231 research outputs found
Molecular astronomy of cool stars and sub-stellar objects
The optical and infrared spectra of a wide variety of `cool' astronomical
objects including the Sun, sunspots, K-, M- and S-type stars, carbon stars,
brown dwarfs and extrasolar planets are reviewed. The review provides the
necessary astronomical background for chemical physicists to understand and
appreciate the unique molecular environments found in astronomy. The
calculation of molecular opacities needed to simulate the observed spectral
energy distributions is discussed
Ages for exoplanet host stars
Age is an important characteristic of a planetary system, but also one that
is difficult to determine. Assuming that the host star and the planets are
formed at the same time, the challenge is to determine the stellar age.
Asteroseismology provides precise age determination, but in many cases the
required detailed pulsation observations are not available. Here we concentrate
on other techniques, which may have broader applicability but also serious
limitations. Further development of this area requires improvements in our
understanding of the evolution of stars and their age-dependent
characteristics, combined with observations that allow reliable calibration of
the various techniques.Comment: To appear in "Handbook of Exoplanets", eds. Deeg, H.J. & Belmonte,
J.A, Springer (2018
Evaluation of Functional Erythropoietin Receptor Status in Skeletal Muscle In Vivo: Acute and Prolonged Studies in Healthy Human Subjects
BACKGROUND: Erythropoietin receptors have been identified in human skeletal muscle tissue, but downstream signal transduction has not been investigated. We therefore studied in vivo effects of systemic erythropoietin exposure in human skeletal muscle. METHODOLOGY/PRINCIPAL FINDINGS: The protocols involved 1) acute effects of a single bolus injection of erythropoietin followed by consecutive muscle biopsies for 1-10 hours, and 2) a separate study with prolonged administration for 16 days with biopsies obtained before and after. The presence of erythropoietin receptors in muscle tissue as well as activation of Epo signalling pathways (STAT5, MAPK, Akt, IKK) were analysed by western blotting. Changes in muscle protein profiles after prolonged erythropoietin treatment were evaluated by 2D gel-electrophoresis and mass spectrometry. The presence of the erythropoietin receptor in skeletal muscle was confirmed, by the M20 but not the C20 antibody. However, no significant changes in phosphorylation of the Epo-R, STAT5, MAPK, Akt, Lyn, IKK, and p70S6K after erythropoietin administration were detected. The level of 8 protein spots were significantly altered after 16 days of rHuEpo treatment; one isoform of myosin light chain 3 and one of desmin/actin were decreased, while three isoforms of creatine kinase and two of glyceraldehyd-3-phosphate dehydrogenase were increased. CONCLUSIONS/SIGNIFICANCE: Acute exposure to recombinant human erythropoietin is not associated by detectable activation of the Epo-R or downstream signalling targets in human skeletal muscle in the resting situation, whereas more prolonged exposure induces significant changes in the skeletal muscle proteome. The absence of functional Epo receptor activity in human skeletal muscle indicates that the long-term effects are indirect and probably related to an increased oxidative capacity in this tissue
Discovery of Nuclear-Encoded Genes for the Neurotoxin Saxitoxin in Dinoflagellates
Saxitoxin is a potent neurotoxin that occurs in aquatic environments worldwide.
Ingestion of vector species can lead to paralytic shellfish poisoning, a severe
human illness that may lead to paralysis and death. In freshwaters, the toxin is
produced by prokaryotic cyanobacteria; in marine waters, it is associated with
eukaryotic dinoflagellates. However, several studies suggest that saxitoxin is
not produced by dinoflagellates themselves, but by co-cultured bacteria. Here,
we show that genes required for saxitoxin synthesis are encoded in the nuclear
genomes of dinoflagellates. We sequenced >1.2×106 mRNA
transcripts from the two saxitoxin-producing dinoflagellate strains
Alexandrium fundyense CCMP1719 and A.
minutum CCMP113 using high-throughput sequencing technology. In
addition, we used in silico transcriptome analyses, RACE, qPCR
and conventional PCR coupled with Sanger sequencing. These approaches
successfully identified genes required for saxitoxin-synthesis in the two
transcriptomes. We focused on sxtA, the unique starting gene of
saxitoxin synthesis, and show that the dinoflagellate transcripts of
sxtA have the same domain structure as the cyanobacterial
sxtA genes. But, in contrast to the bacterial homologs, the
dinoflagellate transcripts are monocistronic, have a higher GC content, occur in
multiple copies, contain typical dinoflagellate spliced-leader sequences and
eukaryotic polyA-tails. Further, we investigated 28 saxitoxin-producing and
non-producing dinoflagellate strains from six different genera for the presence
of genomic sxtA homologs. Our results show very good agreement
between the presence of sxtA and saxitoxin-synthesis, except in
three strains of A. tamarense, for which we amplified
sxtA, but did not detect the toxin. Our work opens for
possibilities to develop molecular tools to detect saxitoxin-producing
dinoflagellates in the environment
Seasonal drought limits tree species across the Neotropics
AcceptedArticle in Press© 2016 Nordic Society Oikos.Within the tropics, the species richness of tree communities is strongly and positively associated with precipitation. Previous research has suggested that this macroecological pattern is driven by the negative effect of water-stress on the physiological processes of most tree species. This implies that the range limits of taxa are defined by their ability to occur under dry conditions, and thus in terms of species distributions predicts a nested pattern of taxa distribution from wet to dry areas. However, this 'dry-tolerance' hypothesis has yet to be adequately tested at large spatial and taxonomic scales. Here, using a dataset of 531 inventory plots of closed canopy forest distributed across the western Neotropics we investigated how precipitation, evaluated both as mean annual precipitation and as the maximum climatological water deficit, influences the distribution of tropical tree species, genera and families. We find that the distributions of tree taxa are indeed nested along precipitation gradients in the western Neotropics. Taxa tolerant to seasonal drought are disproportionally widespread across the precipitation gradient, with most reaching even the wettest climates sampled; however, most taxa analysed are restricted to wet areas. Our results suggest that the 'dry tolerance' hypothesis has broad applicability in the world's most species-rich forests. In addition, the large number of species restricted to wetter conditions strongly indicates that an increased frequency of drought could severely threaten biodiversity in this region. Overall, this study establishes a baseline for exploring how tropical forest tree composition may change in response to current and future environmental changes in this region.This paper is a product of the RAINFOR and ATDN networks and of ForestPlots.net
researchers (http://www.forestplots.net). RAINFOR and ForestPlots have been
supported by a Gordon and Betty Moore Foundation grant, the European Union’s
Seventh Framework Programme (283080, ‘GEOCARBON’; 282664,
‘AMAZALERT’); European Research Council (ERC) grant ‘Tropical Forests in the
Changing Earth System’ (T-FORCES), and Natural Environment Research Council
(NERC) Urgency Grant and NERC Consortium Grants ‘AMAZONICA’
(NE/F005806/1) and ‘TROBIT’ (NE/D005590/1). Additional funding for fieldwork was
provided by Tropical Ecology Assessment and Monitoring (TEAM) Network, a
collaboration among Conservation International, the Missouri Botanical Garden, the
Smithsonian Institution, and the Wildlife Conservation Society. A.E.M. receives a PhD
scholarship from the T-FORCES ERC grant. O.L.P. is supported by an ERC Advanced
Grant and a Royal Society Wolfson Research Merit Award. We thank Jon J. Lloyd,
Chronis Tzedakis, David Galbraith, and two anonymous reviewers for helpful
comments and Dylan Young for helping with the analyses. This study would not be
possible without the extensive contributions of numerous field assistants and rural
communities in the Neotropical forests. Alfredo Alarcón, Patricia Alvarez Loayza,
Plínio Barbosa Camargo, Juan Carlos Licona, Alvaro Cogollo, Massiel Corrales
Medina, Jose Daniel Soto, Gloria Gutierrez, Nestor Jaramillo Jarama, Laura Jessica
Viscarra, Irina Mendoza Polo, Alexander Parada Gutierrez, Guido Pardo, Lourens
Poorter, Adriana Prieto, Freddy Ramirez Arevalo, Agustín Rudas, Rebeca Sibler and
Javier Silva Espejo additionally contributed data to this study though their RAINFOR
participations. We further thank those colleagues no longer with us, Jean Pierre Veillon,
Samuel Almeida, Sandra Patiño and Raimundo Saraiva. Many data come from Alwyn
Gentry, whose example has inspired new generations to investigate the diversity of the
Neotropics
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