perceive the complex relationship between self and the environment
Identifying differential correlation in gene/pathway combinations
<p>Abstract</p> <p>Background</p> <p>An important emerging trend in the analysis of microarray data is to incorporate known pathway information a priori. Expression level "summaries" for pathways, obtained from the expression data for the genes constituting the pathway, permit the inclusion of pathway information, reduce the high dimensionality of microarray data, and have the power to elucidate gene-interaction dependencies which are not already accounted for through known pathway identification.</p> <p>Results</p> <p>We present a novel method for the analysis of microarray data that identifies joint differential expression in gene-pathway pairs. This method takes advantage of known gene pathway memberships to compute a summary expression level for each pathway as a whole. Correlations between the pathway expression summary and the expression levels of genes not already known to be associated with the pathway provide clues to gene interaction dependencies that are not already accounted for through known pathway identification, and statistically significant differences between gene-pathway correlations in phenotypically different cells (e.g., where the expression level of a single gene and a given pathway summary correlate strongly in normal cells but weakly in tumor cells) may indicate biologically relevant gene-pathway interactions. Here, we detail the methodology and present the results of this method applied to two gene-expression datasets, identifying gene-pathway pairs which exhibit differential joint expression by phenotype.</p> <p>Conclusion</p> <p>The method described herein provides a means by which interactions between large numbers of genes may be identified by incorporating known pathway information to reduce the dimensionality of gene interactions. The method is efficient and easily applied to data sets of ~10<sup>2 </sup>arrays. Application of this method to two publicly-available cancer data sets yields suggestive and promising results. This method has the potential to complement gene-at-a-time analysis techniques for microarray analysis by indicating relationships between pathways and genes that have not previously been identified and which may play a role in disease.</p
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